Relation between methanogenic archaea and methane production potential in selected natural wetland ecosystems across China

Biogeosciences

Volumn 8, Issue 2, 2011, Pages 329-338

  Liu, D Y ^a   Ding, W X ^a   Jia, Z J ^a   Cai, Z C ^a  

^a INSTITUTE OF GEOLOGY AND GEOPHYSICS   (China)

Author keywords

[No Author keywords available]

Indexed keywords

ABUNDANCE; METHANE; METHANOGENIC BACTERIUM; PEATLAND; SOIL CARBON; SOIL ORGANIC MATTER; SOIL PROFILE; SPATIAL VARIATION; WATER TABLE; WETLAND;

CHINA;

ARCHAEA; CAREX LASIOCARPA;

EID: 79951806234     PISSN: 17264170     EISSN: 17264189     Source Type: Journal    
DOI: 10.5194/bg-8-329-2011     Document Type: Article

References (62)

1. Altor, A. E. and Mitsch, W. J.: Methane flux from created riparian marshes: Relationship to intermittent versus continuous inundation and emergent macrop (Pubitemid 44879907)
2. 13C values of pore water methane in a Michigan peatland, Global Biogeochem. Cycl., 13, 475-484, 1999.
3. 2 reduction, Biogeochemistry, 62, 19-37, 2003. (Pubitemid 36141098)
4. Bartlett, K. B., Crill, P. M., Sass, R. L., Harriss, R. C., and Dise, N. B.: Methane emissions from tundra environments in the Yukon- Kuskokwim Delta, Alaska, J. Geophys. Res., 97, 16645-16660, 1992.
5. Bergman, I., Klarqvist, M., and Nilsson, M.: Seasonal variation in rates of methane production from peat of various botanical origins: effects of temperature and substrate quality, FEMS Microbiol. Ecol., 33, 181-189, 2000.
6. Bergman, I., Svensson, B. H., and Nilsson, M.: Regulation of methane production in a Swedish acid mire by pH, temperature and substrate, Soil Biol. Biochem., 30, 729-741, 1998. (Pubitemid 28259647)
7. Bloom, A. A., Palmer, P. I., Fraser, A., Reay, D. S. A., and Frankenber, C.: Large-scale controls of methanogenesis inferred from methane and gravity spaceborne data, Science, 327, 322-325, 2010.
8. 2 in the presence of rifampicin or by low concentrations of acetate, Geomicrobiol. J., 21, 433-443, 2004. (Pubitemid 39428514)
9. Bubier, J. L., Moore, T. R., and Roulet, N T.: Methane emissions from wetlands in the midboreal region of northern Ontario, Canada, Ecology, 74, 2240-2254. 1993.
10. Cadillo-Quiroz, H., Bräuer, S., Yashiro, E., Sun, C., Yavitt, J., and Zinder, S.: Vertical profiles of methanogenesis and methanogens in two contrasting acidic peatlands in central New York State, USA. Environ, Microbiol., 8, 1428-1440, 2006. (Pubitemid 44025335)
11. Cahyani, V. R., Murase, J., Ikeda, A., Taki, K., Asakawa, S., and Kimura, M.: Bacterial communities in iron mottles in the plow pan layer in a Japanese rice field: Estimation using PCR-DGGE and sequencing analyses, Soil Sci. Plant Nutr., 54, 711-717, 2008.
12. 4 in a northern Minnesota peatland, Global Biogeochem. Cycl., 14, 1095-1108, 2000. (Pubitemid 32281826)
13. Chen, H., Yao, S. P., Wu, N., Wang, Y. F., Luo, P., Tian, J. Q., Gao, Y. H., and Sun, G.: Determinants influencing seasonal variations of methane emissions from alpine wetlands in Zoige Plateau and their implications, J. Geophys. Res., 113, D12303, doi:10.1029/2006JD008072, 2008.
14. 2O emissions from Spartina alterniflora and Phragmites australis in experimental mesocosms, Chemosphere, 68, 420-427, 2007. (Pubitemid 46574876)
15. Chin, K. J. and Conrad, R.: Intermediary metabolism in methanogenic paddy soil and the influence of temperature, FEMS Microbiol. Ecol., 18, 85-102, 1995.
16. Chin, K. J., Lukow, T., and Conrad, R.: Effect of Temperature on structure and function of the methanogenic archaeal community in an anoxic rice field, soil, Appl. Environ. Microbiol., 65, 2341-2349, 1999.
17. Christensen, T. R.: Methane emission from Arctic tundra. Biogeo-chemistry, 21, 117-139, 1993. (Pubitemid 24395621)
18. 4 exchange in wetlands: a closed environment study, Biogeochemistry, 64, 337-354, 2003. (Pubitemid 37007876)
19. Colwell, F. S., Boyd, S., Delwiche, M. E., Reed, D. W., Phelps, T. J., and Newby, D. T.: Estimates of biogenic methane production rates in deep marine sediments at Hydrate Ridge, Cascadia Margin, Appl. Environ. Microbiol., 74, 3444-3452, 2008. (Pubitemid 351812799)
20. Crill, P., Bartlet, K. B., and Roulet, N.: Methane flux from boreal peatlands. Suo, 43, 173-182, 1992. (Pubitemid 24392842)
21. Ding, W. X., Cai, Z. C., and Tsuruta, H.: Plant species effects on methane emissions from freshwater marshes. Atmos. Environ., 39, 3199-3207, 2005. (Pubitemid 40732796)
22. Ding, W. X., Cai, Z. C., and Wang, D. X.: Preliminary budget of methane emissions from natural wetlands in China, Atmos. Environ., 38, 751-759, 2004.
23. Ding, W. X., Cai, Z. C., Tsuruta, H., and Li, X. P.: Effect of standing water depth on methane emissions from freshwater marshes in northeast China, Atmos. Environ., 36, 5149-5157, 2002.
24. Ding, W. X., Zhang, Y. H., and Cai, Z. C.: Impact of permanent inundation on methane emissions from a Spartina alterniflora coastal salt marsh, Atmos. Environ., 44, 3894-3900, 2010.
25. Duddleston, K. N. and Kinney, M. A.: Anaerobic microbial biogeochemistry in a northern bog: acetate as a dominant metabolic end product, Global Biogeochem. Cycl., 16, 1063, doi:10.1029/2001GB001402, 2002.
26. Duan, X. N., Wang, X. K., Chen, L., Mou, Y. J., and Ouyang, Z. Y.: Methane emission from aquatic vegetation zones of Wuliangsu lake, Inner Mongolia, Environ. Sci., 28, 455-459, 2007. (Pubitemid 46577164)
27. Freitag, T. E. and Prosser, J. I.: Correlation of methane production and functional gene transcriptional activity in a peat soil, Appl. Environ. Microbiol., 75, 6679-6687, 2009.
28. 4 production and oxidation, Biogeochemistry, 51, 91-112, 2000. (Pubitemid 30600118)
29. Galand, P. E., Fritze, H., and Yrjälä, K.: Microsite-dependent changes in methanogenic populations in a boreal oligotrophic fen, Environ. Microbiol., 5, 1133-1143, 2003. (Pubitemid 37417785)
30. Hargreaves, K. J., Fowler, D., Pitcairn, C. E. R., and Aurela, M.: Annual methane emission from Finnish mires estimated from eddy covariance campaign measurements, Theor. Appl. Climatol., 70, 203-213, 2001. (Pubitemid 33098831)
31. Harriss, R. C., Gorham, E., Sebacher, D. I., Bartlett, K. B., and Flebbe, P. A.: Methane flux from northern peatlands, Nature, 315, 652-654, 1985.
32. Horn, M. A., Matthies, C., Küsel K, Schramm, A., and Drake, H. L.: Hydrogenotrophic methanogenesis by moderately acid-tolerant methanogens of a methane-emitting acidic peat, Appl. Environ. Microbiol., 69, 74-83, 2003. (Pubitemid 36077459)
33. International Panel on Climate Change (IPCC): Climate change 2007: The physical science basis, Oxford Press, Cambridge, 996 pp., 2007.
34. Jia, Z. J., and Conrad, R.: Bacteria rather than Archaea dominate microbial ammonia oxidation in an agricultural soil. Environ. Microbiol., 11, 1658-1671, 2009.
35. Kettunen, A., Kaitala, V., Alm, J., Silvola, J., Nkyänen, H., and Martikainen, P. J.: Cross-correlation analysis of the dynamics of methane emissions from a boreal peatland, Global Biogeochem. Cycl., 10, 457-471, 1996.
36. Kim, S. Y., Lee, S. H., Freeman, C., Fenner, N., and Kang, H.: Comparative analysis of soil microbial communities and their responses to the short-term drought in bog, fen, and riparian wetlands, Soil Biol. Biochem., 40, 2874-2880, 2008.
37. Koelbener, A., Ström, L., Edwards, P. J., and Venterink, H. O.: Plant species from mesotrophic wetlands cause relatively high methane emissions from peat soil, Plant Soil, 326, 147-158, 2010.
38. Kotsyurbenko, O, R., Chin, K. J., Glagolev, M. V., and Stubner, S.: Acetoclastic and hydrogenotrophic methane production and methanogenic populations in an acidic West-Siberian peat bog, Environ. Microbiol., 6, 1159-1173, 2004. (Pubitemid 39408785)
39. Lu, R. K.: Methods for Soil Agrochemistry and Analysis, Chinese Agricultural Science and Technology Press, Beijing, 638 pp., 2000.
40. Melling, L., Hatano, R., and Goh, K. J.: Methane fluxes from three ecosystems in tropical peatland of Sarawak, Malaysia, Soil Biol. Biochem., 37, 1445-1453, 2005. (Pubitemid 40782620)
41. Moore, T. R. and Dalva, M.: The influence of temperature and water table position on carbon dioxide and methane emissions from laboratory columns of peatland soils, Eur. J. Soil Sci., 44, 651-664, 1993.
42. 4 emissions of boreal and arctic wetlands, Global Biogeochem. Cycl., 24, GB4009, 2010.
43. 4 emissions from arctic wetlands: effects of hydrological parameterization, Biogeosciences, 5, 111-121, doi:10.5194/bg-5-111-2008, 2008. (Pubitemid 351190326)
44. 4 emission from, a boreal mire, J. Ecol., 86, 261-268, 1998. (Pubitemid 28236022)
45. Shannon, R. D. and White. J. R.: The effects of spatial and temporal variations in acetate and sulfate on methane cycling in two Michigan peatlands, Limnol. Oceaogr., 41, 435-443, 1996. (Pubitemid 26311183)
46. Ström, L., Mastepanov, M. T., and Christensen, R.: Species-specific effects of vascular plants on carbon turnover and methane emissions from wetlands, Biogeochemistry, 75, 65-82, 2005. (Pubitemid 41597352)
47. Thauer, R. K.: Biochemistry of methanogenesis: a tribute to Marjory Stephenson, Microbiology, 144, 2377-2406, 1998.
48. 4 flux from a Phragmites australis wetland in the Min River estuary, Acta Sci. Circumst., 29, 207-216, 2009.
49. Walter, B. P., Heimann, M., and Matthews, E.: Modeling modern methane emissions from natural wetlands 1. Model description and results, J. Geophys. Res., 106, 34189-34206, 2001a.
50. Walter, B. P., Heimann, M., and Matthews, E.: Modeling modern methane emissions from natural wetlands 2. Interannual variations 1982-1993, J. Geophys. Res., 106, 34207-34219, 2001b.
51. Walter, B. P. and Heimann, M.: A process-based, climate-sensitive model to derive methane emissions from natural wetlands: Application to five wetland sites, sensitivity to model parameters, and climate, Global Biogeochem. Cycl., 14, 745-765, 2000.
52. Wang, Z. P. and Han, X. G.: Diurnal variation in methane emissions in relation to plants and environmental variables in the Inner Mongolia marshes, Atmos. Environ., 39, 6295-6305, 2005.
53. Watanabe, T., Cahyani, V. R., Murase, J., Ishibashi, E., Kimura, M., and Asakawa, S.: Methanogenic archaeal communities developed in paddy fields in the Kojima Bay polder, estimated by denaturing gradient gel electrophoresis, real-time PCR and sequencing analyses, Soil Sci. Plant Nutr., 55, 73-79, 2009.
54. Watanabe, T., Kimura, M., and Asakawa, S.: Community structure of methanogenic archaea in paddy field soil under double cropping (rice-wheat), Soil Biol. Biochem., 38, 1264-1274, 2006.
55. Watanabe, T., Kimura, M., and Asakawa, S.: Dynamics of methanogenic archaeal communities based on rRNA analysis and their relation to methanogenic activity in Japanese paddy field soils, Soil Biol. Biochem., 39, 2877-2887, 2007. (Pubitemid 47238917)
56. Westermann, P.: Temperature regulation of methanogenesis in wetlands. Chemosphere, 26, 321-328, 1993. (Pubitemid 23087852)
57. Whalen, S. C. and Reeburgh, W. S.: Interannual variations in tundra methane emission: A 4-year time series at fixed sites, Global Biogeochem. Cycl., 6, 139-159, 1992.
58. Whiting, G. J. and Chanton, J. P.: Primary production control of methane emission from wetlands, Nature, 364, 794-795, 1993. (Pubitemid 24395300)
59. Yavitt, J. B, Lang, G. E., and Downey, D. M.: Potential methane production and methane oxidation rates in peatland ecosystems of the Appalachian Mountains, United States, Global Biogeochem. Cycl., 2, 253-268, 1988.
60. Zhang, G. S., Jiang, N., Liu, X. L., and Dong, X. Z.: Methanogenesis from methanol at low temperatures by a novel psychrophilic methanogen, "methanolobus psychrophilus" sp. nov., prevalent in Zoige wetland of the Tibetan plateau, Appl. Environ. Microbiol., 74, 6114-6120, 2008.
61. Zhao, K. Y.: Mires in China. Science Press, Beijing, 718 pp., 1999.
62. Zhu, X. J.: The explanations of formation and named time about Hongze, J. Huaiyin Teachers College, 3, 125-126, 1991.