-
2
-
-
77249177892
-
Programing the formation of DNA and PNA quadruplexes by π-π-stacking interactions
-
S. Saha, J. Cai, D. Eiler, and A.D. Hamilton Programing the formation of DNA and PNA quadruplexes by π-π-stacking interactions Chem. Commun. 46 2010 1685 1687 For a recent example see:
-
(2010)
Chem. Commun.
, vol.46
, pp. 1685-1687
-
-
Saha, S.1
Cai, J.2
Eiler, D.3
Hamilton, A.D.4
-
3
-
-
34250682662
-
Guanines are a quartet's best friend: Impact of base substitutions on the kinetics and stability of tetramolecular quadruplexes
-
DOI 10.1093/nar/gkm111
-
J. Gros, F. Rosu, S. Amrane, A. De Cian, V. Gabelica, L. Lacroix, and J.-L. Mergny Guanines are a quartet's best friend: impact of base substitutions on the kinetics and stabilit (Pubitemid 47073644)
-
(2007)
Nucleic Acids Research
, vol.35
, Issue.9
, pp. 3064-3075
-
-
Gros, J.1
Rosu, F.2
Amrane, S.3
De Cian, A.4
Gabelica, V.5
Lacroix, L.6
Mergny, J.-L.7
-
4
-
-
45549086578
-
8-Amino guanine accelerates tetramolecular G-quadruplex formation
-
DOI 10.1039/b801221k
-
J. Gros, A. Avino, J. Lopez de la Osa, C. Gonzalez, L. Lacroix, A. Perez, M. Orozco, R. Eritja, and J.-L. Mergny 8-Amino guanine accelerates tetramolecular G-quadruplex formation Chem. Commun. 2008 2926 2928 (Pubitemid 351862070)
-
(2008)
Chemical Communications
, Issue.25
, pp. 2926-2928
-
-
Gros, J.1
Avino, A.2
Lopez De La Osa, J.3
Gonzalez, C.4
Lacroix, L.5
Perez, A.6
Orozco, M.7
Eritja, R.8
Mergny, J.-L.9
-
5
-
-
0030007499
-
Synthesis, structure and thermodynamic properties of 8-methylguanine- containing oligonucleotides: Z-DNA under physiological salt conditions
-
DOI 10.1093/nar/24.7.1272
-
H. Sugiyama, K. Kawai, A. Matsunaga, K. Fujimoto, I. Saito, H. Robinson, and A.H.-J. Wang Synthesis, structure and thermodynamic properties of 8-methylguanine-containing oligonucleotides: Z-DNA under physiological salt conditions Nucleic Acids Res. 24 1996 1272 1278 (Pubitemid 26102677)
-
(1996)
Nucleic Acids Research
, vol.24
, Issue.7
, pp. 1272-1278
-
-
Sugiyama, H.1
Kawai, K.2
Matsunaga, A.3
Fujimoto, K.4
Saito, I.5
Robinson, H.6
Wang, A.H.-J.7
-
6
-
-
0345099565
-
2 act cooperatively to promote a left-handed helix under physiological salt conditions
-
DOI 10.1093/nar/gkg893
-
2 act cooperatively to promote a left-handed helix under physiological salt conditions Nucleic Acids Res. 23 2003 6986 6995 (Pubitemid 37508805)
-
(2003)
Nucleic Acids Research
, vol.31
, Issue.23
, pp. 6986-6995
-
-
Cherrak, I.1
Mauffret, O.2
Santamaria, F.3
Hocquet, A.4
Ghomi, M.5
Rayner, B.6
Fermandjian, S.7
-
8
-
-
0012908458
-
8-substituted oligodeoxynucleotides with enhanced thrombin inhibitory activity in vitro and in vivo
-
DOI 10.1021/jm970434d
-
G.-X. He, S.H. Krawczyk, S. Swaminathan, R.G. Shea, J.P. Dougherty, T. Terhorst, V.S. Law, L.C. Griffin, S. Coutre, and N. Bischofberger N2- and C8-Substituted oligodeoxynucleotides with enhanced thrombin inhibitory activity in vitro and in vivo J. Med. Chem. 41 1998 2234 2242 (Pubitemid 28285725)
-
(1998)
Journal of Medicinal Chemistry
, vol.41
, Issue.13
, pp. 2234-2242
-
-
He, G.-X.1
Krawczyk, S.H.2
Swaminathan, S.3
Shea, R.G.4
Dougherty, J.P.5
Terhorst, T.6
Law, V.S.7
Griffin, L.C.8
Coutre, S.9
Bischofberger, N.10
-
9
-
-
0029079495
-
Structure-activity study of oligodeoxynucleotides which inhibit thrombin
-
S.H. Krawczyk, N. Bischofberger, L.C. Griffin, V.S. Law, R.G. Shea, and S. Swaminathan Structure-activity study of oligodeoxynucleotides which inhibit thrombin Nucleosides Nucleotides 14 1995 1109 1116
-
(1995)
Nucleosides Nucleotides
, vol.14
, pp. 1109-1116
-
-
Krawczyk, S.H.1
Bischofberger, N.2
Griffin, L.C.3
Law, V.S.4
Shea, R.G.5
Swaminathan, S.6
-
10
-
-
33644858313
-
Formation of the G-quadruplex and i-motif structures in retinoblastoma susceptibility genes (Rb)
-
DOI 10.1093/nar/gkj485
-
Y. Xu, and H. Sugiyama Formation of the G-quadruplex and i-motif structures in retinoblastoma susceptibility genes (Rb) Nucleic Acids Res. 34 2006 949 954 (Pubitemid 43380678)
-
(2006)
Nucleic Acids Research
, vol.34
, Issue.3
, pp. 949-954
-
-
Xu, Y.1
Sugiyama, H.2
-
11
-
-
27744511560
-
8-Methyl-2′-deoxyguanosine incorporation into parallel DNA quadruplex structures
-
DOI 10.1093/nar/gki924
-
A. Virgilio, V. Esposito, A. Randazzo, L. Mayol, and A. Galeone 8-Methyl-2′-deoxyguanosine incorporation into parallel DNA quadruplex structures Nucleic Acids Res. 33 2005 6188 6195 (Pubitemid 41742556)
-
(2005)
Nucleic Acids Research
, vol.33
, Issue.19
, pp. 6188-6195
-
-
Virgilio, A.1
Esposito, V.2
Randazzo, A.3
Mayol, L.4
Galeone, A.5
-
12
-
-
0029845883
-
Synthesis, miscoding specificity, and thermodynamic stability of oligodeoxynucleotide containing 8-methyl-2'-deoxyguanosine
-
DOI 10.1021/tx9601059
-
K. Kohda, H. Tsunomoto, Y. Minoura, K. Tanabe, and S. Shibutani Synthesis, miscoding specificity, and thermodynamic stability of oligodeoxynucleotide containing 8-methyl-2′-deoxyguanosine Chem. Res. Toxicol. 9 1996 1278 1284 (Pubitemid 26403832)
-
(1996)
Chemical Research in Toxicology
, vol.9
, Issue.8
, pp. 1278-1284
-
-
Kohda, K.1
Tsunomoto, H.2
Minoura, Y.3
Tanabe, K.4
Shibutani, S.5
-
13
-
-
27144440078
-
Thermal difference spectra: A specific signature for nucleic acid structures
-
J.-L. Mergny, J. Li, L. Lacroix, S. Amrane, and J.B. Chaires Thermal difference spectra: a specific signature for nucleic acid structures Nucleic Acids Res. 33 2005 e138/1-e138/6
-
(2005)
Nucleic Acids Res.
, vol.33
-
-
Mergny, J.-L.1
Li, J.2
Lacroix, L.3
Amrane, S.4
Chaires, J.B.5
-
14
-
-
13744249293
-
Kinetics of tetramolecular quadruplex
-
J.-L. Mergny, A. De Cian, A. Ghelab, B. Sacc, and L. Lacroix Kinetics of tetramolecular quadruplex Nucleic Acids Res. 33 2005 81 94
-
(2005)
Nucleic Acids Res.
, vol.33
, pp. 81-94
-
-
Mergny, J.-L.1
De Cian, A.2
Ghelab, A.3
Sacc, B.4
Lacroix, L.5
-
15
-
-
0026951903
-
Gradient-tailored excitation for singlequantum NMR spectroscopy of aqueous solutions
-
M. Piotto, V. Saudek, and V.J. Sklenar Gradient-tailored excitation for singlequantum NMR spectroscopy of aqueous solutions J. Biomol. NMR 2 1992 661 665
-
(1992)
J. Biomol. NMR
, vol.2
, pp. 661-665
-
-
Piotto, M.1
Saudek, V.2
Sklenar, V.J.3
-
16
-
-
0343359244
-
Investigation of exchange processes by two-dimensional NMR spectroscopy
-
J. Jeener, B. Meier, H.P. Bachmann, and R.R. Ernst Investigation of exchange processes by two-dimensional NMR spectroscopy J. Chem. Phys. 71 1979 4546 4553
-
(1979)
J. Chem. Phys.
, vol.71
, pp. 4546-4553
-
-
Jeener, J.1
Meier, B.2
Bachmann, H.P.3
Ernst, R.R.4
-
17
-
-
0344448273
-
Coherence transfer by isotropic mixing: Application to proton correlation spectroscopy
-
L. Braunschweiler, and R.R. Ernst Coherence transfer by isotropic mixing: application to proton correlation spectroscopy J. Magn. Reson. 53 1983 521 528
-
(1983)
J. Magn. Reson.
, vol.53
, pp. 521-528
-
-
Braunschweiler, L.1
Ernst, R.R.2
-
18
-
-
0021114895
-
Application of phase sensitive two-dimensional correlated spectroscopy (COSY) for measurements of proton-proton spin-spin coupling constants in proteins
-
D. Marion, and K. Wuthrich Application of phase sensitive two-dimensional correlated spectroscopy (COSY) for measurements of proton-proton spin-spin coupling constants in proteins Biochem. Biophys. Res. Commun. 113 1983 967 974
-
(1983)
Biochem. Biophys. Res. Commun.
, vol.113
, pp. 967-974
-
-
Marion, D.1
Wuthrich, K.2
-
19
-
-
0029011701
-
A second generation force field for the simulation of proteins, nucleic acids, and organic molecules
-
W.D. Cornell, P. Cieplack, C.I. Bayly, I.R. Gould, K.M. Merz, D.M. Ferguson, D.C. Spellmeyer, T. Fox, J.W. Caldwell, and P.A. Kollman A second generation force field for the simulation of proteins, nucleic acids, and organic molecules J. Am. Chem. Soc. 117 1995 5179 5197
-
(1995)
J. Am. Chem. Soc.
, vol.117
, pp. 5179-5197
-
-
Cornell, W.D.1
Cieplack, P.2
Bayly, C.I.3
Gould, I.R.4
Merz, K.M.5
Ferguson, D.M.6
Spellmeyer, D.C.7
Fox, T.8
Caldwell, J.W.9
Kollman, P.A.10
-
20
-
-
0021757436
-
A new force field for molecular mechanical simulation of nucleic acids and proteins
-
S.J. Weiner, P.A. Kollman, D.A. Case, U.C. Singh, C. Ghio, G. Alagona, S. Profeta, and P.J. Weiner A new force field for molecular mechanical simulation of nucleic acids and proteins J. Am. Chem. Soc. 106 1984 765 784 (Pubitemid 14548426)
-
(1984)
Journal of the American Chemical Society
, vol.106
, Issue.3
, pp. 765-784
-
-
Weiner Scott, J.1
Kollman Peter, A.2
Case David, A.3
Singh U.Chandra4
Alagona Giuliano5
Profeta Jr., S.6
Weiner Paul7
Ghio Caterina8
-
21
-
-
0032508468
-
Following G-quartet formation by UV-spectroscopy
-
DOI 10.1016/S0014-5793(98)01043-6, PII S0014579398010436
-
J.-L. Mergny, A.T. Phan, and L. Lacroix Following G-quartet formation by UV-spectroscopy FEBS Lett. 435 1998 74 78 (Pubitemid 28432018)
-
(1998)
FEBS Letters
, vol.435
, Issue.1
, pp. 74-78
-
-
Mergny, J.-L.1
Phan, A.-T.2
Lacroix, L.3
-
22
-
-
77953192496
-
A non-empirical chromophoric interpretation of CD spectra of DNA G-quadruplex structures
-
S. Masiero, R. Trotta, S. Pieraccini, S. De Tito, R. Perone, A. Randazzo, and G.P. Spada A non-empirical chromophoric interpretation of CD spectra of DNA G-quadruplex structures Org. Biomol. Chem. 8 2010 2683 2692
-
(2010)
Org. Biomol. Chem.
, vol.8
, pp. 2683-2692
-
-
Masiero, S.1
Trotta, R.2
Pieraccini, S.3
De Tito, S.4
Perone, R.5
Randazzo, A.6
Spada, G.P.7
-
25
-
-
0026687030
-
4) form parallel-stranded potassium cation stabilized G-quadruplexes with anti glycosidic torsion angles in solution
-
4) form parallel-stranded potassium cation stabilized G-quadruplexes with anti glycosidic torsion angles in solution Biochemistry 31 1992 8112 8119
-
(1992)
Biochemistry
, vol.31
, pp. 8112-8119
-
-
Wang, Y.1
Patel, D.J.2
-
26
-
-
0027750779
-
Solution structure of a parallel-stranded G-quadruplex DNA
-
DOI 10.1006/jmbi.1993.1668
-
Y. Wang, and D.J. Patel Solution structure of a parallel-stranded G-quadruplex DNA J. Mol. Biol. 234 1993 1171 1183 (Pubitemid 24027245)
-
(1993)
Journal of Molecular Biology
, vol.234
, Issue.4
, pp. 1171-1183
-
-
Wang, Y.1
Patel, D.J.2
-
28
-
-
0033564067
-
NMR observation of T-tetrads in a parallel stranded DNA quadruplex formed by Saccharomyces cerevisiae telomere repeats
-
P.K. Patel, and R.V. Hosur NMR observation of T-tetrads in a parallel stranded DNA quadruplex formed by Saccharomyces cerevisiae telomere repeats Nucleic Acids Res. 27 1999 2457 2464
-
(1999)
Nucleic Acids Res.
, vol.27
, pp. 2457-2464
-
-
Patel, P.K.1
Hosur, R.V.2
-
29
-
-
0027918585
-
Solution structure of the human telomeric repeat d[AG3(T2AG3)3] G-tetraplex
-
DOI 10.1016/0969-2126(93)90015-9
-
3] G-tetraplex Structure 1 1993 263 282 (Pubitemid 2031126)
-
(1993)
Structure
, vol.1
, Issue.4
, pp. 263-282
-
-
Wang Yong1
Patel, D.J.2
-
31
-
-
39749116244
-
Measured and calculated CD spectra of G-quartets stacked with the same or opposite polarities
-
DOI 10.1002/chir.20455
-
D.M. Gray, J.-D. Wen, C.W. Gray, R. Repges, C. Repges, G. Raabe, and J. Fleischhauer Measured and calculated CD spectra of G-quartets stacked with the same or opposite polarities Chirality 20 2008 431 440 (Pubitemid 351303984)
-
(2008)
Chirality
, vol.20
, Issue.3-4
, pp. 431-440
-
-
Gray, D.M.1
Wen, J.-D.2
Gray, C.W.3
Repges, R.4
Repges, C.5
Raabe, G.6
Fleischhauer, J.7
-
32
-
-
0027983025
-
Combinatorially selected guanosine-quartet structure is a potent inhibitor of human immunodeficiency virus envelope-mediated cell fusion
-
J.R. Wyatt, T.A. Vickers, J.L. Roberson, R.W. Buckheit Jr., T. Klimkait, E. DeBaets, P.W. Davis, B. Rayner, J.L. Imbach, and D.J. Ecker Combinatorially selected guanosine-quartet structure is a potent inhibitor of human immunodeficiency virus envelope-mediated cell fusion Proc. Nat. Acad. Sci. USA 91 1994 1356 1360 (Pubitemid 24059010)
-
(1994)
Proceedings of the National Academy of Sciences of the United States of America
, vol.91
, Issue.4
, pp. 1356-1360
-
-
Wyatt, J.R.1
Vickers, T.A.2
Roberson, J.L.3
Buckheit Jr., R.W.4
Klimkait, T.5
Debaets, E.6
Davis, P.W.7
Rayner, B.8
Imbach, J.L.9
Ecker, D.J.10
-
33
-
-
0029044169
-
Novel guanosine quartet structure binds to the HIV envelope and inhibits envelope mediated cell fusion
-
D.J. Ecker, J.R. Wyatt, T.A. Vickers, R. Buckheit, J. Roberson, and J.-L. Imbach Novel guanosine quartet structure binds to the HIV envelope and inhibits envelope mediated cell fusion Nucleosides Nucleotides 14 1995 1117 1127
-
(1995)
Nucleosides Nucleotides
, vol.14
, pp. 1117-1127
-
-
Ecker, D.J.1
Wyatt, J.R.2
Vickers, T.A.3
Buckheit, R.4
Roberson, J.5
Imbach, J.-L.6
-
34
-
-
0034597025
-
2-Methylation of 2′-deoxyguanosines enhances stability of parallel G-quadruplex and anti-HIV-1.activity
-
2-Methylation of 2′-deoxyguanosines enhances stability of parallel G-quadruplex and anti-HIV-1.activity Bioorg. Med. Chem. Lett. 10 2000 2213 2216 and references cited therein
-
(2000)
Bioorg. Med. Chem. Lett.
, vol.10
, pp. 2213-2216
-
-
Koizumi, M.1
Akahori, K.2
Ohmine, T.3
Tsutsumi, S.4
Sone, J.5
Kosaka, T.6
Kaneko, M.7
Kimura, S.8
Shimada, K.9
-
35
-
-
34547227651
-
5′-Modified G-quadruplex forming oligonucleotides endowed with anti-HIV activity: Synthesis and biophysical properties
-
DOI 10.1021/bc070062f
-
J. D'Onofrio, L. Petraccone, E. Erra, L. Martino, G. Di Fabio, L. De Napoli, C. Giancola, and D. Montesarchio 5′-Modified G-quadruplex forming oligonucleotides endowed with anti-HIV activity: synthesis and biophysical properties Bioconjug. Chem. 18 2007 1194 1204 (Pubitemid 47122642)
-
(2007)
Bioconjugate Chemistry
, vol.18
, Issue.4
, pp. 1194-1204
-
-
D'Onofrio, J.1
Petraccone, L.2
Erra, E.3
Martino, L.4
Di Fabio, G.5
De Napoli, L.6
Giancola, C.7
Montesarchio, D.8
-
36
-
-
41149164708
-
Synthesis, biophysical characterization, and anti-HIV activity of glyco-conjugated G-quadruplex-forming oligonucleotides
-
DOI 10.1021/bc7003395
-
J. D'Onofrio, L. Petraccone, L. Martino, G. Di Fabio, A. Iadonisi, J. Balzarini, C. Giancola, and D. Montesarchio Synthesis, biophysical characterization, and anti-hiv activity of glyco-conjugated G-quadruplex-forming oligonucleotides Bioconjug. Chem. 19 2008 607 616 (Pubitemid 351431391)
-
(2008)
Bioconjugate Chemistry
, vol.19
, Issue.3
, pp. 607-616
-
-
D'Onofrio, J.1
Petraccone, L.2
Martino, L.3
Di Fabio, G.4
Iadonisi, A.5
Baizarini, J.6
Giancola, C.7
Montesarchio, D.8
|