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Volumn 35, Issue 3, 2011, Pages 399-408

Characterization and expression studies of Gaduscidin-1 and Gaduscidin-2; paralogous antimicrobial peptide-like transcripts from Atlantic cod (Gadus morhua)

Author keywords

Antimicrobial peptide; Atlantic cod; Gaduscidin; Gene expression; Paralogue

Indexed keywords

ADENOSINE PHOSPHATE; BACTERIAL ANTIGEN; COMPLEMENTARY DNA; GADUSCIDIN 1 PROTEIN; GADUSCIDIN 2 PROTEIN; POLYPEPTIDE ANTIBIOTIC AGENT; UNCLASSIFIED DRUG;

EID: 79151474912     PISSN: 0145305X     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.dci.2010.11.010     Document Type: Article
Times cited : (49)

References (31)
  • 1
    • 70349083390 scopus 로고    scopus 로고
    • Genetic variation in hepcidin expression and its implications for phenotypic differences in iron metabolism
    • Bayele H.K., Srai S.K.S. Genetic variation in hepcidin expression and its implications for phenotypic differences in iron metabolism. Haematologica 2009, 94(9):1185-1188.
    • (2009) Haematologica , vol.94 , Issue.9 , pp. 1185-1188
    • Bayele, H.K.1    Srai, S.K.S.2
  • 3
    • 76749160808 scopus 로고    scopus 로고
    • Antimicrobial peptides (AMP) with antiviral activity against fish nodavirus
    • Chia T.-J., Wu Y.-C., Chen J.-Y., Chi S.-C. Antimicrobial peptides (AMP) with antiviral activity against fish nodavirus. Fish Shellfish Immunol. 2009, 28(3):434-439.
    • (2009) Fish Shellfish Immunol. , vol.28 , Issue.3 , pp. 434-439
    • Chia, T.-J.1    Wu, Y.-C.2    Chen, J.-Y.3    Chi, S.-C.4
  • 4
    • 0030957967 scopus 로고    scopus 로고
    • Isolation and characterization of pleurocidin, an antimicrobial peptide in the skin secretions of winter flounder
    • Cole A.M., Weis P., Diamond G. Isolation and characterization of pleurocidin, an antimicrobial peptide in the skin secretions of winter flounder. J. Biol. Chem. 1997, 272(18):12008-12013.
    • (1997) J. Biol. Chem. , vol.272 , Issue.18 , pp. 12008-12013
    • Cole, A.M.1    Weis, P.2    Diamond, G.3
  • 5
    • 0033915249 scopus 로고    scopus 로고
    • Characterization of a fish antimicrobial peptide: gene expression, subcellular localization, and spectrum of activity
    • Cole A.M., Darouiche R.O., Legarda D., Connell N., Diamond G. Characterization of a fish antimicrobial peptide: gene expression, subcellular localization, and spectrum of activity. Antimicrob. Agents Chemother. 2000, 44(8):2039-2045.
    • (2000) Antimicrob. Agents Chemother. , vol.44 , Issue.8 , pp. 2039-2045
    • Cole, A.M.1    Darouiche, R.O.2    Legarda, D.3    Connell, N.4    Diamond, G.5
  • 6
    • 0141447390 scopus 로고    scopus 로고
    • Identification, structure and differential expression of novel pleurocidins clustered on the genome of the winter flounder, Pseudopleuronectes americanus (Walbaum)
    • Douglas S.E., Patrzykat A., Pytyck J., Gallant J.W. Identification, structure and differential expression of novel pleurocidins clustered on the genome of the winter flounder, Pseudopleuronectes americanus (Walbaum). Eur. J. Biochem. 2003, 270(18):3720-3730.
    • (2003) Eur. J. Biochem. , vol.270 , Issue.18 , pp. 3720-3730
    • Douglas, S.E.1    Patrzykat, A.2    Pytyck, J.3    Gallant, J.W.4
  • 7
    • 66349100829 scopus 로고    scopus 로고
    • Identification and analysis of differentially expressed genes in immune tissues of Atlantic cod stimulated with formalin-killed, atypical Aeromonas salmonicida
    • Feng C.Y., Johnson S.C., Hori T.S., Rise M., Hall J.R., Gamperl A.K., Hubert S., Kimball J., Bowman S., Rise M.L. Identification and analysis of differentially expressed genes in immune tissues of Atlantic cod stimulated with formalin-killed, atypical Aeromonas salmonicida. Physiol. Genomics 2009, 37(3):149-163.
    • (2009) Physiol. Genomics , vol.37 , Issue.3 , pp. 149-163
    • Feng, C.Y.1    Johnson, S.C.2    Hori, T.S.3    Rise, M.4    Hall, J.R.5    Gamperl, A.K.6    Hubert, S.7    Kimball, J.8    Bowman, S.9    Rise, M.L.10
  • 8
    • 77949689663 scopus 로고    scopus 로고
    • Atlantic cod piscidin and its diversification through positive selection
    • Fernandes J.M.O., Ruangsri J., Kiron V. Atlantic cod piscidin and its diversification through positive selection. PLoS One 2010, 5(3):e9501.
    • (2010) PLoS One , vol.5 , Issue.3
    • Fernandes, J.M.O.1    Ruangsri, J.2    Kiron, V.3
  • 9
    • 34249858459 scopus 로고    scopus 로고
    • AMPer: a database and an automated discovery tool for antimicrobial peptides
    • Fjell C.D., Hancock R.E.W., Cherkasov A. AMPer: a database and an automated discovery tool for antimicrobial peptides. Bioinformatics 2007, 23(9):1148-1155.
    • (2007) Bioinformatics , vol.23 , Issue.9 , pp. 1148-1155
    • Fjell, C.D.1    Hancock, R.E.W.2    Cherkasov, A.3
  • 10
    • 77649130969 scopus 로고    scopus 로고
    • Heat-shock responsive genes identified and validated in Atlantic cod (Gadus morhua) liver, head kidney and skeletal muscle using genomic techniques
    • 72
    • Hori T.S., Gamperl A.K., Afonso L.O., Johnson S.C., Hubert S., Kimball J., Bowman S., Rise M.L. Heat-shock responsive genes identified and validated in Atlantic cod (Gadus morhua) liver, head kidney and skeletal muscle using genomic techniques. BMC Genomics 2010, 11. 72.
    • (2010) BMC Genomics , vol.11
    • Hori, T.S.1    Gamperl, A.K.2    Afonso, L.O.3    Johnson, S.C.4    Hubert, S.5    Kimball, J.6    Bowman, S.7    Rise, M.L.8
  • 11
    • 0037293964 scopus 로고    scopus 로고
    • Purification and characterization of three isoforms of chrysophsin, a novel antimicrobial peptide in the gills of the red sea bream, Chrysophrys major
    • Iijima N., Tanimoto N., Emoto Y., Morita Y., Uematsu K., Murakami T., Nakai T. Purification and characterization of three isoforms of chrysophsin, a novel antimicrobial peptide in the gills of the red sea bream, Chrysophrys major. Eur. J. Biochem. 2003, 270(4):675-686.
    • (2003) Eur. J. Biochem. , vol.270 , Issue.4 , pp. 675-686
    • Iijima, N.1    Tanimoto, N.2    Emoto, Y.3    Morita, Y.4    Uematsu, K.5    Murakami, T.6    Nakai, T.7
  • 13
    • 25444458848 scopus 로고    scopus 로고
    • AutoFACT: an automatic functional annotation and classification tool
    • 151
    • Koski L.B., Gray M.W., Lang B.F., Burger G. AutoFACT: an automatic functional annotation and classification tool. BMC Bioinformatics 2005, 6. 151.
    • (2005) BMC Bioinformatics , vol.6
    • Koski, L.B.1    Gray, M.W.2    Lang, B.F.3    Burger, G.4
  • 14
    • 61349169039 scopus 로고    scopus 로고
    • AMPed up immunity: how antimicrobial peptides have multiple roles in immune defense
    • Lai Y., Gallo R.L. AMPed up immunity: how antimicrobial peptides have multiple roles in immune defense. Trends Immunol. 2009, 30(3):131-141.
    • (2009) Trends Immunol. , vol.30 , Issue.3 , pp. 131-141
    • Lai, Y.1    Gallo, R.L.2
  • 16
    • 0035710746 scopus 로고    scopus 로고
    • Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) method
    • Livak K.J., Schmittgen T.D. Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) method. Methods 2001, 25(4):402-408.
    • (2001) Methods , vol.25 , Issue.4 , pp. 402-408
    • Livak, K.J.1    Schmittgen, T.D.2
  • 17
    • 34247117757 scopus 로고    scopus 로고
    • Cationic host defence peptides: innate immune regulatory peptides as a novel approach for treating infections
    • Mookherjee N., Hancock R.E.W. Cationic host defence peptides: innate immune regulatory peptides as a novel approach for treating infections. Cell. Mol. Life Sci. 2007, 64(7-8):922-933.
    • (2007) Cell. Mol. Life Sci. , vol.64 , Issue.7-8 , pp. 922-933
    • Mookherjee, N.1    Hancock, R.E.W.2
  • 18
    • 49649112856 scopus 로고    scopus 로고
    • The antimicrobial peptides piscidins are stored in the granules of professional phagocytic granulocytes of fish and are delivered to the bacteria-containing phagosome upon phagocytosis
    • Mulero I., Noga E.J., Meseguer J., Garcia-Ayala A., Mulero V. The antimicrobial peptides piscidins are stored in the granules of professional phagocytic granulocytes of fish and are delivered to the bacteria-containing phagosome upon phagocytosis. Dev. Comp. Immunol. 2008, 32(12):1531-1538.
    • (2008) Dev. Comp. Immunol. , vol.32 , Issue.12 , pp. 1531-1538
    • Mulero, I.1    Noga, E.J.2    Meseguer, J.3    Garcia-Ayala, A.4    Mulero, V.5
  • 19
    • 34250849664 scopus 로고    scopus 로고
    • Gene expression and localization of the epinecidin-1 antimicrobial peptide in the grouper (Epinephelus coioides), and its role in protecting fish against pathogenic infection
    • Pan C.-Y., Chen J.-Y., Cheng Y.-S.E., Chen C.-Y., Ni I.H., Sheen J.-F., Pan Y.-L., Kuo C.-M. Gene expression and localization of the epinecidin-1 antimicrobial peptide in the grouper (Epinephelus coioides), and its role in protecting fish against pathogenic infection. DNA Cell. Biol. 2007, 26(6):403-413.
    • (2007) DNA Cell. Biol. , vol.26 , Issue.6 , pp. 403-413
    • Pan, C.-Y.1    Chen, J.-Y.2    Cheng, Y.-S.E.3    Chen, C.-Y.4    Ni, I.H.5    Sheen, J.-F.6    Pan, Y.-L.7    Kuo, C.-M.8
  • 20
    • 0032561422 scopus 로고    scopus 로고
    • Parasin I, an antimicrobial peptide derived from histone H2A in the catfish, Parasilurus asotus
    • Park I.Y., Park C.B., Kim M.S., Kim S.C. Parasin I, an antimicrobial peptide derived from histone H2A in the catfish, Parasilurus asotus. FEBS Lett. 1998, 437(3):258-262.
    • (1998) FEBS Lett. , vol.437 , Issue.3 , pp. 258-262
    • Park, I.Y.1    Park, C.B.2    Kim, M.S.3    Kim, S.C.4
  • 21
    • 0142134356 scopus 로고    scopus 로고
    • Gone gene fishing: how to catch novel marine antimicrobials
    • Patrzykat A., Douglas S.E. Gone gene fishing: how to catch novel marine antimicrobials. Trends Biotechnol. 2003, 21(8):362-369.
    • (2003) Trends Biotechnol. , vol.21 , Issue.8 , pp. 362-369
    • Patrzykat, A.1    Douglas, S.E.2
  • 22
    • 40849111421 scopus 로고    scopus 로고
    • Functional genomic analysis of the response of Atlantic cod (Gadus morhua) spleen to the viral mimic polyriboinosinic polyribocytidylic acid (pIC)
    • Rise M.L., Hall J., Rise M., Hori T., Gamperl A.K., Kimball J., Hubert S., Bowman S., Johnson S.C. Functional genomic analysis of the response of Atlantic cod (Gadus morhua) spleen to the viral mimic polyriboinosinic polyribocytidylic acid (pIC). Dev. Comp. Immunol. 2008, 32(8):916-931.
    • (2008) Dev. Comp. Immunol. , vol.32 , Issue.8 , pp. 916-931
    • Rise, M.L.1    Hall, J.2    Rise, M.3    Hori, T.4    Gamperl, A.K.5    Kimball, J.6    Hubert, S.7    Bowman, S.8    Johnson, S.C.9
  • 23
    • 77955432901 scopus 로고    scopus 로고
    • Impact of asymptomatic nodavirus carrier state and intraperitoneal viral mimic injection on brain transcript expression in Atlantic cod (Gadus morhua)
    • Rise M.L., Hall J.R., Rise M., Hori T.S., Browne M.J., Gamperl A.K., Hubert S., Kimball J., Bowman S., Johnson S.C. Impact of asymptomatic nodavirus carrier state and intraperitoneal viral mimic injection on brain transcript expression in Atlantic cod (Gadus morhua). Physiol. Genomics 2010, 42(2):266-280.
    • (2010) Physiol. Genomics , vol.42 , Issue.2 , pp. 266-280
    • Rise, M.L.1    Hall, J.R.2    Rise, M.3    Hori, T.S.4    Browne, M.J.5    Gamperl, A.K.6    Hubert, S.7    Kimball, J.8    Bowman, S.9    Johnson, S.C.10
  • 24
    • 0033990048 scopus 로고    scopus 로고
    • Primer3 on the WWW for general users and for biologist programmers
    • Rozen S., Skaletsky H. Primer3 on the WWW for general users and for biologist programmers. Methods Mol. Biol. 2000, 132:365-386.
    • (2000) Methods Mol. Biol. , vol.132 , pp. 365-386
    • Rozen, S.1    Skaletsky, H.2
  • 25
    • 77951124590 scopus 로고    scopus 로고
    • Antimicrobial activity in the tissues of Atlantic cod (Gadus morhua L.)
    • Ruangsri J., Fernandes J.M.O., Brinchmann M., Kiron V. Antimicrobial activity in the tissues of Atlantic cod (Gadus morhua L.). Fish Shellfish Immunol. 2010, 28(5-6):879-886.
    • (2010) Fish Shellfish Immunol. , vol.28 , Issue.5-6 , pp. 879-886
    • Ruangsri, J.1    Fernandes, J.M.O.2    Brinchmann, M.3    Kiron, V.4
  • 26
    • 33847290786 scopus 로고    scopus 로고
    • CDNA sequence and tissue expression of an antimicrobial peptide, dicentracin; a new component of the moronecidin family isolated from head kidney leukocytes of sea bass, Dicentrarchus labrax
    • Salerno G., Parrinello N., Roch P., Cammarata M. cDNA sequence and tissue expression of an antimicrobial peptide, dicentracin; a new component of the moronecidin family isolated from head kidney leukocytes of sea bass, Dicentrarchus labrax. Comp. Biochem. Physiol. B Biochem. Mol. Biol. 2007, 146(4):521-529.
    • (2007) Comp. Biochem. Physiol. B Biochem. Mol. Biol. , vol.146 , Issue.4 , pp. 521-529
    • Salerno, G.1    Parrinello, N.2    Roch, P.3    Cammarata, M.4
  • 27
    • 0035890996 scopus 로고    scopus 로고
    • Peptide antibiotics in mast cells of fish
    • Silphaduang U., Noga E.J. Peptide antibiotics in mast cells of fish. Nature 2001, 414(6861):268-269.
    • (2001) Nature , vol.414 , Issue.6861 , pp. 268-269
    • Silphaduang, U.1    Noga, E.J.2
  • 28
    • 33845326716 scopus 로고    scopus 로고
    • Evidence for widespread distribution of piscidin antimicrobial peptides in teleost fish
    • Silphaduang U., Colorni A., Noga E.J. Evidence for widespread distribution of piscidin antimicrobial peptides in teleost fish. Dis. Aquat. Organ. 2006, 72(3):241-252.
    • (2006) Dis. Aquat. Organ. , vol.72 , Issue.3 , pp. 241-252
    • Silphaduang, U.1    Colorni, A.2    Noga, E.J.3
  • 29
    • 70449523332 scopus 로고    scopus 로고
    • Myxinidin, a novel antimicrobial peptide from the epidermal mucus of hagfish, Myxine glutinosa L
    • Subramanian S., Ross N.W., MacKinnon S.L. Myxinidin, a novel antimicrobial peptide from the epidermal mucus of hagfish, Myxine glutinosa L. Mar. Biotechnol. (NY) 2009, 11(6):748-757.
    • (2009) Mar. Biotechnol. (NY) , vol.11 , Issue.6 , pp. 748-757
    • Subramanian, S.1    Ross, N.W.2    MacKinnon, S.L.3
  • 30
    • 34248380025 scopus 로고    scopus 로고
    • Gene structure of an antimicrobial peptide from mandarin fish, Siniperca chuatsi (Basilewsky), suggests that moronecidins and pleurocidins belong in one family: the piscidins
    • Sun B.J., Xie H.X., Song Y., Nie P. Gene structure of an antimicrobial peptide from mandarin fish, Siniperca chuatsi (Basilewsky), suggests that moronecidins and pleurocidins belong in one family: the piscidins. J. Fish. Dis. 2007, 30(6):335-343.
    • (2007) J. Fish. Dis. , vol.30 , Issue.6 , pp. 335-343
    • Sun, B.J.1    Xie, H.X.2    Song, Y.3    Nie, P.4
  • 31
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0
    • Tamura K., Dudley J., Nei M., Kumar S. MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol. Biol. Evol. 2007, 24(8):1596-1599.
    • (2007) Mol. Biol. Evol. , vol.24 , Issue.8 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4


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