The use of GC× GC/TOF MS with multivariate analysis for the characterization of foodborne pathogen bacteria profiles

Journal of Separation Science

Volumn 34, Issue 2, 2011, Pages 176-185

  Gardner, J Yvette ^a   Brillhart, Darcy E ^b   Benjamin, Melissa M ^b   Dixon, Lurlene G ^b   Mitchell, Latonya M ^b   Dimandja, Jean Marie D ^c,d  

^a CLAYTON STATE UNIVERSITY   (United States)

^b CENTER FOR DRUG EVALUATION AND RESEARCH   (United States)

^c SPELMAN COLLEGE   (United States)

^d GEORGIA INSTITUTE OF TECHNOLOGY   (United States)

Author keywords

Bacterial fatty acid methyl esters; Chemical index template; GC GC TOF MS; Multidimensional scaling; Principal component analysis

Indexed keywords

ANALYTES; BACTERIAL FATTY ACIDS; CELLULAR FATTY ACIDS; CHEMICAL INDEX TEMPLATE; COMPREHENSIVE TWO-DIMENSIONAL; FATTY ACID PROFILES; FLIGHT MASS SPECTROMETRY; FOOD-BORNE PATHOGENS; GRAM-NEGATIVE BACTERIA; HETEROGENEOUS MIXTURES; MULTI VARIATE ANALYSIS; MULTI-DIMENSIONAL SCALING; N-ALKANES; PRINCIPAL COMPONENTS; TEMPLATE METHODS; TWO DIMENSIONAL GAS CHROMATOGRAPHY;

AROMATIC HYDROCARBONS; BACTERIA; BACTERIOLOGY; CHEMICAL ANALYSIS; ESCHERICHIA COLI; ESTERIFICATION; ESTERS; FATTY ACIDS; GAS CHROMATOGRAPHY; MASS SPECTROMETRY; MULTIVARIANT ANALYSIS; PARAFFINS; TWO DIMENSIONAL;

PRINCIPAL COMPONENT ANALYSIS;

AROMATIC HYDROCARBON; FATTY ACID;

ARTICLE; BACILLUS CEREUS; BACILLUS THURINGIENSIS; BACTERIAL STRAIN; BACTERIUM CULTURE; CONTROLLED STUDY; ESCHERICHIA COLI; EXTRACTION; FOOD POISONING; GAS CHROMATOGRAPHY; NONHUMAN; PRIORITY JOURNAL; SALMONELLA ENTERICA; STAPHYLOCOCCUS AUREUS; TIME OF FLIGHT MASS SPECTROMETRY;

BACTERIA; FOOD CONTAMINATION; FOOD MICROBIOLOGY; GAS CHROMATOGRAPHY-MASS SPECTROMETRY; MULTIVARIATE ANALYSIS;

BACILLUS (BACTERIUM); BACTERIA (MICROORGANISMS); ESCHERICHIA COLI; NEGIBACTERIA; POSIBACTERIA; SALMONELLA; STAPHYLOCOCCUS;

EID: 78751669947     PISSN: 16159306     EISSN: 16159314     Source Type: Journal    
DOI: 10.1002/jssc.201000612     Document Type: Article

References (48)

1. Spiegelman, D., Whissell, G., Greer, C. W., Can. J. Microbiol. 2005, 51, 355-386.
2. Levin, R. E., Rapid Detection and Characterization of Foodborne Pathogens by Molecular Techniques, CRC Press, Boca Raton 2010.
3. Bai, S., Zhao, J., Zhang, Y., Huang, W., Xu, S., Chen, H., Fan, L.-M., Chen, Y., Deng, X. W., Appl. Microbiol. Biotech. 2010, 86, 983-990.
4. Prasad, D., Vidyarthi, A. S., Afr. J. Biotechnol. 2009, 9, 1768-1775.
5. Shi, X.-M., Long, F., Suo, B., Pure Appl. Chem. 2010, 82, 69-79.
6. Ikeda, M., Yamaguchi, N., Tani, K., Nasu, M., J. Health Sci. 2005, 51, 469-476.
7. Fauchet, P. M., (Ed.), Frontiers in Pathogen Detection: From Nanosensors to Systems, Proc. SPIE 2009, 7167, 1605-7422.
8. Nugen, S. R., Baeumner, A. J., Anal. Bioanal. Chem. 2008, 391, 451-454.
9. West, E. R., Cother, E. J., Steel, C. C., Ash, G. J., Can. J. Microbiol. 2010, 56, 209-216.
10. Dare, D., in:, Tang, Y.-W., Stratton, C., (Eds.), Advanced Techniques in Diagnostic Microbiology, Springer, New York 2006.
11. Demirev, P. A., Fenselau, C., Annu. Rev. Anal. Chem. 2008, 1, 71-93.
12. Whittaker, P., Mossoba, M. M., Al-Khaldi, S., Fry, F. S., Dunkel, V. C., Tall, B. D., Yurawecz, M. P., J. Microbiol. Methods 2003, 55, 709-716.
13. Ochoa, M. L., Harrington, P. B., Anal. Chem. 2005, 77, 854-863.
14. Marcobal, A., de las Rivas, B., Munoz, R., J. Verbr. Lebensm 2006, 1, 187-196.
15. Abel, K., DeSchmertzing, H., Peterson, J. I., J. Bacteriol. 1963, 85, 1039-1044.
16. Fox, A., J. Chromatogr. A 1999, 843, 287-300.
17. Roberts, L. D., McCombie, G., Titman, C. M., Griffin, J. L., J. Chromatogr. B 2008, 871, 174-181.
18. Wauthoz, P., El Lioui, M., Decallonne, J., J. Food Protection 1995, 58, 1234-1240.
19. De Boer, S. H., Sasser, M., Can. J. Microbiol. 1986, 32, 796-800.
20. Frysinger, G. S., Gaines, R. B., Environ. Forensics 2002, 3, 27-34.
21. Dimandja, J.-M. D., Anal. Chem. 2004, 76, 167A-174A.
22. Adahchour, M., Beens, J., Vreuls, R. J. J., Brinkmann, U. A. Th., Trends Anal. Chem. 2006, 25, 821-840.
23. Mondello, L., Tranchida, P. Q., Dugo, P., Dugo, G., Mass Spectrom. Rev. 2008, 27, 101-124.
24. Pierce, K. M., Hoggard, J. C., Mohler, R. E., Synovec, R. E., J. Chromatogr. A 2008, 1184, 341-352.
25. de Geus, H.-J., Aidos, I., de Boer, J., Luten, J. B., Brinkmann, U. A. Th., J. Chromatogr. A 2001, 910, 95-103.
26. Tranchida, P. Q., Costa, R., Donato, P., Sciarrone, D., Ragonese, C., Dugo, P., Dugo, G., Mondello, L., J. Sep. Sci. 2008, 31, 3347-3351.
27. Hyotylainen, T., Kallio, M., Lehtonen, M., Lintonen, S., Peraejoki, P., Jussila, M., Riekkola, M.-L., J. Sep. Sci. 2004, 27, 459-467.
28. Vlaeminck, B., Harynuk, J., Fievez, V., Marriott, P. J., Eur. J. Lipid Sci. Technol. 2007, 109, 757-766.
29. Akoto, L., Stellard, F., Irth, H., Vreuls, R. J. J., Roel, P., J. Chromatogr. A 2008, 1186, 254-261.
30. David, F., Tienpont, B., Sandra, P., J. Sep. Sci. 2008, 31, 3395.
31. Gu, Q., David, F., Lynen, F., Rumpel, K., Xu, G., De Vos, P., Sandra, P., J. Chromatogr. A 2010, 1217, 4448-4453.
32. Purcaro, G., Tranchida, P. Q., Dugo, P., La Camera, E., Bisignano, G., Conte, L., Mondello, L., J. Sep. Sci. 2010, 33, 2334-2340.
33. Kenkel, N. C., Orloci, L., Ecology 1986, 67, 919-928.
34. Brelstaff, G., Bicego, M., Culeddu, N., Chessa, M., Bioinformatics 2009, 25, 258-264.
35. Revill, A. T., Carr, M. R., Rowland, S. J., J. Chromatogr. A 1992, 589, 281-286.
36. Schutter, M. E., Dick, R. P., Soil Sci. Soc. Am. J. 2000, 64, 1659-1668.
37. Biosafety in Microbiological and Biomedical Laboratories, 5th edition. HHS Publication No. (CDC) 21-1112 (Revised December 2009).
38. Prazen, B. J., Synovec, R. E., Kowalski, B. R., Anal. Chem. 1998, 70, 218-225.
39. van Mispelaar, V. G., Tas, A. C., Smilde, A. K., Schoenmakers, P. J., van Asten, A. C., J. Chromatogr. A 2003, 1019, 15-29.
40. Reichenbach, S. E., Ni, M., Kottapalli, V., Visvanathan, A., Chemometr. Intell. Lab. Syst. 2004, 71, 107-120.
41. Pierce, K. M., Hope, J. L., Johnson, K. J., Wright, B. W., Synovec, R. E., J. Chromatogr. A 2005, 1096, 101-110.
42. Zhang, D., Huang, X., Regnier, F. E., Zhang, M., Anal. Chem. 2008, 80, 2664-2671.
43. Zellner, B. A., Bicchi, C., Dugo, P., Rubiolo, P., Dugo, G., Mondello, L., Flavour Fragr. J. 2008, 23, 297-314.
44. Kovats, E., Helv. Chim. Acta 1958, 41, 1915-1932.
45. Lee, M. L., Vassilaros, D. L., White, C. M., Novotny, M., Anal. Chem. 1979, 51, 768-773.
46. Vendeuvre, C., Ruiz-Guerrero, R., Bertoncini, F., Duval, L., Thiebaut, D., Hennion, M.-C., J. Chromatogr. A 2005, 1086, 21-28.
47. Dimandja, J.-M. D., Semard, G., Leavell, T. K., Hoy, S. J., Hud, N. V., Amorim, L. C., Cardeal, Z. L., J. Chromatogr. A. 2010 (submitted).
48. Culha, M., Kahraman, M., Cam, D., Sayin, I., Keseroglu, K., Surf. Interface Anal. 2010, 42, 462-465.