-
1
-
-
66449086493
-
Phosproteomic analysis of distinct tumor cell lines in response to nocodazole treatment
-
Nagano K., Shinkawa T., Mutoh H., Kondoh O., et al. Phosproteomic analysis of distinct tumor cell lines in response to nocodazole treatment. Proteomics 2009, 9:2861-2874.
-
(2009)
Proteomics
, vol.9
, pp. 2861-2874
-
-
Nagano, K.1
Shinkawa, T.2
Mutoh, H.3
Kondoh, O.4
-
2
-
-
52049083485
-
Phosphoproteomics: unraveling the signaling web
-
Huang P.H., White F.M. Phosphoproteomics: unraveling the signaling web. Mol Cell 2008, 31:777-781.
-
(2008)
Mol Cell
, vol.31
, pp. 777-781
-
-
Huang, P.H.1
White, F.M.2
-
4
-
-
0033565503
-
Immobilized gallium(III) affinity chromatography of phosphopeptides
-
Posewitz M.C., Tempst P. Immobilized gallium(III) affinity chromatography of phosphopeptides. Anal Chem 1999, 71:2883-2892.
-
(1999)
Anal Chem
, vol.71
, pp. 2883-2892
-
-
Posewitz, M.C.1
Tempst, P.2
-
5
-
-
3242688830
-
Selective isolation at the femtomole level of phosphopeptides from proteolytic digests using 2D-NanoLC-ESI-MS/MS and titanium oxide precolumns
-
Pinkse M.W., Uitto P.M., Hilhorst M.J., Ooms B., Heck A.J. Selective isolation at the femtomole level of phosphopeptides from proteolytic digests using 2D-NanoLC-ESI-MS/MS and titanium oxide precolumns. Anal Chem 2006, 76:3935-3943.
-
(2006)
Anal Chem
, vol.76
, pp. 3935-3943
-
-
Pinkse, M.W.1
Uitto, P.M.2
Hilhorst, M.J.3
Ooms, B.4
Heck, A.J.5
-
6
-
-
24944519450
-
Highly selective enrichment of phosphorylated peptides from peptide mixtures using titanium dioxide microcolumns
-
Larsen M.R., Thingholm T.E., Jensen O.N., Roepstorff P., Jorgensen T.J. Highly selective enrichment of phosphorylated peptides from peptide mixtures using titanium dioxide microcolumns. Mol Cell Proteomics 2005, 4:873-886.
-
(2005)
Mol Cell Proteomics
, vol.4
, pp. 873-886
-
-
Larsen, M.R.1
Thingholm, T.E.2
Jensen, O.N.3
Roepstorff, P.4
Jorgensen, T.J.5
-
7
-
-
23944453389
-
Global phosphoproteome of HT-29 human colon adenocarcinoma cells
-
Kim J.E., Tannenbaum S.R., White F.M. Global phosphoproteome of HT-29 human colon adenocarcinoma cells. J Proteome Res 2005, 4:1339-1346.
-
(2005)
J Proteome Res
, vol.4
, pp. 1339-1346
-
-
Kim, J.E.1
Tannenbaum, S.R.2
White, F.M.3
-
8
-
-
33646541052
-
Phosphoproteome profiling of human skin fibroblast cells in response to low and high-dose irradiation
-
Yang F., Stenoien D.L., Strittmatter E.F., Wang J., et al. Phosphoproteome profiling of human skin fibroblast cells in response to low and high-dose irradiation. J Proteome Res 2006, 5:1252-1260.
-
(2006)
J Proteome Res
, vol.5
, pp. 1252-1260
-
-
Yang, F.1
Stenoien, D.L.2
Strittmatter, E.F.3
Wang, J.4
-
9
-
-
8844272471
-
Phosphoproteomic analysis of the developing mouse brain
-
Ballif B.A., Villen J., Beausoleil S.A., Schwartz D., Gygi S.P. Phosphoproteomic analysis of the developing mouse brain. Mol Cell Proteomics 2004, 3:1093-1101.
-
(2004)
Mol Cell Proteomics
, vol.3
, pp. 1093-1101
-
-
Ballif, B.A.1
Villen, J.2
Beausoleil, S.A.3
Schwartz, D.4
Gygi, S.P.5
-
10
-
-
4344574540
-
Large-scale characterization of HeLa cell nuclear phosphoproteins
-
Beausoleil S.A., Jedrychowski M., Schwartz D., Elias J.E., et al. Large-scale characterization of HeLa cell nuclear phosphoproteins. Proc Natl Acad Sci USA 2004, 101:12130-12135.
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, pp. 12130-12135
-
-
Beausoleil, S.A.1
Jedrychowski, M.2
Schwartz, D.3
Elias, J.E.4
-
11
-
-
11444263845
-
Large-scale analysis of in vivo phosphorylated membrane proteins by immobilized metal ion affinity chromatography and mass spectrometry
-
Nuhse T.S., Stensballe A., Jensen O.N., Peck S.C. Large-scale analysis of in vivo phosphorylated membrane proteins by immobilized metal ion affinity chromatography and mass spectrometry. Mol Cell Proteomics 2003, 2:1234-1243.
-
(2003)
Mol Cell Proteomics
, vol.2
, pp. 1234-1243
-
-
Nuhse, T.S.1
Stensballe, A.2
Jensen, O.N.3
Peck, S.C.4
-
12
-
-
33750456519
-
Global, in vivo, and site-specific phosphorylation dynamics in signaling networks
-
Olsen J.V., Blagoev B., Gnad F., Macek B., et al. Global, in vivo, and site-specific phosphorylation dynamics in signaling networks. Cell 2006, 127:635-648.
-
(2006)
Cell
, vol.127
, pp. 635-648
-
-
Olsen, J.V.1
Blagoev, B.2
Gnad, F.3
Macek, B.4
-
13
-
-
21144458164
-
Immunoaffinity profiling of tyrosine phosphorylation in cancer cells
-
Rush J., Moritz A., Lee K.A., Guo A., et al. Immunoaffinity profiling of tyrosine phosphorylation in cancer cells. Nat Biotechnol 2005, 23:94-101.
-
(2005)
Nat Biotechnol
, vol.23
, pp. 94-101
-
-
Rush, J.1
Moritz, A.2
Lee, K.A.3
Guo, A.4
-
14
-
-
36849065315
-
Global survey of phosphotyrosine signaling identifies oncogenic kinases in lung cancer
-
Rikova K., Guo A., Zeng Q., Possemato A., et al. Global survey of phosphotyrosine signaling identifies oncogenic kinases in lung cancer. Cell 2007, 131:1190-1203.
-
(2007)
Cell
, vol.131
, pp. 1190-1203
-
-
Rikova, K.1
Guo, A.2
Zeng, Q.3
Possemato, A.4
-
15
-
-
33846785485
-
Large-scale phosphorylation analysis of mouse liver
-
Villén J., Beausoleil S.A., Gerber S.A., Gygi S.P. Large-scale phosphorylation analysis of mouse liver. Proc Natl Acad Sci USA 2007, 104:1488-1493.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 1488-1493
-
-
Villén, J.1
Beausoleil, S.A.2
Gerber, S.A.3
Gygi, S.P.4
-
16
-
-
65249137629
-
Global and site-specific quantitative phosphoproteomics: principles and applications
-
Macek B., Mann M., Olsen J.V. Global and site-specific quantitative phosphoproteomics: principles and applications. Annu Rev Pharmacol Toxicol 2009, 49:199-221.
-
(2009)
Annu Rev Pharmacol Toxicol
, vol.49
, pp. 199-221
-
-
Macek, B.1
Mann, M.2
Olsen, J.V.3
-
17
-
-
48349138726
-
Kinase-selective enrichment enables quantitative phosphoproteomics of the kinome across the cell cycle
-
Daub H., Olsen J.V., Bairlein M., Gnad F., et al. Kinase-selective enrichment enables quantitative phosphoproteomics of the kinome across the cell cycle. Mol Cell 2008, 31:438-448.
-
(2008)
Mol Cell
, vol.31
, pp. 438-448
-
-
Daub, H.1
Olsen, J.V.2
Bairlein, M.3
Gnad, F.4
-
18
-
-
70549086229
-
Large-scale proteomics analysis of the human kinome
-
Oppermann F.S., Gnad F., Olsen J.V., Hornberger R., et al. Large-scale proteomics analysis of the human kinome. Mol Cell Proteomics 2009, 8:1751-1764.
-
(2009)
Mol Cell Proteomics
, vol.8
, pp. 1751-1764
-
-
Oppermann, F.S.1
Gnad, F.2
Olsen, J.V.3
Hornberger, R.4
-
19
-
-
70349961430
-
Sensitive multiplexed analysis of kinase activities and activity-based kinase identification
-
Kubota K., Anjum R., Yu Y., Kunz R.C., et al. Sensitive multiplexed analysis of kinase activities and activity-based kinase identification. Nat Biotechnol 2009, 27:933-940.
-
(2009)
Nat Biotechnol
, vol.27
, pp. 933-940
-
-
Kubota, K.1
Anjum, R.2
Yu, Y.3
Kunz, R.C.4
-
20
-
-
67650886056
-
A site-specific, multiplexed kinase activity assay using stable-isotope dilution and high-resolution mass spectrometry
-
Yu Y., Anjum R., Kubota K., Rush J., et al. A site-specific, multiplexed kinase activity assay using stable-isotope dilution and high-resolution mass spectrometry. Proc Natl Acad Sci USA 2009, 106:11606-11611.
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 11606-11611
-
-
Yu, Y.1
Anjum, R.2
Kubota, K.3
Rush, J.4
-
21
-
-
77951644400
-
Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis
-
Olsen J.V., Vermeulen M., Santamaria A., Kumar C., et al. Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis. Sci Signal 2010, 3:ra3.
-
(2010)
Sci Signal
, vol.3
-
-
Olsen, J.V.1
Vermeulen, M.2
Santamaria, A.3
Kumar, C.4
-
22
-
-
57649187385
-
Peptide separation with immobilized pI strips is an attractive alternative to in-gel protein digestion for proteome analysis
-
Hubner N.C., Ren S., Mann M. Peptide separation with immobilized pI strips is an attractive alternative to in-gel protein digestion for proteome analysis. Proteomics 2008, 8:4862-4872.
-
(2008)
Proteomics
, vol.8
, pp. 4862-4872
-
-
Hubner, N.C.1
Ren, S.2
Mann, M.3
-
23
-
-
26944474804
-
STEM: a software tool for large-scale proteomic data analyses
-
Shinkawa T., Taoka M., Yamauchi Y., Ichimura T., et al. STEM: a software tool for large-scale proteomic data analyses. J Proteome Res 2005, 4:1826-1831.
-
(2005)
J Proteome Res
, vol.4
, pp. 1826-1831
-
-
Shinkawa, T.1
Taoka, M.2
Yamauchi, Y.3
Ichimura, T.4
-
24
-
-
20144386804
-
Large-scale identification of proteins expressed in mouse embryonic stem cells
-
Nagano K., Taoka M., Yamauchi Y., Itagaki C., et al. Large-scale identification of proteins expressed in mouse embryonic stem cells. Proteomics 2005, 5:1346-1361.
-
(2005)
Proteomics
, vol.5
, pp. 1346-1361
-
-
Nagano, K.1
Taoka, M.2
Yamauchi, Y.3
Itagaki, C.4
-
25
-
-
29244447154
-
Cell surface labeling and mass spectrometry reveal diversity of cell surface markers and signaling molecules expressed in undifferentiated mouse embryonic stem cells
-
Nunomura K., Nagano K., Itagaki C., Taoka M., et al. Cell surface labeling and mass spectrometry reveal diversity of cell surface markers and signaling molecules expressed in undifferentiated mouse embryonic stem cells. Mol Cell Proteomics 2005, 4:1968-1976.
-
(2005)
Mol Cell Proteomics
, vol.4
, pp. 1968-1976
-
-
Nunomura, K.1
Nagano, K.2
Itagaki, C.3
Taoka, M.4
-
26
-
-
36549047947
-
A new strategy to filter out false positive identifications of peptides in SEQUEST database search results
-
Zhang J., Li J., Xie H., Zhu Y., He F. A new strategy to filter out false positive identifications of peptides in SEQUEST database search results. Proteomics 2007, 7:4036-4044.
-
(2007)
Proteomics
, vol.7
, pp. 4036-4044
-
-
Zhang, J.1
Li, J.2
Xie, H.3
Zhu, Y.4
He, F.5
-
27
-
-
24044513966
-
Comparative evaluation of mass spectrometry platforms used in large-scale proteomics investigations
-
Elias J.E., Haas W., Faherty B.K., Gygi S.P. Comparative evaluation of mass spectrometry platforms used in large-scale proteomics investigations. Nat Methods 2005, 2:667-675.
-
(2005)
Nat Methods
, vol.2
, pp. 667-675
-
-
Elias, J.E.1
Haas, W.2
Faherty, B.K.3
Gygi, S.P.4
|