-
1
-
-
0025183708
-
Basiclocal alignment search tool
-
Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ. 1990. Basiclocal alignment search tool. J Mol Biol 215:403-10.
-
(1990)
J Mol Biol
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
2
-
-
0041153826
-
Polyphasic study of the spatial distribution of microorganisms in Mexican pozol, a fermented maize dough, demonstrates the need for cultivation independent methods to investigate traditional fermentations
-
Ampe F, Omar NB, Moizan C, Wacher C, Guyot J-P. 1999. Polyphasic study of the spatial distribution of microorganisms in Mexican pozol, a fermented maize dough, demonstrates the need for cultivation independent methods to investigate traditional fermentations. Appl Environ Microbiol 65:5464-73.
-
(1999)
Appl Environ Microbiol
, vol.65
, pp. 5464-5473
-
-
Ampe, F.1
Omar, N.B.2
Moizan, C.3
Wacher, C.4
Guyot, J.5
-
3
-
-
0034666483
-
Cluster analysis, richness and biodiversity indexes derived from denaturing gradient gel electrophoresis fingerprints of bacterial communities demonstrate that traditional maize fermentations are driven by the transformation process
-
Ampe F, Miambi E. 2000. Cluster analysis, richness and biodiversity indexes derived from denaturing gradient gel electrophoresis fingerprints of bacterial communities demonstrate that traditional maize fermentations are driven by the transformation process. Int J Food Microbiol 60:91-7.
-
(2000)
Int J Food Microbiol
, vol.60
, pp. 91-97
-
-
Ampe, F.1
Miambi, E.2
-
4
-
-
78651446299
-
-
Applied Biosystem website.
-
Applied Biosystem website.
-
-
-
-
6
-
-
0000786368
-
Carbon dioxide as a controller of the spoilage flora of pork, with special reference to temperature and sodium chloride
-
Blickstad E, Molin G. 1983. Carbon dioxide as a controller of the spoilage flora of pork, with special reference to temperature and sodium chloride. J Food Prot 46:756-63.
-
(1983)
J Food Prot
, vol.46
, pp. 756-763
-
-
Blickstad, E.1
Molin, G.2
-
7
-
-
0036019630
-
Comparison of shelf life of vacuum-packed pork and beef
-
Blixt Y, Borch E. 2002. Comparison of shelf life of vacuum-packed pork and beef. Meat Sci 60:371-8.
-
(2002)
Meat Sci
, vol.60
, pp. 371-378
-
-
Blixt, Y.1
Borch, E.2
-
9
-
-
0035644966
-
A novel polymerase chain reaction (PCR)-denaturing gradient gel electrophoresis (DGGE) for the identification of Micrococcaceae strains involved in meat fermentations. Its application to naturally fermented Italian sausages
-
Cocolin L, Manzano M, Aggio D, Cantoni C, Comi G. 2001a. A novel polymerase chain reaction (PCR)-denaturing gradient gel electrophoresis (DGGE) for the identification of Micrococcaceae strains involved in meat fermentations. Its application to naturally fermented Italian sausages. Meat Sci 58:59-64.
-
(2001)
Meat Sci
, vol.58
, pp. 59-64
-
-
Cocolin, L.1
Manzano, M.2
Aggio, D.3
Cantoni, C.4
Comi, G.5
-
10
-
-
0035511958
-
Denaturing gradient gel electrophoresis analysis of the 16S rRNA gene V1 region to monitor dynamic changes in the bacterial population during fermentation of Italian sausages
-
Cocolin L, Manzano M, Cantoni C, Comi G. 2001b. Denaturing gradient gel electrophoresis analysis of the 16S rRNA gene V1 region to monitor dynamic changes in the bacterial population during fermentation of Italian sausages. Appl Environ Microbiol 67:5113-21.
-
(2001)
Appl Environ Microbiol
, vol.67
, pp. 5113-5121
-
-
Cocolin, L.1
Manzano, M.2
Cantoni, C.3
Comi, G.4
-
11
-
-
0026491743
-
The relationship between the phenotypic properties of bacteria from chilled-stored meat and spoilage processes
-
Dainty RH, Mackey BM. 1992. The relationship between the phenotypic properties of bacteria from chilled-stored meat and spoilage processes. J Appl Bacteriol 73:S103-14.
-
(1992)
J Appl Bacteriol
, vol.73
-
-
Dainty, R.H.1
Mackey, B.M.2
-
12
-
-
0021005265
-
Food microbiology: advances and prospects
-
In: Roberts TA, Skinner FA, editors. London, Academic Press.
-
Dainty RH, Shaw BG, Roberts TA. 1983. Microbial and chemical changes in chill-stored red meats. In: Roberts TA, Skinner FA, editors. Food microbiology: advances and prospects. London Academic Press. p 151-78.
-
(1983)
Microbial and chemical changes in chill-stored red meats
, pp. 151-178
-
-
Dainty, R.H.1
Shaw, B.G.2
Roberts, T.A.3
-
13
-
-
61449145431
-
A filtration-based real-time PCR method for the quantitative detection of viable Salmonella enterica and Listeria monocytogenes in food samples
-
D'Urso OF, Poltronieri P, Marsigliante S, Storelli C, Hernádez M, David Rodríguez-Láaro D. 2009. A filtration-based real-time PCR method for the quantitative detection of viable Salmonella enterica and Listeria monocytogenes in food samples. Food Microbiol 26:311-6.
-
(2009)
Food Microbiol
, vol.26
, pp. 311-316
-
-
D'Urso, O.F.1
Poltronieri, P.2
Marsigliante, S.3
Storelli, C.4
Hernádez, M.5
David Rodríguez-Láaro, D.6
-
14
-
-
0018724416
-
Effect of packaging under carbon dioxide, nitrogen or air on the microbial flora of pork stored at 4 °C
-
Enfors S-O, Moling G, Ternström A. 1979. Effect of packaging under carbon dioxide, nitrogen or air on the microbial flora of pork stored at 4 °C. J Appl Bacteriol 47:197-208.
-
(1979)
J Appl Bacteriol
, vol.47
, pp. 197-208
-
-
Enfors, S.1
Moling, G.2
Ternström, A.3
-
15
-
-
1142297453
-
PCR-DGGE fingerprinting: novel strategies for detection of microbes in food
-
Ercolini D. 2004. PCR-DGGE fingerprinting: novel strategies for detection of microbes in food. J Microbiol Methods 56:297-314.
-
(2004)
J Microbiol Methods
, vol.56
, pp. 297-314
-
-
Ercolini, D.1
-
16
-
-
33746101830
-
Changes in the spoilage-related microbiota of beef during refrigerated storage under different packaging conditions
-
Ercolini D, Russo F, Torrieri E, Masi P, Villani F. 2006. Changes in the spoilage-related microbiota of beef during refrigerated storage under different packaging conditions. Appl Environ Microbiol 72:4663-71.
-
(2006)
Appl Environ Microbiol
, vol.72
, pp. 4663-4671
-
-
Ercolini, D.1
Russo, F.2
Torrieri, E.3
Masi, P.4
Villani, F.5
-
17
-
-
33747369866
-
Direct molecular approach to monitoring bacterial colonization on vacuum-packaged beef
-
Fontana C, Cocconcelli PS, Vignolo G. 2006. Direct molecular approach to monitoring bacterial colonization on vacuum-packaged beef. Appl Environ Microbiol 72:5618-22.
-
(2006)
Appl Environ Microbiol
, vol.72
, pp. 5618-5622
-
-
Fontana, C.1
Cocconcelli, P.S.2
Vignolo, G.3
-
18
-
-
3142698304
-
Improved resolution of the phylogenetic relationships among Pseudomonas by the combined analysis of atpD, carA, recA and 16S rDNA
-
Hilario E, Buckley TR, Young JM. 2004. Improved resolution of the phylogenetic relationships among Pseudomonas by the combined analysis of atpD, carA, recA and 16S rDNA. Antonie Leeuwenhoek 86:51-64.
-
(2004)
Antonie Leeuwenhoek
, vol.86
, pp. 51-64
-
-
Hilario, E.1
Buckley, T.R.2
Young, J.M.3
-
19
-
-
0002061168
-
Food microbiology: fundamentals and frontiers
-
In: Doyle MP, Beuchat TJ, editors. Washington, ASM Press.
-
Jackson TC, Acuff GR, Dickson JS. 1997. Meat, poultry, and seafood. In: Doyle MP, Beuchat TJ, editors. Food microbiology: fundamentals and frontiers. Washington ASM Press. p 83-100.
-
(1997)
Meat, poultry, and seafood
, pp. 83-100
-
-
Jackson, T.C.1
Acuff, G.R.2
Dickson, J.S.3
-
20
-
-
0004223311
-
Modern food microbiology
-
In: Heldman DR, editor. Gaithersburg, Aspen Publishers, Inc.
-
Jay JM. 2000. Food preservation with modified atmospheres. In: Heldman DR, editor. Modern food microbiology. Gaithersburg Aspen Publishers, Inc. p 59-295.
-
(2000)
Food preservation with modified atmospheres
, pp. 59-295
-
-
Jay, J.M.1
-
21
-
-
49649096885
-
Control of spoilage microorganisms in minced pork by a self-developed modified atmosphere induced by the respiratory activity of meat microflora
-
Koutsoumanis KP, Stamatiou AP, Drosinos EH, Nychas G-JE. 2008. Control of spoilage microorganisms in minced pork by a self-developed modified atmosphere induced by the respiratory activity of meat microflora. Food Microbiol 25:915-21.
-
(2008)
Food Microbiol
, vol.25
, pp. 915-921
-
-
Koutsoumanis, K.P.1
Stamatiou, A.P.2
Drosinos, E.H.3
Nychas, G.4
-
22
-
-
0033434358
-
Consequences of packaging on bacterial growth. Meat is an ecological niche
-
Labadie J. 1999. Consequences of packaging on bacterial growth. Meat is an ecological niche. Meat Sci 52:299-305.
-
(1999)
Meat Sci
, vol.52
, pp. 299-305
-
-
Labadie, J.1
-
23
-
-
0001857117
-
Nucleic acid techniques in bacterial systematics
-
In: Stackebrandt ER, Goodfellow M, editors. Chichester, John Wiley & Sons Ltd.
-
Lane DJ. 1991. 16S/23S rRNA sequencing. In: Stackebrandt ER, Goodfellow M, editors. Nucleic acid techniques in bacterial systematics. Chichester John Wiley & Sons Ltd. p 115-75.
-
(1991)
16S/23S rRNA sequencing
, pp. 115-175
-
-
Lane, D.J.1
-
24
-
-
0035710746
-
Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C (T)) method
-
Livak KJ, Schmittgen TD. 2001. Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C (T)) method. Methods 25:402-8.
-
(2001)
Methods
, vol.25
, pp. 402-408
-
-
Livak, K.J.1
Schmittgen, T.D.2
-
25
-
-
31344457709
-
Bacterial community diversity associated with four marine sponges from the South China Sea based on 16SrDNA-DGGE fingerprinting
-
Li ZY, He LM, Wu J, Jiang Q. 2006. Bacterial community diversity associated with four marine sponges from the South China Sea based on 16SrDNA-DGGE fingerprinting. J Exp Mar Biol Ecol 329:75-85.
-
(2006)
J Exp Mar Biol Ecol
, vol.329
, pp. 75-85
-
-
Li, Z.Y.1
He, L.M.2
Wu, J.3
Jiang, Q.4
-
26
-
-
1842558748
-
Real-time nucleic acid-based detection methods for pathogenic bacteria in food
-
McKillip JL, Drake M. 2004. Real-time nucleic acid-based detection methods for pathogenic bacteria in food. J Food Prot 67:823-32.
-
(2004)
J Food Prot
, vol.67
, pp. 823-832
-
-
McKillip, J.L.1
Drake, M.2
-
27
-
-
0020329713
-
Numerical taxonomy of psychrotrophic pseudomonads
-
Molin G, Ternström A. 1982. Numerical taxonomy of psychrotrophic pseudomonads. J Gen Microbiol 128:1249-64.
-
(1982)
J Gen Microbiol
, vol.128
, pp. 1249-1264
-
-
Molin, G.1
Ternström, A.2
-
28
-
-
0022616989
-
Phenotypically based taxonomy of psychrotrophic Pseudomonas isolated from spoiled meat, water, and soil
-
Molin G, Ternström A. 1986. Phenotypically based taxonomy of psychrotrophic Pseudomonas isolated from spoiled meat, water, and soil. Int J Syst Bacteriol 36:257-74.
-
(1986)
Int J Syst Bacteriol
, vol.36
, pp. 257-274
-
-
Molin, G.1
Ternström, A.2
-
29
-
-
0027460328
-
Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA
-
Muyzer G, De Wall EC, Uitterlinden AG. 1993. Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA. Appl Environ Microbiol 59:695-700.
-
(1993)
Appl Environ Microbiol
, vol.59
, pp. 695-700
-
-
Muyzer, G.1
De Wall, E.C.2
Uitterlinden, A.G.3
-
30
-
-
0022422655
-
Nearly all single base substitutions in DNA fragments joined to a GC-clamp can be detected by denaturing gradient gel electrophoresis
-
Myers RM, Fischer SG, Lerman LS, Maniatis T. 1985. Nearly all single base substitutions in DNA fragments joined to a GC-clamp can be detected by denaturing gradient gel electrophoresis. Nucleic Acids Res 13:3131-45.
-
(1985)
Nucleic Acids Res
, vol.13
, pp. 3131-3145
-
-
Myers, R.M.1
Fischer, S.G.2
Lerman, L.S.3
Maniatis, T.4
-
31
-
-
0004140133
-
Encyclopedia of food microbiology
-
In: Robinson R, Batt C, Patel P, editors. London, Academic Press.
-
Nychas G-JE, Drosinos E. 2000. Meat and poultry spoilage. In: Robinson R, Batt C, Patel P, editors. Encyclopedia of food microbiology. London Academic Press. p 1253-9.
-
(2000)
Meat and poultry spoilage
, pp. 1253-1259
-
-
Nychas, G.1
Drosinos, E.2
-
33
-
-
0029796310
-
Sequence heterogeneities of genes encoding 16S rRNAs in Paenibacillus polymyxa detected by temperature gradient gel electrophoresis
-
Nübel U, Engelen B, Felske A, Snaidr J, Wieshuber A, Amann RI, Ludwig W, Backhaus H. 1996. Sequence heterogeneities of genes encoding 16S rRNAs in Paenibacillus polymyxa detected by temperature gradient gel electrophoresis. J Bacteriol 178:5636-43.
-
(1996)
J Bacteriol
, vol.178
, pp. 5636-5643
-
-
Nübel, U.1
Engelen, B.2
Felske, A.3
Snaidr, J.4
Wieshuber, A.5
Amann, R.I.6
Ludwig, W.7
Backhaus, H.8
-
34
-
-
68749083512
-
Development of a Real-time PCR assay for the specific detection of Brochothrix thermosphacta in fresh and spoiled raw meat
-
Pennacchia C, Ercolini D, Villani F. 2009. Development of a Real-time PCR assay for the specific detection of Brochothrix thermosphacta in fresh and spoiled raw meat. Int J Food Microbiol 134:230-6.
-
(2009)
Int J Food Microbiol
, vol.134
, pp. 230-236
-
-
Pennacchia, C.1
Ercolini, D.2
Villani, F.3
-
35
-
-
17344392308
-
A new mathematical model for relative quantification in real-time RT-PCR
-
Pfaffl MW. 2001. A new mathematical model for relative quantification in real-time RT-PCR. Nucleic Acids Res 29:2002-7.
-
(2001)
Nucleic Acids Res
, vol.29
, pp. 2002-2007
-
-
Pfaffl, M.W.1
-
36
-
-
0031711754
-
Bias in template-to-product ratios in multitemplate PCR
-
Polz MF, Cavanaugh CM. 1998. Bias in template-to-product ratios in multitemplate PCR. Appl Environ Microbiol 64:3724-30.
-
(1998)
Appl Environ Microbiol
, vol.64
, pp. 3724-3730
-
-
Polz, M.F.1
Cavanaugh, C.M.2
-
37
-
-
37349033608
-
Detection, quantification and vitality of Listeria monocytogenes in food as determined by quantitative PCR
-
Rantsiou K, Alessandria V, Urso R, Dolci P, Cocolin L. 2008. Detection, quantification and vitality of Listeria monocytogenes in food as determined by quantitative PCR. Int J Food Microbiol 121:99-105.
-
(2008)
Int J Food Microbiol
, vol.121
, pp. 99-105
-
-
Rantsiou, K.1
Alessandria, V.2
Urso, R.3
Dolci, P.4
Cocolin, L.5
-
38
-
-
34250369243
-
Quantitative detection of Campylobacter jejuni on fresh chicken carcasses by real-time PCR
-
Ronner AC, Lindmark H. 2007. Quantitative detection of Campylobacter jejuni on fresh chicken carcasses by real-time PCR. J Food Prot 70:1373-8.
-
(2007)
J Food Prot
, vol.70
, pp. 1373-1378
-
-
Ronner, A.C.1
Lindmark, H.2
-
39
-
-
33745748880
-
Behaviour of Brochothrix thermosphacta in presence of other meat spoilage microbial groups
-
Russo F, Ercolini D, Mauriello G, Villani F. 2006. Behaviour of Brochothrix thermosphacta in presence of other meat spoilage microbial groups. Food Microbiol 23:797-802.
-
(2006)
Food Microbiol
, vol.23
, pp. 797-802
-
-
Russo, F.1
Ercolini, D.2
Mauriello, G.3
Villani, F.4
-
40
-
-
0020324179
-
A numerical taxonomic study of the Pseudomonas strains from spoiled meat
-
Shaw BG, Latty JB. 1982. A numerical taxonomic study of the Pseudomonas strains from spoiled meat. J Appl Bacteriol 52:219-28.
-
(1982)
J Appl Bacteriol
, vol.52
, pp. 219-228
-
-
Shaw, B.G.1
Latty, J.B.2
-
41
-
-
0021192682
-
A study of relative incidence of different Pseudomonas groups on meat using a computer-assisted identification technique employing only carbon source tests
-
Shaw BG, Latty JB. 1984. A study of relative incidence of different Pseudomonas groups on meat using a computer-assisted identification technique employing only carbon source tests. J Appl Bacteriol 57:59-67.
-
(1984)
J Appl Bacteriol
, vol.57
, pp. 59-67
-
-
Shaw, B.G.1
Latty, J.B.2
-
42
-
-
0033760479
-
Quantitative analysis of small-subunit rRNA genes in mixed microbial populations via 5'-nuclease assays
-
Suzuki MT, Beja O, Taylor LT, Delong EF. 2000. Quantitative analysis of small-subunit rRNA genes in mixed microbial populations via 5'-nuclease assays. Appl Environ Microbiol 66:4605-14.
-
(2000)
Appl Environ Microbiol
, vol.66
, pp. 4605-4614
-
-
Suzuki, M.T.1
Beja, O.2
Taylor, L.T.3
Delong, E.F.4
-
43
-
-
0242573495
-
Development and validation of a nested-PCR-denaturing gradient gel electrophoresis method for taxonomic characterization of bifidobacterial communities
-
Temmerman R, Masco L, Vanhoutte T, Huys G, Swings J. 2003. Development and validation of a nested-PCR-denaturing gradient gel electrophoresis method for taxonomic characterization of bifidobacterial communities. Appl Environ Microbiol 69:6380-5.
-
(2003)
Appl Environ Microbiol
, vol.69
, pp. 6380-6385
-
-
Temmerman, R.1
Masco, L.2
Vanhoutte, T.3
Huys, G.4
Swings, J.5
-
44
-
-
0002032381
-
Computer-aided objective comparison of electrophoretic patterns for grouping and identification of microorganisms
-
Vauterin L, Vauterin P. 1992. Computer-aided objective comparison of electrophoretic patterns for grouping and identification of microorganisms. Eur Microbiol 1:37-41.
-
(1992)
Eur Microbiol
, vol.1
, pp. 37-41
-
-
Vauterin, L.1
Vauterin, P.2
-
45
-
-
0031813913
-
A highly selective PCR protocol for detecting 16S rRNA genes of the genus Pseudomonas (Sensu Stricto) in environmental samples
-
Widmer F, Seidler RJ, Gillevet PM, Watrud LS, Di Giovanni GD. 1998. A highly selective PCR protocol for detecting 16S rRNA genes of the genus Pseudomonas (Sensu Stricto) in environmental samples. Appl Environ Microbiol 64:2545-53.
-
(1998)
Appl Environ Microbiol
, vol.64
, pp. 2545-2553
-
-
Widmer, F.1
Seidler, R.J.2
Gillevet, P.M.3
Watrud, L.S.4
Di Giovanni, G.D.5
-
46
-
-
0025045135
-
Amplification of bacterial 16S ribosomal DNA with polymerase chain reaction
-
Wilson KH, Blitchington RB, Greene RC. 1990. Amplification of bacterial 16S ribosomal DNA with polymerase chain reaction. J Clin Microbiol 28:1942-6.
-
(1990)
J Clin Microbiol
, vol.28
, pp. 1942-1946
-
-
Wilson, K.H.1
Blitchington, R.B.2
Greene, R.C.3
-
47
-
-
0033764790
-
Phylogeny of the genus Pseudomonas: intrageneric structure reconstructed from the nucleotide sequences of gyrB and rpoD genes
-
Yamamoto S, Kasai H, Arnold DL, Jackson RW, Viavian A, Harayama S. 2000. Phylogeny of the genus Pseudomonas: intrageneric structure reconstructed from the nucleotide sequences of gyrB and rpoD genes. Microbiol 146:2385-94.
-
(2000)
Microbiol
, vol.146
, pp. 2385-2394
-
-
Yamamoto, S.1
Kasai, H.2
Arnold, D.L.3
Jackson, R.W.4
Viavian, A.5
Harayama, S.6
|