메뉴 건너뛰기




Volumn 12, Issue , 2011, Pages

Revision history aware repositories of computational models of biological systems

Author keywords

[No Author keywords available]

Indexed keywords

AUTOMATED PROCESS; BIOLOGICAL SYSTEMS MODELLING; COMPUTATIONAL MODEL; DISTRIBUTED VERSION CONTROL SYSTEMS; HISTORY INFORMATIONS; MODEL COMPOSITION; MODEL REPOSITORIES; VERSION CONTROL SYSTEM;

EID: 78651371376     PISSN: None     EISSN: 14712105     Source Type: Journal    
DOI: 10.1186/1471-2105-12-22     Document Type: Article
Times cited : (13)

References (26)
  • 2
    • 0037342537 scopus 로고    scopus 로고
    • The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models
    • 10.1093/bioinformatics/btg015, 12611808
    • Hucka M, Finney A, Sauro H, Bolouri H, Doyle J, Kitano H, et al. The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models. Bioinformatics 2003, 19(4):524. 10.1093/bioinformatics/btg015, 12611808.
    • (2003) Bioinformatics , vol.19 , Issue.4 , pp. 524
    • Hucka, M.1    Finney, A.2    Sauro, H.3    Bolouri, H.4    Doyle, J.5    Kitano, H.6
  • 4
    • 40749162829 scopus 로고    scopus 로고
    • LibSBML: an API Library for SBML
    • 10.1093/bioinformatics/btn051, 2517632, 18252737
    • Bornstein B, Keating S, Jouraku A, Hucka M. LibSBML: an API Library for SBML. Bioinformatics 2008, 24(6):880. 10.1093/bioinformatics/btn051, 2517632, 18252737.
    • (2008) Bioinformatics , vol.24 , Issue.6 , pp. 880
    • Bornstein, B.1    Keating, S.2    Jouraku, A.3    Hucka, M.4
  • 6
    • 33947623106 scopus 로고    scopus 로고
    • SBMLeditor: effective creation of models in the Systems Biology Markup Language(SBML)
    • 10.1186/1471-2105-8-79, 1831489, 17341299
    • Rodriguez N, Donizelli M, Le Novère N. SBMLeditor: effective creation of models in the Systems Biology Markup Language(SBML). BMC bioinformatics 2007, 8:79. 10.1186/1471-2105-8-79, 1831489, 17341299.
    • (2007) BMC bioinformatics , vol.8 , pp. 79
    • Rodriguez, N.1    Donizelli, M.2    Le Novère, N.3
  • 9
    • 33845387962 scopus 로고    scopus 로고
    • JSIM: Free software package for teaching physiological modeling and research
    • Raymond G, Butterworth E, Bassingthwaighte J. JSIM: Free software package for teaching physiological modeling and research. Experimental Biology 2003, 280:102-107.
    • (2003) Experimental Biology , vol.280 , pp. 102-107
    • Raymond, G.1    Butterworth, E.2    Bassingthwaighte, J.3
  • 11
    • 51749096446 scopus 로고    scopus 로고
    • The CellML model repository
    • 10.1093/bioinformatics/btn390, 18658182
    • Lloyd C, Lawson J, Hunter P, Nielsen P. The CellML model repository. Bioinformatics 2008, 24(18):2122. 10.1093/bioinformatics/btn390, 18658182.
    • (2008) Bioinformatics , vol.24 , Issue.18 , pp. 2122
    • Lloyd, C.1    Lawson, J.2    Hunter, P.3    Nielsen, P.4
  • 12
    • 33644877164 scopus 로고    scopus 로고
    • BioModels Database: a free, centralized database of curated, published, quantitative kinetic models of biochemical and cellular systems
    • 10.1093/nar/gkj092, 1347454, 16381960
    • Le Novere N, Bornstein B, Broicher A, Courtot M, Donizelli M, Dharuri H, Li L, Sauro H, Schilstra M, Shapiro B, et al. BioModels Database: a free, centralized database of curated, published, quantitative kinetic models of biochemical and cellular systems. Nucleic Acids Research 2006, (34 Database):D689. 10.1093/nar/gkj092, 1347454, 16381960.
    • (2006) Nucleic Acids Research , Issue.34 DATABASE
    • Le Novere, N.1    Bornstein, B.2    Broicher, A.3    Courtot, M.4    Donizelli, M.5    Dharuri, H.6    Li, L.7    Sauro, H.8    Schilstra, M.9    Shapiro, B.10
  • 13
    • 11244298711 scopus 로고
    • The evolution of a source code control system
    • Glasser A. The evolution of a source code control system. ACM SIGSOFT Software Engineering Notes 1978, 3(5):122-125.
    • (1978) ACM SIGSOFT Software Engineering Notes , vol.3 , Issue.5 , pp. 122-125
    • Glasser, A.1
  • 14
    • 0022100234 scopus 로고
    • RCS - A System for Version Control
    • Tichy W. RCS - A System for Version Control. Software - Practice and Experience 1985, 15(7):637-654.
    • (1985) Software - Practice and Experience , vol.15 , Issue.7 , pp. 637-654
    • Tichy, W.1
  • 15
    • 0003553233 scopus 로고    scopus 로고
    • Version management with CVS
    • Cederqvist P, Pesch R, et al. Version management with CVS. 2002,
    • (2002)
    • Cederqvist, P.1    Pesch, R.2
  • 19
    • 84888283677 scopus 로고    scopus 로고
    • Monotone: reliable, distributed version control
    • Monotone: reliable, distributed version control. , http://www.monotone.ca/
  • 20
    • 79551577929 scopus 로고    scopus 로고
    • GIT-fast version control system
    • Torvalds L, Hamano J. GIT-fast version control system. 2005,
    • (2005)
    • Torvalds, L.1    Hamano, J.2
  • 21
    • 84888275301 scopus 로고    scopus 로고
    • Distributed revision control with Mercurial
    • O'Sullivan B. Distributed revision control with Mercurial. Mercurial project 2007,
    • (2007) Mercurial project
    • O'Sullivan, B.1
  • 22
    • 65149101663 scopus 로고    scopus 로고
    • Version control of pathway models using XML patches
    • 10.1186/1752-0509-3-34, 2674044, 19292901
    • Saffrey P, Orton R. Version control of pathway models using XML patches. BMC Systems Biology 2009, 3:34. 10.1186/1752-0509-3-34, 2674044, 19292901.
    • (2009) BMC Systems Biology , vol.3 , pp. 34
    • Saffrey, P.1    Orton, R.2
  • 23
    • 50049131641 scopus 로고    scopus 로고
    • Practical application of CellML 1.1: The integration of new mechanisms into a human ventricular myocyte model
    • 10.1016/j.pbiomolbio.2008.05.006, 18606438
    • Nickerson D, Buist M. Practical application of CellML 1.1: The integration of new mechanisms into a human ventricular myocyte model. Progress in biophysics and molecular biology 2008, 98:38-51. 10.1016/j.pbiomolbio.2008.05.006, 18606438.
    • (2008) Progress in biophysics and molecular biology , vol.98 , pp. 38-51
    • Nickerson, D.1    Buist, M.2
  • 26
    • 35649001607 scopus 로고
    • A Quantitative Description of Membrane Current and its Application to Conduction and Excitation in Nerve
    • 1392413, 12991237
    • Hodgkin A, Huxley A. A Quantitative Description of Membrane Current and its Application to Conduction and Excitation in Nerve. J Physiol 1952, 117:500-544. 1392413, 12991237.
    • (1952) J Physiol , vol.117 , pp. 500-544
    • Hodgkin, A.1    Huxley, A.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.