Highly selective l-threonine 3-dehydrogenase from Cupriavidus necator and its use in determination of l-threonine

Analytical Biochemistry

Volumn 410, Issue 1, 2011, Pages 44-56

  Ueatrongchit, Techawaree ^a   Asano, Yasuhisa ^a  

^a TOYAMA PREFECTURAL UNIVERSITY   (Japan)

Author keywords

Cupriavidus necator; Endpoint assay; Enzymatic determination; l Threonine 3 dehydrogenase; Threonine determination

Indexed keywords

BLOOD; DIAGNOSIS; ENZYMES; METABOLISM; MICROORGANISMS; NITROGEN PLASMA; SCREENING; SUBSTRATES; ZINC;

ARABIDOPSIS THALIANA; CUPRIAVIDUS NECATOR; ENZYMATIC DETERMINATION; L-THREONINE 3-DEHYDROGENASE; MEDIUM-CHAIN ALCOHOLS; SHORT CHAIN ALCOHOLS; THREONINE DETERMINATION; ZINC-BINDING DOMAINS;

AMINO ACIDS;

3 HYDROXYNORVALINE; ALCOHOL DEHYDROGENASE; ALCOHOL DERIVATIVE; AMINO ACID DERIVATIVE; AMINOALCOHOL; GLYCINE; GUANOSINE DIPHOSPHATE MANNOSE; OXIDOREDUCTASE; THREONINE; THREONINE 3 DEHYDROGENASE; UNCLASSIFIED DRUG;

ARABIDOPSIS; ARTICLE; BLOOD LEVEL; CONTROLLED STUDY; CUPRIAVIDUS NECATOR; ENZYME ACTIVITY; ENZYME ANALYSIS; ENZYME ASSAY; ENZYME PURIFICATION; ENZYME SPECIFICITY; ENZYME STABILITY; HUMAN; MOLECULAR CLONING; NONHUMAN; NUCLEOTIDE SEQUENCE; PH MEASUREMENT; PRIORITY JOURNAL; TEMPERATURE MEASUREMENT;

ANIMALIA; ARABIDOPSIS THALIANA; BACTERIA (MICROORGANISMS); CUPRIAVIDUS NECATOR;

EID: 78651352708     PISSN: 00032697     EISSN: 10960309     Source Type: Journal    
DOI: 10.1016/j.ab.2010.11.003     Document Type: Article

References (57)

1. M. Faure, D. Moennoz, F. Montigon, C. Mettraux, D. Breuille, and O. Ballevre Dietary threonine restriction specifically reduces intestinal mucin synthesis in rats J. Nutr. 135 2005 486 491
2. P.S. Parimi, L.L. Gruca, and S.C. Kalha Metabolism of threonine in newborn infants Am. J. Physiol. Endocrinol. Metab. 289 2005 E981 E985
3. S. Ebara, S. Toyoshima, T. Matsumura, S. Adachi, S. Takenaka, R. Yamaji, F. Watanabe, K. Miyatake, H. Inui, and Y. Nakano Cobalamin deficiency results in severe metabolic disorder of serine and threonine in rats Biochim. Biophys. Acta 1568 2001 111 117
4. Y. Kamiya, T. Horikoshi, H. Takagi, S. Okada, and K. Hashimoto Type II citrullinemia associated with neutropenia Internal Medicine 34 1995 679 682
5. M. Faure, F. Chone, C. Mettraux, J.P. Godin, F. Bechereau, J. Vuichoud, I. Papet, D. Breuille, and C. Obled Threonine Utilization for synthesis of acute phase proteins, intestinal proteins, and mucins is increased during sepsis in rats J. Nutr. 137 2007 1802 1807
6. J.K. Tews, Y.L. Kim, and A.E. Harper Induction of threonine imbalance by dispensable amino acids: relationships between tissue amino acids and diet in rats J. Nutr. 110 1980 394 408
7. S.I. Barr, and C.A. Rideout Nutritional considerations for vegetarian athletes Nutrition 20 2004 696 703
8. M. Krajcovicova-Kudlackova, K. Babinska, and M. Valachovicova Health benefits and risks of plant proteins Bratisl Lek Listy [Bratisl. Med. J.] 106 2005 231 234
9. A. Hamard, B. Sve, and N. Le Floc'h A moderate threonine deficiency differently affects protein metabolism in tissues of early-weaned piglets Comp. Biochem. Physiol. A: Mol. Integr. Physiol. 152 2009 491 497
10. S. Tachibana, M. Suzuki, and Y. Asano Application of an enzyme chip to the microquantification of L-phenylalanine Anal. Biochem. 359 2006 72 78
11. R.J. Block, and D. Bolling The microestimation of threonine J. Biol. Chem. 130 1939 365 374
12. L.A. Shin, and B.H. Nicolet The determination of threonine by the use of periodate J. Biol. Chem. 138 1941 91 96
13. G. Fang, and N. Liu Determination of eight essential amino acids in mixtures by chemometrics-spectrophotometry without separation Anal. Chim. Acta 445 2001 245 253
14. K. Watanabe, N. Itoh, A. Tanaka, and S. Fukui Application of an immobilized Escherichia coli cell tube in analysis of L-threonine Agric. Biol. Chem. 46 1982 119 126
15. T. Nishida, S. Kume, M. Saito, and M. Suda A specific method for the determination of threonine in rat blood plasma using aldehyde dehydrogenase J. Biochem. 81 1977 1085 1090
16. E.B. Newman, V. Kapoor, and R. Potter Role of L-threonine dehydrogenase in the catabolism of threonine and synthesis of glycine by Escherichia coli J. Bacteriol. 126 1976 1245 1249
17. J.H. Yuan, and R.E. Austic Characterization of hepatic L-threonine dehydrogenase of chicken Comp. Biochem. Physiol. 130 2001 65 73
18. M. Ray, and S. Ray L-Threonine dehydrogenase from goat liver J. Biol. Chem. 260 1985 5916 5918
19. Y. Aoyama, and Y. Motokawa L-Threonine dehydrogenase of chicken liver J. Biol. Chem. 256 1981 12367 12373
20. S. Akagi, K. Sato, and S. Ohmori Threonine metabolism in Japanese quail liver Amino acids 26 2004 235 242
21. A.J. Edgar Molecular cloning and tissue distribution of mammalian L-threonine 3-dehydrogenases BMC Biochem. 3 2002 19
22. J.P. Marcus, and E.E. Dekker pH-Dependent decarboxylation of 2-amino-3-ketobutyrate, the unstable intermediate in the threonine dehydrogenase-initiated pathway for threonine utilization Biochem. Biophys. Res. Commun. 190 1993 1066 1072
23. J.P. Marcus, and E.E. Dekker Threonine formation via the coupled activity of 2-amino-3-ketobutyrate coenzyme A lyase and threonine dehydrogenase J. Bacteriol. 175 1993 6505 6511
24. D. McGilvray, and J.G. Morris H. Tabor, C.W. Tabor, Method in Enzymology vol. 17, part B 1971 Academic Press New York 580 584
25. S.A. Boylan, and E.E. Dekker L-Threonine dehydrogenase. Purification and properties of the homogeneous enzyme from Escherichia coli K-12 J. Biol. Chem. 256 1981 1809 1815
26. T. Kazuoka, S. Takigawa, N. Arakawa, Y. Hizukuri, I. Muraoka, T. Oikawa, and K. Soda Novel Psychrophilic and thermolabile L-threonine dehydrogenase from Psychrophilic Cytophaga sp. strain KUC-1 J. Bacteriol. 15 2003 4483 4489
27. M. Wagner, and J.R. Andreesen Purification and characterization of threonine dehydrogenase from Clostridium sticklandii Arch. Microbiol. 163 1995 286 290
28. R. Machielsen, and J. van der Oost Production and characterization of a thermostable L-threonine dehydrogenase from the hyperthermophilic archaeon Pyrococcus furiosus FEBS J. 273 2006 2722 2729
29. Y. Shimizu, H. Sakuraba, R. Kawakami, S. Goda, Y. Kawarabayasi, and T. Ohshima L-Threonine dehydrogenase from the hyperthermophilic archaeon Pyrococcus horikoshii OT3: gene cloning and enzymatic characterization Extremophiles 9 2005 317 324 (Pubitemid 41187700)
30. Q. Bashir, N. Rashid, F. Jamil, T. Imanaka, and M. Akhtar Highly thermostable L-threonine dehydrogenase from the hyperthermophilic archaeon Thermococcus kodakaraensis J. Biochem. 146 2009 95 102
31. Y. Bao, H. Xie, J. Shan, R. Jiang, Y. Zhang, L. Guo, R. Zhang, and Y. Li Biochemical characteristics and function of a threonine dehydrogenase encoded by ste11 in Ebosin biosynthesis of Streptomyces sp. 139 J. Appl. Microbiol. 106 2009 1140 1146
32. B.D. Aronson, R.L. Somerville, B.R. Epperly, and E.E. Dekker The primary structure of Escherichia coli L-threonine dehydrogenase J. Biol. Chem. 264 1989 5226 5232
33. N. Higashi, K. Tanimoto, M. Nishioka, K. Ishikawa, and M. Taya Investigating a catalytic mechanism of hyperthermophilic L-threonine dehydrogenase from Pyrococcus horikoshii J. Biochem. 144 2008 77 85
34. A. Bowyer, H. Mikolajek, J.W. Stuart, S.P. Wood, F. Jamil, N. Rashid, M. Akhtar, and J.B. Cooper Structure and function of the L-threonine dehydrogenase (TkTHRDH) from the hyperthermophilic archaeon Thermococcus kodakaraensis J. Struct. Biol. 168 2009 294 304
35. K. Ishikawa, N. Higashi, T. Nakamura, T. Matsuura, and A. Nakagawa The first crystal structure of L-threonine dehydrogenase J. Mol. Biol. 366 2007 857 867
36. N. Higashi, H. Fukada, and K. Ishikawa Kinetic study of thermostable L-threonine dehydrogenase from an archaeon Pyrococcus horikoshii J. Biosci. Bioeng. 99 2005 175 180
37. U.K. Laemmli Cleavage of structural proteins during the assembly of the head of bacteriophage T4 Nature 227 1970 680 685
38. H. Saito, and K. Miura Preparation of transforming deoxyribonucleic acid by phenol treatment Biochim. Biophys. Acta 72 1963 619 629
39. K.L. Kavanagh, H. Jörnvall, B. Persson, and U. Oppermann The SDR superfamily: functional and structural diversity within a family of metabolic and regulatory enzymes Cell Mol. Life Sci. 65 2008 3895 3906
40. U. Oppermann, C. Filling, M. Hult, N. Shafqat, X. Wu, M. Lindh, J. Shafqat, E. Nordling, Y. Kallberg, B. Persson, and H. Jörnvall Short-chain dehydrogenases/reductases (SDR): the 2002 update Chem. Biol. Interact. 143-144 2003 247 253
41. L.L. Major, B.A. Wolucka, and J.H. Naismith Structure and function of GDP-mannose-3',5'-epimerase: an enzyme which performs three chemical reactions at the same active site J. Am. Chem. Soc. 127 2005 18309 18320
42. W.C. Rose, M.J. Coon, H.B. Lockhart, and G.F. Lambert The amino acid requirements of man. XI. The threonine and methionine requirements J. Biol. Chem. 215 1955 101 110
43. 13C]phenylalanine Am. J. Clin. Nutr. 71 2000 757 764
44. N.L. Nichols, and R.F. Bertolo Luminal threonine concentration acutely affects intestinal mucosal protein and mucin synthesis in piglets J. Nutr. 138 2008 1298 1303
45. G.K. Law, R.F. Bertolo, A. Adjiri-Awere, P.B. Pencharz, and R.O. Ball Adequate oral threonine is critical for mucin production and gut function in neonatal piglets Am. J. Physiol. Gastrointest. Liver Physiol. 292 2007 1293 1301
46. X. Wang, S. Qiao, Y. Yin, L. Yue, Z. Wang, and G. Wu A deficiency or excess of dietary threonine reduces protein synthesis in jejunum and skeletal muscle of young pigs J. Nutr. 137 2007 1442 1446
47. A. Hamard, D. Mazurais, G. Boudry, I.L. Huërou-Luron, B. Sve, and N. Le Floc'h A moderate threonine deficiency affects gene expression profile, paracellular permeability and glucose absorption capacity in the ileum of piglets J. Nutr. Biochem. 21 2010 914 921
48. D.H. Williamson, O. Lopes-vieira, and B. Walker Concentrations of free glucogenic amino acids in livers of rats subjected to various metabolic stresses Biochem. J. 104 1976 497 502
49. T. Iida, S. Machida, N. Iijima, and T. Mitamura L-threonine deaminase from thermophilic bacterium Bacillus stearothermophilus in ammonia sensor for L-threonine determination Anal. Chem. Symp. Ser. 17 1983 631 636
50. P. Vandamme, and T. Coenye Taxonomy of the genus Cupriavidus: a tale of lost and found Int. J. Syst. Evol. Microbiol. 54 2004 2285 2289
51. J.D. Gelder, D. Willemse-Erix, M.J. Scholtes, J.I. Sanchez, K. Maquelin, P. Vandenabeele, P. De Boever, G.J. Puppels, L. Moens, and P. de Vos Monitoring Poly(3-hydroxybutyrate) production in Cupriavidus necator DSM428 (H16) with Raman spectroscopy Anal. Chem. 80 2008 2155 2160
52. H.E. Valentin, D.L. Broyles, L.A. Casagrande, S.M. Colburn, W.L. Creely, P.A. DeLaquil, H.M. Felton, K.A. Gonzalez, K.L. Houmiel, K. Lutke, D.A. Mahadeo, T.A. Mitsky, S.R. Padgette, S.E. Reiser, S. Slater, D.M. Stark, R.T. Stock, D.A. Stone, N.B. Taylor, G.M. Thorne, M. Tran, and K.J. Gruys PHA production, from bacteria to plants Int. J. Biol. Macromol. 25 1999 303 306
53. J. Wang, and J. Yu Kinetic analysis on inhibited growth and poly(3-hydroxybutyrate) formation of Alcaligenes eutrophus on acetate under nutrient-rich conditions Process Biochem. 36 2000 201 207
54. Y. Chen, H. Yang, Q. Zhou, J. Chen, and G. Gu Cleaner recovery of poly(3-hydroxybutyric acid) synthesized in Alcaligenes eutrophus Process Biochem. 36 2001 501 506
55. Y. Kallberg, U. Oppermann, and B. Persson Classification of the short-chain dehydrogenase/reductase superfamily using hidden Markov models FEBS J. 277 2010 2375 2386
56. B. Persson, Y. Kallberg, J.E. Bray, E. Bruford, S.L. Dellaporta, A.D. Favia, R.G. Duarte, H. Jörnvall, K.L. Kavanagh, N. Kedishvili, M. Kisiela, E. Maser, R. Mindnich, S. Orchard, T.M. Penning, J.M. Thornton, J. Adamski, and U. Oppermann The SDR (short-chain dehydrogenase/reductase and related enzymes) nomenclature initiative Chem. Biol. Interact. 178 2009 94 98
57. M. Flavin, and C. Slaughter Rapid and specific determination of threonine Anal. Chem. 31 1959 1983 1984