-
1
-
-
31544450286
-
Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: The Keio collection
-
T. Baba, T. Ara, M. Hasegawa, Y. Takai, Y. Okumura, and M. Baba Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: The Keio collection Mol. Syst. Biol. 2 2006 0008
-
(2006)
Mol. Syst. Biol.
, vol.2
, pp. 0008
-
-
Baba, T.1
Ara, T.2
Hasegawa, M.3
Takai, Y.4
Okumura, Y.5
Baba, M.6
-
2
-
-
0036226260
-
Nitrite reductase of Nitrosomonas europaea is not essential for production of gaseous nitrogen oxides and confers tolerance to nitrite
-
H.J.E. Beaumont, N.G. Hommes, L.A. Sayavedra-Soto, D.J. Arp, D.M. Arciero, and A.B. Hooper Nitrite reductase of Nitrosomonas europaea is not essential for production of gaseous nitrogen oxides and confers tolerance to nitrite J. Bacteriol. 184 2002 2557 2560
-
(2002)
J. Bacteriol.
, vol.184
, pp. 2557-2560
-
-
Beaumont, H.J.E.1
Hommes, N.G.2
Sayavedra-Soto, L.A.3
Arp, D.J.4
Arciero, D.M.5
Hooper, A.B.6
-
3
-
-
34249801778
-
Transcription of all amoC copies is associated with recovery of Nitrosomonas europaea from ammonia starvation
-
P.M. Berube, R. Samudrala, and D.A. Stahl Transcription of all amoC copies is associated with recovery of Nitrosomonas europaea from ammonia starvation J. Bacteriol. 189 2007 3935 3944
-
(2007)
J. Bacteriol.
, vol.189
, pp. 3935-3944
-
-
Berube, P.M.1
Samudrala, R.2
Stahl, D.A.3
-
4
-
-
34548665995
-
Role of nitrite reductase in the ammonia-oxidizing pathway of Nitrosomonas europaea
-
J.J. Cantera, and L.Y. Stein Role of nitrite reductase in the ammonia-oxidizing pathway of Nitrosomonas europaea Arch. Microbiol. 188 2007 349 354
-
(2007)
Arch. Microbiol.
, vol.188
, pp. 349-354
-
-
Cantera, J.J.1
Stein, L.Y.2
-
5
-
-
0037408431
-
Complete genome sequence of the ammonia-oxidizing bacterium and obligate chemolithoautotroph Nitrosomonas europaea
-
P. Chain, J. Lamerdin, F. Larimer, W. Regala, V. Lao, and M. Land Complete genome sequence of the ammonia-oxidizing bacterium and obligate chemolithoautotroph Nitrosomonas europaea J. Bacteriol. 185 2003 2759 2773
-
(2003)
J. Bacteriol.
, vol.185
, pp. 2759-2773
-
-
Chain, P.1
Lamerdin, J.2
Larimer, F.3
Regala, W.4
Lao, V.5
Land, M.6
-
6
-
-
33745172807
-
Transcriptome of a Nitrosomonas europaea mutant with a disrupted nitrite reductase gene (nirK)
-
C.M. Cho, T. Yan, X. Liu, L. Wu, J. Zhou, and L.Y. Stein Transcriptome of a Nitrosomonas europaea mutant with a disrupted nitrite reductase gene (nirK) Appl. Environ. Microbiol. 72 2006 4450 4454
-
(2006)
Appl. Environ. Microbiol.
, vol.72
, pp. 4450-4454
-
-
Cho, C.M.1
Yan, T.2
Liu, X.3
Wu, L.4
Zhou, J.5
Stein, L.Y.6
-
7
-
-
0034612342
-
One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products
-
K.A. Datsenko, and B.L. Wanner One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products Proc. Natl. Acad. Sci. USA 97 2000 6640 6645
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.97
, pp. 6640-6645
-
-
Datsenko, K.A.1
Wanner, B.L.2
-
8
-
-
0027534951
-
In vitro activation of ammonia monooxygenase from Nitrosomonas europaea by copper
-
S.A. Ensign, M.R. Hyman, and D.J. Arp In vitro activation of ammonia monooxygenase from Nitrosomonas europaea by copper J. Bacteriol. 175 1993 1971 1980
-
(1993)
J. Bacteriol.
, vol.175
, pp. 1971-1980
-
-
Ensign, S.A.1
Hyman, M.R.2
Arp, D.J.3
-
9
-
-
35148871244
-
Expression and functional characterization of gfpmut3.1 and its unstable variants in Staphylococcus epidermidis
-
G.C. Franke, S. Dobinsky, D. Mack, C.J. Wang, I. Sobottka, and M. Christner Expression and functional characterization of gfpmut3.1 and its unstable variants in Staphylococcus epidermidis J. Microbiol. Methods 71 2007 123 132
-
(2007)
J. Microbiol. Methods
, vol.71
, pp. 123-132
-
-
Franke, G.C.1
Dobinsky, S.2
MacK, D.3
Wang, C.J.4
Sobottka, I.5
Christner, M.6
-
10
-
-
71549149010
-
One-dimensional gel electrophoresis
-
D.E. Garfin One-dimensional gel electrophoresis R.R. Burges, M.P. Deutscher, Methods in Enzymology 2009 Elsevier San Francisco 497 513
-
(2009)
Methods in Enzymology
, pp. 497-513
-
-
Garfin, D.E.1
-
11
-
-
63949086726
-
Construction of recombinant Nitrosomonas europaea expressing green fluorescent protein in response to co-oxidation of chloroform
-
B.O. Gvakharia, P.J. Bottomley, D.J. Arp, and L.A. Sayavedra-Soto Construction of recombinant Nitrosomonas europaea expressing green fluorescent protein in response to co-oxidation of chloroform Appl. Microbiol. Biotechnol. 82 2009 1179 1185
-
(2009)
Appl. Microbiol. Biotechnol.
, vol.82
, pp. 1179-1185
-
-
Gvakharia, B.O.1
Bottomley, P.J.2
Arp, D.J.3
Sayavedra-Soto, L.A.4
-
12
-
-
77957012892
-
Nitrate reductase in higher plants
-
R.H. Hageman, and D.P. Hucklesby Nitrate reductase in higher plants Meth. Enzymol. 23 1971 491 503
-
(1971)
Meth. Enzymol.
, vol.23
, pp. 491-503
-
-
Hageman, R.H.1
Hucklesby, D.P.2
-
13
-
-
33747849875
-
Transcriptional analysis of the multicopy hao gene coding for hydroxylamine oxidoreductase in Nitrosomonas sp. strain ENI-11
-
R. Hirota, A. Kuroda, T. Ikeda, N. Takiguchi, H. Ohtake, and J. Kato Transcriptional analysis of the multicopy hao gene coding for hydroxylamine oxidoreductase in Nitrosomonas sp. strain ENI-11 Biosci. Biotechnol. Biochem. 70 2006 1875 1881
-
(2006)
Biosci. Biotechnol. Biochem.
, vol.70
, pp. 1875-1881
-
-
Hirota, R.1
Kuroda, A.2
Ikeda, T.3
Takiguchi, N.4
Ohtake, H.5
Kato, J.6
-
14
-
-
0029948745
-
Mutagenesis of hydroxylamine oxidoreductase in Nitrosomonas europaea by transformation and recombination
-
N.G. Hommes, L.A. Sayavedra-Soto, and D.J. Arp Mutagenesis of hydroxylamine oxidoreductase in Nitrosomonas europaea by transformation and recombination J. Bacteriol. 178 1996 3710 3714
-
(1996)
J. Bacteriol.
, vol.178
, pp. 3710-3714
-
-
Hommes, N.G.1
Sayavedra-Soto, L.A.2
Arp, D.J.3
-
15
-
-
15644373219
-
Mutagenesis and expression of amo, which codes for ammonia monooxygenase in Nitrosomonas europaea
-
N.G. Hommes, L.A. Sayavedra-Soto, and D.J. Arp Mutagenesis and expression of amo, which codes for ammonia monooxygenase in Nitrosomonas europaea J. Bacteriol. 180 1998 3353 3359
-
(1998)
J. Bacteriol.
, vol.180
, pp. 3353-3359
-
-
Hommes, N.G.1
Sayavedra-Soto, L.A.2
Arp, D.J.3
-
16
-
-
0036428681
-
The roles of the three gene copies encoding hydroxylamine oxidoreductase in Nitrosomonas europaea
-
N.G. Hommes, L.A. Sayavedra-Soto, and D.J. Arp The roles of the three gene copies encoding hydroxylamine oxidoreductase in Nitrosomonas europaea Arch. Microbiol. 178 2002 471 476
-
(2002)
Arch. Microbiol.
, vol.178
, pp. 471-476
-
-
Hommes, N.G.1
Sayavedra-Soto, L.A.2
Arp, D.J.3
-
17
-
-
0344393479
-
Chemolithoorganotrophic growth of Nitrosomonas europaea on fructose
-
N.G. Hommes, L.A. Sayavedra-Soto, and D.J. Arp Chemolithoorganotrophic growth of Nitrosomonas europaea on fructose J. Bacteriol. 185 2003 6809 6814
-
(2003)
J. Bacteriol.
, vol.185
, pp. 6809-6814
-
-
Hommes, N.G.1
Sayavedra-Soto, L.A.2
Arp, D.J.3
-
18
-
-
33644912328
-
Disruption of sucA, which encodes the E1 subunit of alpha-ketoglutarate dehydrogenase, affects the survival of Nitrosomonas europaea in stationary phase
-
N.G. Hommes, E.G. Kurth, L.A. Sayavedra-Soto, and D.J. Arp Disruption of sucA, which encodes the E1 subunit of alpha-ketoglutarate dehydrogenase, affects the survival of Nitrosomonas europaea in stationary phase J. Bacteriol. 188 2006 343 347
-
(2006)
J. Bacteriol.
, vol.188
, pp. 343-347
-
-
Hommes, N.G.1
Kurth, E.G.2
Sayavedra-Soto, L.A.3
Arp, D.J.4
-
19
-
-
0026610274
-
2-labeling studies of the de novo synthesis of polypeptides by Nitrosomonas europaea during recovery from acetylene and light inactivation of ammonia monooxygenase
-
2-labeling studies of the de novo synthesis of polypeptides by Nitrosomonas europaea during recovery from acetylene and light inactivation of ammonia monooxygenase J. Biol. Chem. 267 1992 1534 1545
-
(1992)
J. Biol. Chem.
, vol.267
, pp. 1534-1545
-
-
Hyman, M.R.1
Arp, D.J.2
-
20
-
-
0032190420
-
A bioluminescence assay using Nitrosomonas europaea for rapid and sensitive detection of nitrification inhibitors
-
T. Iizumi, M. Mizumoto, and K. Nakamura A bioluminescence assay using Nitrosomonas europaea for rapid and sensitive detection of nitrification inhibitors Appl. Environ. Microbiol. 64 1998 3656 3662
-
(1998)
Appl. Environ. Microbiol.
, vol.64
, pp. 3656-3662
-
-
Iizumi, T.1
Mizumoto, M.2
Nakamura, K.3
-
21
-
-
33748762204
-
Complete genome sequence of the marine, chemolithoautotrophic, ammonia-oxidizing bacterium Nitrosococcus oceani ATCC 19707
-
M.G. Klotz, D.J. Arp, P.S. Chain, A.F. El-Sheikh, L.J. Hauser, and N.G. Hommes Complete genome sequence of the marine, chemolithoautotrophic, ammonia-oxidizing bacterium Nitrosococcus oceani ATCC 19707 Appl. Environ. Microbiol. 72 2006 6299 6315
-
(2006)
Appl. Environ. Microbiol.
, vol.72
, pp. 6299-6315
-
-
Klotz, M.G.1
Arp, D.J.2
Chain, P.S.3
El-Sheikh, A.F.4
Hauser, L.J.5
Hommes, N.G.6
-
22
-
-
0033031856
-
Construction of a highly bioluminescent Nitrosomonas as a probe for nitrification conditions
-
C. Ludwig, S. Ecker, K. Schwindel, H.G. Rast, K.O. Stetter, and G. Eberz Construction of a highly bioluminescent Nitrosomonas as a probe for nitrification conditions Arch. Microbiol. 172 1999 45 50
-
(1999)
Arch. Microbiol.
, vol.172
, pp. 45-50
-
-
Ludwig, C.1
Ecker, S.2
Schwindel, K.3
Rast, H.G.4
Stetter, K.O.5
Eberz, G.6
-
23
-
-
0002972659
-
Assay of β-galactosidase
-
Cold Spring Harbor Laboratory Cold Spring Harbor, NY
-
J.H. Miller Assay of β-galactosidase Experiments in Molecular Biology 1972 Cold Spring Harbor Laboratory Cold Spring Harbor, NY 352 355
-
(1972)
Experiments in Molecular Biology
, pp. 352-355
-
-
Miller, J.H.1
-
24
-
-
0030996777
-
An improved GFP cloning cassette designed for prokaryotic transcriptional fusions
-
W.G. Miller, and S.E. Lindow An improved GFP cloning cassette designed for prokaryotic transcriptional fusions Gene 191 1997 149 153
-
(1997)
Gene
, vol.191
, pp. 149-153
-
-
Miller, W.G.1
Lindow, S.E.2
-
27
-
-
0027134384
-
Small broad-host-range gentamycin resistance gene cassettes for site-specific insertion and deletion mutagenesis
-
H.D. Schweizer Small broad-host-range gentamycin resistance gene cassettes for site-specific insertion and deletion mutagenesis Biotechniques 15 1993 831 834
-
(1993)
Biotechniques
, vol.15
, pp. 831-834
-
-
Schweizer, H.D.1
-
28
-
-
0031680232
-
Loss of ammonia monooxygenase activity in Nitrosomonas europaea upon exposure to nitrite
-
L.Y. Stein, and D.J. Arp Loss of ammonia monooxygenase activity in Nitrosomonas europaea upon exposure to nitrite Appl. Environ. Microbiol. 64 1998 4098 4102
-
(1998)
Appl. Environ. Microbiol.
, vol.64
, pp. 4098-4102
-
-
Stein, L.Y.1
Arp, D.J.2
-
30
-
-
35948986372
-
Whole-genome analysis of the ammonia-oxidizing bacterium, Nitrosomonas eutropha C91: Implications for niche adaptation
-
L.Y. Stein, D.J. Arp, P.M. Berube, P.S. Chain, L. Hauser, and M.S. Jetten Whole-genome analysis of the ammonia-oxidizing bacterium, Nitrosomonas eutropha C91: Implications for niche adaptation Environ. Microbiol. 9 2007 2993 3007
-
(2007)
Environ. Microbiol.
, vol.9
, pp. 2993-3007
-
-
Stein, L.Y.1
Arp, D.J.2
Berube, P.M.3
Chain, P.S.4
Hauser, L.5
Jetten, M.S.6
-
32
-
-
0036405431
-
Effect of culture conditions on growth of green algaHaematococcus pluvialis and astaxanthin production
-
T. Usha, L.R. Sarada, and G.A. Ravishankar Effect of culture conditions on growth of green algaHaematococcus pluvialis and astaxanthin production Acta Physiol. Plant. 24 2002 323 329
-
(2002)
Acta Physiol. Plant.
, vol.24
, pp. 323-329
-
-
Usha, T.1
Sarada, L.R.2
Ravishankar, G.A.3
-
34
-
-
37449006225
-
Characterization of the ferrioxamine uptake system of Nitrosomonas europaea
-
X. Wei, L.A. Sayavedra-Soto, and D.J. Arp Characterization of the ferrioxamine uptake system of Nitrosomonas europaea Microbiology 153 2007 3963 3972
-
(2007)
Microbiology
, vol.153
, pp. 3963-3972
-
-
Wei, X.1
Sayavedra-Soto, L.A.2
Arp, D.J.3
-
35
-
-
0034663575
-
Electron transfer during the oxidation of ammonia by the chemolithotrophic bacterium Nitrosomonas europaea
-
M. Whittaker, D. Bergmann, D. Arciero, and A.B. Hooper Electron transfer during the oxidation of ammonia by the chemolithotrophic bacterium Nitrosomonas europaea Biochim. Biophys. Acta 1459 2000 346 355
-
(2000)
Biochim. Biophys. Acta
, vol.1459
, pp. 346-355
-
-
Whittaker, M.1
Bergmann, D.2
Arciero, D.3
Hooper, A.B.4
|