Range-wide population genetic structure of the pallid bat (Antrozous pallidus) - Incongruent results from nuclear and mitochondrial DNA

Acta Chiropterologica

Volumn 12, Issue 2, 2010, Pages 401-413

  Lack, Justin B ^a   Wilkinson, Jeremy E ^a   Van Den Bussche, Ronald A ^a  

^a OKLAHOMA STATE UNIVERSITY   (United States)

Author keywords

AFLP; Antrozous pallidus; philopatry; phylogeography; Pliocene; sex biased dispersal

Indexed keywords

BAT; CLUSTER ANALYSIS; GENE FLOW; GENETIC STRUCTURE; MITOCHONDRIAL DNA; PHILOPATRY; PHYLOGEOGRAPHY; PLIOCENE; POLYMORPHISM; POPULATION GENETICS;

ANTROZOUS; ANTROZOUS PALLIDUS; MAMMALIA;

EID: 78650864379     PISSN: 15081109     EISSN: None     Source Type: Journal    
DOI: 10.3161/150811010X537981     Document Type: Article

References (67)

1. ARNOLD, B. D. 2007. Population structure and sex-biased dispersal in the forest dwelling vespertilionid bat, Myotis se ptentrionalis. The American Midland Naturalist, 157: 374-384.
2. AVISE, J. C., R. T. ALISAUSKAS, W. S. NELSON, and C. D. ANKNEY. 1992. Matriarchal population genetic structure in an avian species with female natal philopatry. Evolution, 46: 1084-1096.
3. BENSCH, S., D. E. IRWIN, J. H. IRWIN, L. KVIST, and S. AKESSON. 2006. Conflicting patterns of mitochondrial and nuclear DNA diversity in Phylloscopus warblers. Molecular Ecology, 15: 161-171.
4. BRADLEY, R. D., and R. J. BAKER. 2001. A test of the genetic species concept: cytochrome-b sequences and mammals. Journal of Mammalogy, 82: 960-973.
5. BRADLEY, R. D., and R. J. BAKER. 2006. Speciation in mammals and the genetic species concept. Journal of Mammalogy, 87: 643-662.
6. BRYJA, J., P. KAÒUCH, A. FORNÙSKOV, T. BARTONIÈKA, and Z. øEHK. 2009. Low population genetic structuring of two cryptic bat species suggests their migratory behaviour in Europe. Biological Journal of the Linnean Society, 96: 103-114.
7. BUERKLE, C. A. 1999. The historical pattern of gene flow among migratory and nonmigratory populations of prairie warblers (Aves: Parulinae). Evolution, 53: 1915-1924.
8. BURNS, K. J., and D. N. BARHOUM. 2006. Population-level history of the wrentit (Chamaea fasciata): implications for comparative phylogeography in the California Floristic Province. Molecular Phylogenetics and Evolution, 38: 117-129.
9. BURNS, K. J., M. P. ALEXANDER, D. H. BARHOUM, and E. A. SGARIGLIA. 2007. Statistical assessment of congruence among phylogeographic histories of three avian species in the Cali fornia Floristic Province. Ornithological Monographs, 63: 96-109.
10. CALSBEEK, R., J. N. THOMPSON, and J. E. RICHARDSON. 2003. Patterns of molecular evolution and diversification in a biodiversity hotspot: the California Floristic Province. Molecular Ecology, 12: 1021-1029.
11. CASTELLA, V., M. RUEDI, and L. EXCOFFIER. 2001. Contrasted patterns of mitochondrial and nuclear structure among nursery colonies of the bat Myotis myotis. Journal of Evol utionary Biology, 14: 708-720.
12. CLOBERT, J., E. DANCHIN, A. A. DHONDT, and J. D. NICHOLS. 2001. Dispersal. Oxford University Press, Oxford, 452 pp.
13. DAVIS, W. B., and D. J. SCHMIDLY. 1994. The mammals of Texas. Texas Parks and Wildlife Press, Austin, TX, 550 pp.
14. DAVIS, L. A., E. H. ROALSON, K. L. CORNELL, K. D. MCCLANAHAN, and M. S. WEBSTER. 2006. Genetic divergence and migration patterns in a North American passerine bird: implications for evolution and conservation. Molecular Ecology, 15: 2141-2152.
15. DITCHFIELD, A. D. 2000. The comparative phylogeography of Neotropical mammals: patterns of intraspecific mitochondrial DNA variation among bats contrasted to nonvolant small mammals. Molecular Ecology, 9: 1307-1318.
16. EVANNO, G., S. REGNAUT, and J. GOUDET. 2005. Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study. Molecular Ecology, 14: 2611-2620.
17. FALUSH, D., M. STEPHENS, and J. K. PRITCHARD. 2007. Inference of population structure using multilocus genotype data: dominant markers and null alleles. Molecular Ecology Notes, 7: 574-578.
18. FELSENSTEIN, J. 2009. PHYLIP (Phylogeny Inference Package) version 3.69. Distributed by the author. Department of Genome Sciences, University of Washington, Seattle.
19. FINDLEY, J. S. 1969. Biogeography of southwestern boreal and desert animals. Pp. 113-128, in Contributions in mammalogy (J. K. JONES, JR., ed.). Miscellaneous Publications, Museum of Natural History, University of Kansas, 428 pp.
20. GALTIER, N., B. NABHOLZ, S. GLEMIN, and G. D. D. HURST. 2009. Mitochondrial DNA as a marker of molecular diversity: a reappraisal. Molecular Ecology, 18: 4541-4550.
21. GREENWOOD, P. J. 1980. Mating systems, philopatry and dispersal in birds and mammals. Animal Behaviour, 28: 1140-1162.
22. HAFNER, D. J., and B. R. RIDDLE. 1997. Biogeography of Baja California Peninsular Desert mammals. Pp. 39-68, in Life among the Muses: papers in Honor of James S. Findley (T. L. YATES, W. L. GANNON, and D. E. WILSON, eds.). The Mu s e um of Southwest Biology, Albuquerque, NM, 302 pp.
23. HALL, E. R. 1981. The mammals of North America, 2nd edition. John Wiley and Sons, New York, Volume 1, 1373 pp.
24. HANDLEY, L. J. L., and N. PERRIN. 2007. Advances in our understanding of mammalian sex-biased dispersal. Molecular Ecol ogy, 16: 1559-1578.
25. HARRISON, S. 1999. Local and regional diversity in a patchy landscape: native, alien, and endemic herbs on serpentine. Ecology, 80: 70-80.
26. HELLGREN, O., S. BENSCH, K. A. HOBSON, and A. LINDSTROM. 2008. Population structure and migratory directions of Scandinavian bluethroats Luscinia svecicaa molecular, morphological, and stable isotope analysis. Ecography, 31: 95-103.
27. HERMANSON, J. W., and T. J. O'SHEA. 1983. Antrozous pallidus. Mammalian Species, 213: 1-8.
28. HEWITT, G. M. 1996. Some genetic consequences of ice ages, and their role in divergence and speciation. Biological Journal of the Linnean Society, 58: 247-276.
29. HEWITT, G. M. 1999. Postglacial recolonization of European Biota. Biological Journal of the Linnean Society, 68: 87-112.
30. HEWITT, G. M. 2004. Genetic consequences of climatic oscillations in the Quaternary. Philosophical Transactions of the Royal Society of London, 359B: 183-195.
31. HOLSINGER, K. E., P. O. LEWIS, and D. K. DEY. 2002. A Baye sian approach to inferring population structure from dominant markers. Molecular Ecology, 11: 1157-1164.
32. HUBBARD, J. P. 1973. Avian evolution in the aridlands of North America. Living Bird, 12: 155-196.
33. IRWIN, D. E., S. BENSCH, J. H. IRWIN, and T. D. PRICE. 2005. Speciation by distance in a ring species. Science, 307, 414-416.
34. JAKOBSSON, M., and N. A. ROSENBERG. 2007. CLUMPP: a cluster matching and permutation program for dealing with label switching and multimodality in analysis of population structure. Bioinformatics, 23: 1801-1806.
35. KERTH, G., F. MAYER, and E. PETIT. 2002. Extreme sex-biased dispersal in the communally breeding, nonmigratory Bechstein's bat (Myotis bechsteinii). Molecular Ecology, 11: 1491-1498.
36. LLOYD, B. D. 2003. Intraspecific phylogeny of the New Zealand short-tailed bat, Mystacina tuberculata, inferred from multiple mitochondrial gene sequences. Systematic Biology, 52: 460-476.
37. MANTEL, N. 1967. The detection of disease clustering and a generalized regression approach. Cancer Research, 27: 209-220.
38. MCCRACKEN, G. F., M. K. MCCRACKEN, and A. T. VAWTER. 1994. Genetic structure in migratory populations of the bat Tadarida brasiliensis mexicana. Journal of Mammalogy, 75: 500-514.
39. MILLER-BUTTERWORTH, C. M., D. S. JACOBS, and E. H. HARLEY. 2003. Strong population substructure is correlated with morphology and ecology in a migratory bat. Nature, 424: 187-191.
40. MYERS, N., R. A. MITTERMEIER, C. G. MITTERMEIER, G. A. B. DA FONSECA, and J. KENT. 1999. Biodiversity hotspots for conservation priorities. Nature, 403: 853-858.
41. ORLOCI, L. 1978. Multivariate analysis in vegetation research. Dr. W. Junk B. V., The Hague, 276 pp.
42. ORR, R. T. 1954. Natural history of the pallid bat, Antrozous pallidus. Proceedings of the California Academy of Science, 28: 165-264.
43. O'SHEA, T. J., and T. A. VAUGHAN. 1977. Nocturnal and seasonal activities of the pallid bat, Antrozous pallidus. Journal of Mammalogy, 58: 269-284.
44. PATTERSON, B. D., V. PACHECO, and M. V. ASHLEY. 1992. On the origins of Western Slope endemism: systematics of figeating bats, genus Artibeus. Memoria del Museo de His toria Natural, UNMSM (Lima), 21: 189-205.
45. PEAKALL, R., and P. E. SMOUSE. 2006. Genalex 6: Genetic analysis in Excel. Population genetic software for research and teaching. Molecular Ecology Notes, 6: 288-295.
46. PETIT, E., and F. MAYER. 1999. Male dispersal in the noctule bat (Nyctalus noctula): where are the limits? Proceedings of the Royal Society of London Series, 266B: 1717-1722.
47. PETIT, E., and F. MAYER. 2000. A population genetic analysis of migration: the case of the noctule bat (Nyctalus noctula). Molecular Ecology, 9: 683-690.
48. PETIT, E., F. BALLOUX, and J. GOUDET. 2001. Sex-biased dispersal in a migratory bat: a characterization using sex-specific demographic parameters. Evolution, 55: 635-640.
49. PRITCHARD, J. K., and W. WEN. 2004. Documentation for STRUC TURE software: version 2. Available at http:// pritch.bsd.uchicago.edu.
50. PRITCHARD, J. K., M. STEPHENS, and P. DONNELLY. 2000. Inference of population structure using multilocus genotype data. Genetics, 155: 945-959.
51. RIDDLE, B. R. 1995. Molecular biogeography in the pocket mice (Perognathus and Chaetodipus) and grasshopper mice (Onychomys): the late Cenozoic development of a North America aridlands rodent guild. Journal of Mammalogy, 76: 283-301.
52. RIDDLE, B. R., D. J. HAFNER, L. F. ALEXANDER, and J. R. JAEGER. 2000a. Cryptic vicariance in the historical assembly of a Baja California Peninsular Desert biota. Proceedings of the National Academy of Sciences of the USA, 97: 14438-14443.
53. RIDDLE, B. R., D. J. HAFNER, and L. F. ALEXANDER. 2000b. Phyl ogeography and systematics of the Peromyscus eremicus species group and the historical biogeography of North America warm regional deserts. Molecular Phylogenetics and Evolution, 17: 145-160.
54. RIVERS, N. M., R. K. BUTLIN, and J. D. ALTRINGHAM. 2005. Genetic population structure of Natterer's bats explained by mating at swarming sites and philopatry. Molecular Ecology, 14: 4299-4312.
55. ROBERTS, T. E. 2006. Multiple levels of allopatric divergence in the endemic Philippine fruit bat Haplonycteris fischeri (Pte ropodidae). Biological Journal of the Linnean Society, 88: 329-349.
56. ROSENBERG, N. A. 2004. DISTRUCT: a program for the graphical display of population structure. Molecular Ecology Notes, 4: 137-138.
57. RUSSELL, A. L., R. A. MEDELLIN, and G. G. MCCRACKEN. 2005. Genetic variation and migration in the Mexican free-tailed bat (Tadarida brasiliensis mexicana). Molecular Ecology, 14: 2207-2222.
58. SCRIBNER, K. T., M. R. PETERSON, R. L. FIELDS, S. L. TALBOT, M. PEARCE, and R. K. CHESSER. 2001. Sex-biased gene flow in spectacled eiders (Anatidae): inference from molecular markers with contrasting modes of inheritance. Evolution, 55: 2105-2115.
59. SINCLAIR, E. A., N. WEBB, A. D. MARCHANT, and C. R. TIDEMANN. 1996. Genetic variation in the little red flying-fox Pteropus scapulatus (Chiroptera: Pteropodidae): implications for management. Biological Conservation, 76: 45-50.
60. VAUGHAN, T. A., and T. J. O'SHEA. 1976. Roosting ecology of the pallid bat, Antrozous pallidus. Journal of Mammalogy, 57: 19-42.
61. VOS, P., R. HOGERS, M. BLEEKER, M. REIJANS, T. VAN DE LEE, M. HORNES, A. FRIJTERS, J. POT, J. PELEMAN, M. KUIPER, and M. ZABEAU. 1995. AFLP: a new technique for DNA fingerprinting. Nucleic Acids Research, 23: 4409-4414.
62. WEBB, N. J., and C. R. TIDEMANN. 1996. Mobility of Australian flying-foxes, Pteropus spp. (Megachiroptera): evidence from genetic variation. Proceedings of the Royal Society of London, 263B: 497-502.
63. WELLS, P. V. 1977. Post-glacial origin of the present Chihu ahuan Desert less than 11,500 years ago. Pp. 67-83, in Transactions of the Symposium on the Biological Resources of the Chihuahuan Desert Region, United States and Mexico (R. W. WAUER and D. H. RISKIND, eds.). U.S. Dep art ment of the Interior, National Park Service Transactions and Proceedings Series, No. 3, 658 pp.
64. WEYANDT, S. E., and R. A. VAN DEN BUSSCHE. 2007. Phylogeographic structuring and volant mammals: the case of the pallid bat (Antrozous pallidus). Journal of Biogeography, 34: 1233-1245.
65. WILKINSON, G. S., and T. H. FLEMING. 1996. Migration and evolution of the lesser long-nosed bats Leptonycteris curasoe, inferred from mitochondrial DNA. Molecular Ecology, 5: 329-339.
66. WORTHINGTON WILMER, J., C. MORITZ, L. HALL, and J. TOOP. 1994. Extreme population structuring in the threatened ghost bat, Macroderma gigas: evidence from mitochondrial DNA. Proceedings of the Royal Society of London, 257B: 193-198.
67. ZAMUDIO, K. R., K. B. JONES, and R. H. WARD. 1997. Molecular systematics of short-horned lizards: biogeography and taxonomy of a widespread species complex. Systematic Biology, 46: 284-305.