Phylogeographic structuring and volant mammals: The case of the pallid bat (Antrozous pallidus)

Journal of Biogeography

Volumn 34, Issue 7, 2007, Pages 1233-1245

  Weyandt, Sarah E ^a,b   Van Den Bussche, Ronald A ^a  

^a OKLAHOMA STATE UNIVERSITY   (United States)

^b UNIVERSITY OF CHICAGO   (United States)

Author keywords

Antrozous pallidus; Control region; Cytochrome b; Geographic structure; Mitochondrial DNA; North America; Phylogeography; Pleistocene; Tertiary; Volant mammals

Indexed keywords

BAT; CLADISTICS; DIVERGENCE; EVOLUTION; GENETIC DIFFERENTIATION; MITOCHONDRIAL DNA; PARSIMONY ANALYSIS; PHYLOGEOGRAPHY; POLYMERASE CHAIN REACTION;

CANADA; MEXICO [NORTH AMERICA]; NORTH AMERICA; UNITED STATES;

ANTROZOUS; ANTROZOUS PALLIDUS; MAMMALIA;

EID: 34250698005     PISSN: 03050270     EISSN: 13652699     Source Type: Journal    
DOI: 10.1111/j.1365-2699.2007.01690.x     Document Type: Article

References (75)

1. Arbogast, B.S. Slowinski, J.B. (1998) Pleistocene speciation and the mitochondrial DNA clock. Science, 282, 1955.
2. Arbogast, B.S., Browne, R.A. Weigl, P.D. (2001) Evolutionary genetics and Pleistocene biogeography of North American tree squirrels (Tamiasciurus). Journal of Mammalogy, 82, 302 319.
3. Avise, J.C. (1996) Toward a regional conservation genetics perspective: phylogeography of faunas in the southeastern United States. Conservation genetics: case histories from nature (ed. by J.C. Avise J.L. Hamrick pp. 431 470. Chapman and Hall, New York.
4. Avise, J.C. (2000) Phylogeography: the history and formation of species. Harvard University Press, Cambridge, MA.
5. Axelrod, D.I. (1985) Rise of the grassland biome, Central North America. The Botanical Review, 51, 164 201.
6. Betancourt, J.L., Van Devender, T.R. Martin, P.S. (1990) Synthesis and prospectus. Packrat middens: The last 40,000 years of biotic change (ed. by J.L. Betancourt, T.R. Van Devender P.S. Martin pp. 435 447. The University of Arizona Press, Tucson.
7. Bradley, R.D. Baker, R.J. (2001) A test of the genetic species concept: cytochrome-b sequences and mammals. Journal of Mammalogy, 82, 960 973.
8. Calsbeek, R., Thompson, J.N. Richardson, J.E. (2003) Patterns of molecular evolution and diversification in a biodiversity hotspot: the California Floristic Province. Molecular Ecology, 12, 1021 1029.
9. Campbell, P., Schneider, C.J., Adnan, A.M., Zubaid, A. Kunz, T.H. (2006) Comparative population structure of Cynopterus fruit bats in peninsular Malaysia and southern Thailand. Molecular Ecology, 15, 29 47.
10. Castella, V., Ruedi, M. Excoffier, L. (2001) Contrasted patterns of mitochondrial and nuclear structure among nursery colonies of the bat Myotis myotis. Journal of Evolutionary Biology, 14, 708 720.
11. Clement, M., Posada, D. Crandall, K.A. (2000) TCS: a computer program to estimate gene genealogies. Molecular Ecology, 9, 1657 1659.
12. Crandall, K.A. Templeton, A.R. (1993) Empirical tests of some predictions from coalescent theory with applications to intraspecific phylogeny reconstruction. Genetics, 134, 959 969.
13. Crandall, K.A. Templeton, A.R. (1996) Applications of intraspecific phylogenetics. New uses for new phylogenies (ed. by P.H. Harvey, A.J. Leigh Brown, J. Maynard Smith S. Nee pp. 81 102. Oxford University Press, Oxford.
14. Czaplewski, N.J. (1993) Pizonyx wheeleri Dalquest and Patrick (Mammalia: Chiroptera) from the Miocene of Texas referred to the genus Antrozous H. Allen. Journal of Vertebrate Paleontology, 13, 378 380.
15. Dalquest, W.W. Patrick, D.B. (1989) Small mammals from the early and medial Hemphillian of Texas, with descriptions of a new bat and gopher. Journal of Vertebrate Paleontology, 9, 78 88.
16. Davis, W.B. Schmidly, D.J. (1994) The mammals of Texas. Texas Parks and Wildlife Press, Austin, TX.
17. Demboski, J.R. Cook, J.A. (2001) Phylogeography of the dusky shrew, Sorex monticolus (Insectivora, Soricidae): insight into deep and shallow history in northwestern North America. Molecular Ecology, 10, 1227 1240.
18. Demboski, J.R., Stone, K.D. Cook, J.A. (1999) Further perspectives on the Haida Gwaii Glacial Refugium. Evolution, 53, 2008 2012.
19. Ditchfield, A.D. (2000) The comparative phylogeography of Neotropical mammals: patterns of intraspecific mitochondrial DNA variation among bats contrasted to nonvolant small mammals. Molecular Ecology, 9, 1307 1318.
20. Engstrom, M.D. Wilson, D.E. (1981) Systematics of Antrozous dubiaquercus (Chiroptera: Vespertilionidae) with comments on the status of Bauerus Van Gelder. Annals of Carnegie Museum, 50, 371 383.
21. Findley, J.S. (1969) Biogeography of southwestern boreal and desert animals. University of Kansas Natural History Museum Miscellaneous Publications, 51, 113 128.
22. Grismer, L.L. (1994) The origin and evolution of the Peninsular herpetofauna of Baja California. Herpetological Natural History, 2, 51 106.
23. Hafner, D.J. Sullivan, R.M. (1995) Historical and ecological biogeography of Nearctic pikas (Lagomorpha: Ochotonidae). Journal of Mammalogy, 76, 302 321.
24. Hall, E.R. (1981) The mammals of North America, 2nd edn, Vol. 1. John Wiley and Sons, New York.
25. Heaney, L.R., Walsh, J.S., Jr. Peterson, A.T. (2005) The roles of geological history and colonization abilities in genetic differentiation between mammalian populations in the Philippine archipelago. Journal of Biogeography, 32, 229 247.
26. Hermanson, J.W. O'Shea, T.J. (1983) Antrozous pallidus. Mammalian Species, 213, 1 8.
27. Hewitt, G. (2000) The genetic legacy of the Quaternary ice ages. Nature, 405, 907 913.
28. Hillis, D.M., Moritz, C. Mable, B.K. (1996) Applications of molecular systematics: the state of the field and a look to the future. Molecular systematics (ed. by D.M. Hillis, C. Moritz B.K. Mable pp. 515 543. Sinauer, Sunderland, MA.
29. Hoofer, S.R. Van Den Bussche, R.A. (2003) Molecular phylogenetics of the chiropteran family Vespertilionidae. Acta Chiropterologica, 5 (Suppl. 1 63.
30. Hubbard, J.P. (1973) Avian evolution in the aridlands of North America. Living Bird, 12, 155 196.
31. Irwin, D.M., Kocher, T.D. Wilson, A.C. (1991) Evolution of the cytochrome b gene of mammals. Journal of Molecular Evolution, 32, 128 144.
32. King, P.B. (1977) The evolution of North America. Princeton University Press, Princeton, NJ.
33. Klicka, J. Zink, R.M. (1998) Pleistocene speciation and the mitochondrial DNA clock. Science, 282, 1955.
34. Kumar, S., Tamura, K., Jakobsen, I.B. Nei, M. (2001) MEGA2: molecular evolutionary genetics analysis software. Bioinformatics, 17, 1244 1245.
35. Lessa, E.P., Cook, J.A. Patton, J.L. (2003) Genetic footprints of demographic expansion in North America, but not Amazonia, during the Late Quaternary. Proceedings of the National Academy of Sciences USA, 100, 10331 10334.
36. Lindell, J., Mendez-de la Cruz, F.R. Murphy, R.W. (2005) Deep genealogical history without population differentiation: Discordance between mtDNA and allozyme divergence in the zebra-tailed lizard (Callisaurus draconoides). Molecular Phylogenetics and Evolution, 36, 682 694.
37. Lloyd, B.D. (2003) Intraspecific phylogeny of the New Zealand short-tailed bat, Mystacina tuberculata, inferred from multiple mitochondrial gene sequences. Systematic Biology, 52, 460 476.
38. Longmire, J.L., Maltbie, M. Baker, R.J. (1997) Use of ''lysis buffer'' in DNA isolation and its implication for museum collections. Occasional Papers of the Museum of Texas Tech University, 163, 1 3.
39. Lyons, S.K. (2003) A quantitative assessment of the range shifts of Pleistocene mammals. Journal of Mammalogy, 84, 385 402.
40. Maddison, W.P. Maddison, D.R. (2000) MacClade 4.0: Analysis of Phylogeny and Character Evolution. Sinauer, Sunderland, MA.
41. Martin, C.O. Schmidly, D.J. (1982) Taxonomic review of the pallid bat, Antrozous pallidus (Le Conte). Special Publications of the Museum of Texas Tech University, 18, 1 48.
42. Meyer, A. (1994) Shortcomings of the cytochrome b gene as a molecular marker. Trends in Ecology and Evolution, 9, 278 280.
43. Miller, G.S. (1902) Twenty new American bats. Proceedings of the National Academy of Sciences USA, 54, 389 412.
44. Miller-Butterworth, C.M., Jacobs, D.S. Harley, E.H. (2003) Strong population substructure is correlated with morphology and ecology in a migratory bat. Nature, 424, 187 191.
45. Moritz, C. (1994) Defining 'evolutionary significant units' for conservation. Trends in Ecology and Evolution, 9, 373 375.
46. Oxford Molecular Group, PLC. (1998) Assembly LIGN, version 1.0.9. Oxford Molecular Group plc, Oxford.
47. Pesole, G., Gissi, C., De Chirico, A. Saccone, C. (1999) Nucleotide substitution rate of mammalian mitochondrial genomes. Journal of Molecular Evolution, 48, 427 434.
48. Petit, E. Mayer, F. (1999) Male dispersal in the noctule bat (Nyctalus noctula): where are the limits Proceedings of the Royal Society of London Series B, Biological Sciences, 266, 1717 1722.
49. Pielou, E.C. (1991) After the Ice Age. University of Chicago Press, Chicago.
50. Posada, D. Crandall, K.A. (1998) Modeltest: testing the model of DNA substitution. Bioinformatics, 14, 817 818.
51. Potts, R. Behrensmeyer, A.K. (1992) Late Cenozoic terrestrial ecosystems. Terrestrial ecosystems through time. evolutionary paleoecology of terrestrial plants and animals (ed. by A.K. Behrensmeyer, J.D. Damuth, W.A. DiMichele, R. Potts, H.-D. Sues S.L. Wing pp. 419 541. University of Chicago Press, Chicago.
52. Riddle, B.R. (1995) Molecular biogeography in the pocket mice (Perognathus and Chaetodipus) and grasshopper mice (Onychomys): the late Cenozoic development of a North American aridlands rodent guild. Journal of Mammalogy, 76, 283 301.
53. Riddle, B.R., Hafner, D.J., Alexander, L.F. Jaeger, J.R. (2000a) Cryptic vicariance in the historical assembly of a Baja California Peninsular Desert biota. Proceedings of the National Academy of Sciences USA, 97, 14438 14443.
54. Riddle, B.R., Hafner, D.J. Alexander, L.F. (2000b) Phylogeography and systematics of the Peromyscus eremicus species group and the historical biogeography of North American warm regional deserts. Molecular Phylogenetics and Evolution, 17, 145 160.
55. Roberts, T.E. (2006) Multiple levels of allopatric divergence in the endemic Philippine fruit bat Haplonycteris fischeri (Pteropodidae). Biological Journal of the Linnaean Society, 88, 329 349.
56. Rodriguez-Robles, J.A. De Jesus-Escobar, J.M. (2000) Molecular systematics of New World gopher, bull, and pinesnakes (Pituophis: Colubridae), a transcontinental species complex. Molecular Phylogenetics and Evolution, 14, 35 50.
57. Russell, A.L., Medellín, R.A. McCracken, G.F. (2005) Genetic variation and migration in the Mexican free-tailed bat (Tadarida brasiliensis mexicana). Molecular Ecology, 14, 2207 2222.
58. Schneider, S., Roessli, D. Excoffier, L. (2000) Arlequin ver. 2.000: A software for population genetics data analysis. Genetics and Biometry Laboratory, University of Geneva, Geneva.
59. Smith, M.F. Patton, J.L. (1991) Variation in the mitochondrial cytochrome b sequences in natural populations of South American akodontine rodents (Muridae: Sigmodontinae). Molecular Biology and Evolution, 8, 85 103.
60. Swofford, D.L. (2000) Phylogenetic analysis using parsimony. Sinauer, Sunderland, MA.
61. Templeton, A.R. Georgiadis, N.J. (1996) A landscape approach to conservation genetics: conserving evolutionary processes in the African Bovidae. Conservation genetics, case histories from nature (ed. by J.C. Avise J.L. Hamrick pp. 398 430. Chapman and Hall, New York.
62. Thompson, J.D., Gibson, T.J., Plewniak, F., Jeanmougin, F. Higgins, D.G. (1997) The CLUSTAL X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Research, 25, 4876 4882.
63. Upton, D.E. Murphy, R.W. (1997) Phylogeny of the side-blotched lizards (Phrynosomatidae: Uta) based on mtDNA sequences: support for a midpeninsular seaway in Baja California. Molecular Phylogenetics and Evolution, 8, 104 113.
64. Vaughan, T.A. O'Shea, T.J. (1976) Roosting ecology of the pallid bat, Antrozous pallidus. Journal of Mammalogy, 57, 19 42.
65. Voorhies, M.R. (1990) Vertebrate paleontology of the proposed Norden Reservoir Area, Brown, Cherry, and Keya Paha counties, Nebraska. University of Nebraska, Lincoln, Division of Archeological Research Technical Report, 82-09, 1 138 + A1-A593.
66. Vrba, E.S. (1985) Environment and evolution: alternative causes of the temporal distribution of evolutionary events. South African Journal of Science, 81, 229 236.
67. Vrba, E.S., Denton, G.H. Prentice, M.L. (1989) Climatic influences on early hominid behavior. Ossa, 14, 127 156.
68. Webb, N.J. Tidemann, C.R. (1996) Mobility of Australian flying-foxes, Pteropus spp. (Megachiroptera): evidence from genetic variation. Proceedings of the Royal Society of London Series B, Biological Sciences, 262, 497 502.
69. Weyandt, S.E., Van Den Bussche, R.A., Hamilton, M.J. Leslie, D.M., Jr. (2005) Unraveling the effects of sex and dispersal: Conservation genetics of the endangered Ozark big-eared bat (Corynorhinus townsendii ingens). Journal of Mammalogy, 86, 1136 1143.
70. Wilkinson, G.S. Chapman, A.M. (1991) Length and sequence variation in evening bat d-loop mtDNA. Genetics, 128, 607 617.
71. Wilkinson, G.S. Fleming, T.H. (1996) Migration and evolution of lesser long-nosed bats Leptonycteris curasoae, inferred from mitochondrial DNA. Molecular Ecology, 5, 329 339.
72. Wolfe, J.A. (1985) Distribution of major vegetational types during the Tertiary. Geophysical Monograph, 32, 357 375.
73. Worthington Wilmer, J., Moritz, C., Hall, L. Toop, J. (1994) Extreme population structuring in the threatened ghost bat, Macroderma gigas: evidence from mitochondrial DNA. Proceedings of the Royal Society of London Series B, Biological Sciences, 257, 193 198.
74. Zamudio, K.R., Jones, K.B. Ward, R.H. (1997) Molecular systematics of short-horned lizards: biogeography and taxonomy of a widespread species complex. Systematic Biology, 46, 284 305.
75. Zink, R.M., Kessen, A.E., Line, T.V. Blackwell-Rago, R.C. (2001) Comparative phylogeography of some aridland bird species. Condor, 103, 1 10.