메뉴 건너뛰기




Volumn 5, Issue 12, 2010, Pages

Evidence for an RNA polymerization activity in axolotl and Xenopus egg extracts

Author keywords

[No Author keywords available]

Indexed keywords

ALPHA AMANITIN; DEOXYRIBONUCLEASE; RIBONUCLEASE; RNA POLYMERASE; SINGLE STRANDED DNA; SINGLE STRANDED RNA; 3' DEOXYADENOSINE 5' TRIPHOSPHATE; 3'-DEOXYADENOSINE 5'-TRIPHOSPHATE; DEOXYADENOSINE PHOSPHATE; DEOXYCYTIDINE PHOSPHATE; DNA; DNA DIRECTED RNA POLYMERASE III; RNA; RNA POLYMERASE II;

EID: 78650834572     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0014411     Document Type: Article
Times cited : (4)

References (58)
  • 1
    • 0037041395 scopus 로고    scopus 로고
    • An extensive network of coupling among gene expression machines
    • Maniatis T, Reed R (2002) An extensive network of coupling among gene expression machines. Nature 416: 499-506.
    • (2002) Nature , vol.416 , pp. 499-506
    • Maniatis, T.1    Reed, R.2
  • 2
    • 0037154982 scopus 로고    scopus 로고
    • A unified theory of gene expression
    • Orphanides G, Reinberg D (2002) A unified theory of gene expression. Cell MolLife 108: 439-451.
    • (2002) Cell MolLife , vol.108 , pp. 439-451
    • Orphanides, G.1    Reinberg, D.2
  • 4
    • 40449138572 scopus 로고    scopus 로고
    • Post-transcriptional gene expression: From genome-wide studies to principles
    • Halbeisen RE, Galgano A, Scherrer T, Gerber AP (2008) Post-transcriptional gene expression: From genome-wide studies to principles. Cell Mol Life Sci 65: 798-813.
    • (2008) Cell Mol Life Sci , vol.65 , pp. 798-813
    • Halbeisen, R.E.1    Galgano, A.2    Scherrer, T.3    Gerber, A.P.4
  • 5
    • 0033551328 scopus 로고    scopus 로고
    • Gene silencing in Neurospora crassa requires a protein homologous to RNA-dependent RNA polymerase
    • Cogoni C, Macino G (1999) Gene silencing in Neurospora crassa requires a protein homologous to RNA-dependent RNA polymerase. Nature 399: 166-169.
    • (1999) Nature , vol.399 , pp. 166-169
    • Cogoni, C.1    McIno, G.2
  • 6
    • 0033198944 scopus 로고    scopus 로고
    • RNA-triggered gene silencing
    • Fire A (1999) RNA-triggered gene silencing. TIG 15: 358-363.
    • (1999) TIG , vol.15 , pp. 358-363
    • Fire, A.1
  • 7
    • 0034716924 scopus 로고    scopus 로고
    • An RNAdependent RNA polymerase gene in Arabidopsis is required for posttranscriptional gene silencing mediated by a transgene but not by a virus
    • Dalmay T, Hamilton A, Rudd S, Angell S, Baulcombe D (2000) An RNAdependent RNA polymerase gene in Arabidopsis is required for posttranscriptional gene silencing mediated by a transgene but not by a virus. Cell 101: 543-553.
    • (2000) Cell , vol.101 , pp. 543-553
    • Dalmay, T.1    Hamilton, A.2    Rudd, S.3    Angell, S.4    Baulcombe, D.5
  • 8
    • 0035900635 scopus 로고    scopus 로고
    • A short primer on RNAi: RNA-directed RNA polymerase acts as a key catalyst
    • Nishikura K (2001) A short primer on RNAi: RNA-directed RNA polymerase acts as a key catalyst. Cell 107: 415-418.
    • (2001) Cell , vol.107 , pp. 415-418
    • Nishikura, K.1
  • 9
    • 0027323008 scopus 로고
    • RNAdirected RNA polymerase from tomato leaves: I Purification and physical properties
    • Schiebel W, Haas B, Marinkovic S, Klanner A, Sanger HL (1993a) RNAdirected RNA polymerase from tomato leaves: I Purification and physical properties. J Biol Chem 263: 11851-11857.
    • (1993) J Biol Chem , vol.263 , pp. 11851-11857
    • Schiebel, W.1    Haas, B.2    Marinkovic, S.3    Klanner, A.4    Sanger, H.L.5
  • 10
    • 0036927724 scopus 로고    scopus 로고
    • Cellular RNA-dependent RNA polymerase involved in posttranscriptional gene silencing has two distinct activity modes
    • Makeyev EV, Bamford DH (2002) Cellular RNA-dependent RNA polymerase involved in posttranscriptional gene silencing has two distinct activity modes. Mol Cell 10: 1417-1427.
    • (2002) Mol Cell , vol.10 , pp. 1417-1427
    • Makeyev, E.V.1    Bamford, D.H.2
  • 11
    • 0035859046 scopus 로고    scopus 로고
    • Gene silencing as an adaptative defence against viruses
    • Waterhouse PM, Wang MB, Lough T (2001) Gene silencing as an adaptative defence against viruses. Nature 411: 834-842.
    • (2001) Nature , vol.411 , pp. 834-842
    • Waterhouse, P.M.1    Wang, M.B.2    Lough, T.3
  • 12
    • 0033669621 scopus 로고    scopus 로고
    • Post-transcriptional gene silencing across kingdoms
    • Cogoni C, Macino G (2000) Post-transcriptional gene silencing across kingdoms. Curr Opin Genet Dev 10: 638-643.
    • (2000) Curr Opin Genet Dev , vol.10 , pp. 638-643
    • Cogoni, C.1    McIno, G.2
  • 13
    • 0033579344 scopus 로고    scopus 로고
    • Posttranscriptional gene silencing in Neurospora by a RecQ DNA helicase
    • Cogoni C, Macino G (1999) Posttranscriptional gene silencing in Neurospora by a RecQ DNA helicase. Science 286: 2342-2344.
    • (1999) Science , vol.286 , pp. 2342-2344
    • Cogoni, C.1    McIno, G.2
  • 14
    • 0034708215 scopus 로고    scopus 로고
    • EGO-1 is related to RNA-directed RNA polymerase and functions in germ-line development and RNA interference in C. elegans
    • Smardon A, Spoerke JM, Stacey SC, Klein ME, Mackin N, et al. (2000) EGO-1 is related to RNA-directed RNA polymerase and functions in germ-line development and RNA interference in C. elegans. Curr Biol 10: 169-178.
    • (2000) Curr Biol , vol.10 , pp. 169-178
    • Smardon, A.1    Spoerke, J.M.2    Stacey, S.C.3    Klein, M.E.4    McKin, N.5
  • 15
    • 0037322606 scopus 로고    scopus 로고
    • RNAi: Mammalian oocytes do it without RNA-dependent RNA polymerase
    • Stein P, Svoboda P, Anger M, Schultz RM (2003) RNAi: mammalian oocytes do it without RNA-dependent RNA polymerase. RNA 9: 187-192.
    • (2003) RNA , vol.9 , pp. 187-192
    • Stein, P.1    Svoboda, P.2    Anger, M.3    Schultz, R.M.4
  • 16
    • 0034596262 scopus 로고    scopus 로고
    • RNA interference for the organizer-specific gene Xlim-1 in Xenopus embryos
    • Nakano H, Amemiya S, Shiokawa K, Taira M (2000) RNA interference for the organizer-specific gene Xlim-1 in Xenopus embryos. Biochem Biophys Res Commun 274: 434-439.
    • (2000) Biochem Biophys Res Commun , vol.274 , pp. 434-439
    • Nakano, H.1    Amemiya, S.2    Shiokawa, K.3    Taira, M.4
  • 17
    • 0035900651 scopus 로고    scopus 로고
    • On the role of RNA amplification in dsRNA-triggered gene silencing
    • Sijen T, Fleenor J, Simmer F, Thijssen KL, Parrish S, et al. (2001) On the role of RNA amplification in dsRNA-triggered gene silencing. Cell 107: 465-476.
    • (2001) Cell , vol.107 , pp. 465-476
    • Sijen, T.1    Fleenor, J.2    Simmer, F.3    Thijssen, K.L.4    Parrish, S.5
  • 18
    • 0035798399 scopus 로고    scopus 로고
    • RNAi as random degradative PCR: SiRNA primers convert mRNA into dsRNAs that are degraded to generate new siRNAs
    • Lipardi C, Wei Q, Paterson BR (2001) RNAi as random degradative PCR: siRNA primers convert mRNA into dsRNAs that are degraded to generate new siRNAs. Cell 107: 297-307.
    • (2001) Cell , vol.107 , pp. 297-307
    • Lipardi, C.1    Wei, Q.2    Paterson, B.R.3
  • 19
    • 70349453559 scopus 로고    scopus 로고
    • Identification of an RNA-dependent RNA polymerase in Drosophila involved in RNAi and transposon suppression
    • Lipardi C, Paterson BM (2009) Identification of an RNA-dependent RNA polymerase in Drosophila involved in RNAi and transposon suppression. Proc Natl Acad Sci USA 106: 15645-15650.
    • (2009) Proc Natl Acad Sci USA , vol.106 , pp. 15645-15650
    • Lipardi, C.1    Paterson, B.M.2
  • 20
    • 70249114371 scopus 로고    scopus 로고
    • An RNA dependent RNA polymerase formed by hTERT and the RNase MRP RNA
    • Maida Y, Yasukawa M, Furuuchi M, Lassmann T, Possemato R, et al. (2009) An RNA dependent RNA polymerase formed by hTERT and the RNase MRP RNA. Nature 461: 230-235.
    • (2009) Nature , vol.461 , pp. 230-235
    • Maida, Y.1    Yasukawa, M.2    Furuuchi, M.3    Lassmann, T.4    Possemato, R.5
  • 21
    • 0031811913 scopus 로고    scopus 로고
    • Posttranscriptional control of c-myc RNA during early development analyzed in vivo with a Xenopus-axolotl heterologous system
    • Andéol Y, Lefresne J, Simard C, Séguin C, Mouton C, et al. (1998) Posttranscriptional control of c-myc RNA during early development analyzed in vivo with a Xenopus-axolotl heterologous system. Differentiation 63: 69-79.
    • (1998) Differentiation , vol.63 , pp. 69-79
    • Andéol, Y.1    Lefresne, J.2    Simard, C.3    Séguin, C.4    Mouton, C.5
  • 22
    • 0348143328 scopus 로고    scopus 로고
    • Injection of exogenous RNA in amphibian oocytes leads to RNA level fluctuations which are sensitive to cordycepin, an RNA chain elongation terminator
    • Montreau N, Vaur S, Dautry F, Andéol Y (2003) Injection of exogenous RNA in amphibian oocytes leads to RNA level fluctuations which are sensitive to cordycepin, an RNA chain elongation terminator. C R Biologies 326: 1135-1147.
    • (2003) C R Biologies , vol.326 , pp. 1135-1147
    • Montreau, N.1    Vaur, S.2    Dautry, F.3    Andéol, Y.4
  • 23
    • 2442690609 scopus 로고    scopus 로고
    • Coupled amplification and degradation of exogenous RNA injected in amphibian oocytes
    • Montreau N, Vaur S, Dautry F, Andéol Y (2004) Coupled amplification and degradation of exogenous RNA injected in amphibian oocytes. Nucleic Acids Research 32: 2957-2965.
    • (2004) Nucleic Acids Research , vol.32 , pp. 2957-2965
    • Montreau, N.1    Vaur, S.2    Dautry, F.3    Andéol, Y.4
  • 24
    • 0020417651 scopus 로고
    • DNA synthesis in a cell-free system from Xenopus eggs: Priming and elongation on single-stranded DNA in vitro
    • Méchali M, Harland RH (1982) DNA synthesis in a cell-free system from Xenopus eggs: priming and elongation on single-stranded DNA in vitro. Cell 30: 93-101.
    • (1982) Cell , vol.30 , pp. 93-101
    • Méchali, M.1    Harland, R.H.2
  • 25
    • 0025055091 scopus 로고
    • Competition between transcription complex assembly and chromatin assembly on replicating DNA
    • Almouzni G, Méchali M, Wolffe AP (1990) Competition between transcription complex assembly and chromatin assembly on replicating DNA. The EMBO J 9: 573-582.
    • (1990) The EMBO J , vol.9 , pp. 573-582
    • Almouzni, G.1    Méchali, M.2    Wolffe, A.P.3
  • 27
    • 0026266161 scopus 로고
    • Cell cycle extracts
    • Murray A (1991) "Cell cycle extracts". Methods in Cell Biol 36: 581-605.
    • (1991) Methods in Cell Biol , vol.36 , pp. 581-605
    • Murray, A.1
  • 30
    • 0031016162 scopus 로고    scopus 로고
    • Postfertilization deadenylation of mRNAs in Xenopus laevis embryos is sufficient to cause their degradation at the blastula stage
    • Audic Y, Omilli F, Osborne H (1997) Postfertilization deadenylation of mRNAs in Xenopus laevis embryos is sufficient to cause their degradation at the blastula stage. Mol Cell Biol 17: 209-218.
    • (1997) Mol Cell Biol , vol.17 , pp. 209-218
    • Audic, Y.1    Omilli, F.2    Osborne, H.3
  • 31
    • 0023000891 scopus 로고
    • Expression of the c-myc protooncogene during development of Xenopus laevis
    • King MW, Roberts JM, Eisenman RN (1986) Expression of the c-myc protooncogene during development of Xenopus laevis. Mol Cell Biol 6: 4499-4508.
    • (1986) Mol Cell Biol , vol.6 , pp. 4499-4508
    • King, M.W.1    Roberts, J.M.2    Eisenman, R.N.3
  • 33
    • 0019023345 scopus 로고
    • Purification of mouse immunoglobulin heavychain messenger RNAs from total myeloma tumor RNA
    • Auffray C, Rougeon F (1980) Purification of mouse immunoglobulin heavychain messenger RNAs from total myeloma tumor RNA. Eur J Biochem 107: 303-314.
    • (1980) Eur J Biochem , vol.107 , pp. 303-314
    • Auffray, C.1    Rougeon, F.2
  • 34
  • 35
    • 0022981734 scopus 로고
    • Initiation of DNA replication in nuclei and purified DNA by a cell-free extract of Xenopus eggs
    • Blow JJ, Laskey RA (1986) Initiation of DNA replication in nuclei and purified DNA by a cell-free extract of Xenopus eggs. Cell 47: 577-587.
    • (1986) Cell , vol.47 , pp. 577-587
    • Blow, J.J.1    Laskey, R.A.2
  • 36
    • 0016412414 scopus 로고
    • Eukaryotic nuclear RNA polymerases
    • Chambon P (1975) Eukaryotic nuclear RNA polymerases. Ann Rev Biochem 44: 613-638.
    • (1975) Ann Rev Biochem , vol.44 , pp. 613-638
    • Chambon, P.1
  • 37
    • 0344198460 scopus 로고    scopus 로고
    • Perpetuating the double helix molecular machines at eukaryotic DNA replication origin
    • Mendez J, Stillman B (2003) Perpetuating the double helix molecular machines at eukaryotic DNA replication origin. Bioassays 25: 1158-1167.
    • (2003) Bioassays , vol.25 , pp. 1158-1167
    • Mendez, J.1    Stillman, B.2
  • 38
    • 0034058071 scopus 로고    scopus 로고
    • Activation of Wee1 by p42 MAPK in vitro and in cycling xenopus egg extracts
    • Walter SA, Guadagno SN, Ferrell JE, Jr. (2000) Activation of Wee1 by p42 MAPK in vitro and in cycling xenopus egg extracts. Mol Biol Cell 11: 887-896.
    • (2000) Mol Biol Cell , vol.11 , pp. 887-896
    • Walter, S.A.1    Guadagno, S.N.2    Ferrell Jr., J.E.3
  • 39
    • 1542357308 scopus 로고    scopus 로고
    • Activation of Cdc2 kinase during meiotic maturation of axolotl oocyte
    • Vaur S, Poulhe R, Maton G, Andeol Y, Jessus C (2004) Activation of Cdc2 kinase during meiotic maturation of axolotl oocyte. Dev Biol 267: 265-278.
    • (2004) Dev Biol , vol.267 , pp. 265-278
    • Vaur, S.1    Poulhe, R.2    Maton, G.3    Andeol, Y.4    Jessus, C.5
  • 40
    • 34249804526 scopus 로고    scopus 로고
    • Characterization and expression of a maternal axolotl Cyclin B1 during oogenesis and early development
    • Pelczar H, Caulet S, Thibier C, Poulhe R, Valianou I, et al. (2007) Characterization and expression of a maternal axolotl Cyclin B1 during oogenesis and early development. Develop Growth and Diff 49: 407-419.
    • (2007) Develop Growth and Diff , vol.49 , pp. 407-419
    • Pelczar, H.1    Caulet, S.2    Thibier, C.3    Poulhe, R.4    Valianou, I.5
  • 41
    • 0023148736 scopus 로고
    • Transcription of adenovirus 2 major late and peptide IX genes under conditions of in vitro nucleosome assembly
    • Matsui T (1987) Transcription of adenovirus 2 major late and peptide IX genes under conditions of in vitro nucleosome assembly. Mol Cell Biol 7: 1401-1408.
    • (1987) Mol Cell Biol , vol.7 , pp. 1401-1408
    • Matsui, T.1
  • 42
    • 0023661185 scopus 로고
    • Binding of transcription factor TFDII to the major late promoter during in vitro nucleosome assembly potentiates subsequent initiation by RNA polymerase II
    • Workman JL, Roeder RG (1987) Binding of transcription factor TFDII to the major late promoter during in vitro nucleosome assembly potentiates subsequent initiation by RNA polymerase II. Cell 51: 613-622.
    • (1987) Cell , vol.51 , pp. 613-622
    • Workman, J.L.1    Roeder, R.G.2
  • 43
    • 0023644244 scopus 로고
    • Differential 5S RNA gene expression in vitro
    • Wolffe AP, Brown DD (1987) Differential 5S RNA gene expression in vitro. Cell 355: 733-740.
    • (1987) Cell , vol.355 , pp. 733-740
    • Wolffe, A.P.1    Brown, D.D.2
  • 44
    • 0026599021 scopus 로고
    • Chromatin as an essential part of the transcriptional mechanism
    • Fesenfeld G (1992) Chromatin as an essential part of the transcriptional mechanism. Nature 355: 219-224.
    • (1992) Nature , vol.355 , pp. 219-224
    • Fesenfeld, G.1
  • 45
    • 0028269401 scopus 로고
    • Competition between chromatin and transcription complex assembly regulates gene expression during early development
    • Prioleau MN, Huet J, Sentenac A, Méchali M (1994) Competition between chromatin and transcription complex assembly regulates gene expression during early development. Cell 77: 439-449.
    • (1994) Cell , vol.77 , pp. 439-449
    • Prioleau, M.N.1    Huet, J.2    Sentenac, A.3    Méchali, M.4
  • 46
    • 0001317168 scopus 로고
    • Polynucleotide biosynthesis: Formation of a sequence of adenylate units from adenosine triphosphate by an enzyme from thymus nuclei
    • Edmonds M, Abrams R (1960) Polynucleotide biosynthesis: formation of a sequence of adenylate units from adenosine triphosphate by an enzyme from thymus nuclei. J Biol Chem 235: 1142-1149.
    • (1960) J Biol Chem , vol.235 , pp. 1142-1149
    • Edmonds, M.1    Abrams, R.2
  • 47
    • 0029258674 scopus 로고
    • Poly(A) polymerase in the nucleus and the cytoplasm of frog oocytes: Dynamic changes during oocyte maturation and early development
    • Ballantyne S, Bilger A, Astrom J, Virtanen A, Wickens M (1995) Poly(A) polymerase in the nucleus and the cytoplasm of frog oocytes: Dynamic changes during oocyte maturation and early development. RNA 1: 64-78.
    • (1995) RNA , vol.1 , pp. 64-78
    • Ballantyne, S.1    Bilger, A.2    Astrom, J.3    Virtanen, A.4    Wickens, M.5
  • 49
    • 35548959608 scopus 로고    scopus 로고
    • RNA-specific ribonucleotidyl transferases
    • Martin G, Keller W (2007) RNA-specific ribonucleotidyl transferases. RNA 13: 1834-1849.
    • (2007) RNA , vol.13 , pp. 1834-1849
    • Martin, G.1    Keller, W.2
  • 50
    • 0033793081 scopus 로고    scopus 로고
    • RNA interference: Genetic wand and genetic watchdog
    • Bosher JM (2000) RNA interference: genetic wand and genetic watchdog. Nat Cell Biol 2: 31-36.
    • (2000) Nat Cell Biol , vol.2 , pp. 31-36
    • Bosher, J.M.1
  • 51
    • 38349133687 scopus 로고    scopus 로고
    • Transcription of Hepatitis Delta Virus RNA by RNA polymerase II
    • Chang J, Nie X, Chang HE, Han Z, Taylor J (2008) Transcription of Hepatitis Delta Virus RNA by RNA polymerase II. J Virology 82: 1118-1127.
    • (2008) J Virology , vol.82 , pp. 1118-1127
    • Chang, J.1    Nie, X.2    Chang, H.E.3    Han, Z.4    Taylor, J.5
  • 52
    • 0033859778 scopus 로고    scopus 로고
    • RNAdependent replication and transcription of Hepatitis Delta virus RNA involve distinct cellular RNA polymerases
    • Modahl LE, Macnaughton TB, Zhu N, Johnson DL, Lai MMC (2000) RNAdependent replication and transcription of Hepatitis Delta virus RNA involve distinct cellular RNA polymerases. Mol Cell Biol 20: 6030-6039.
    • (2000) Mol Cell Biol , vol.20 , pp. 6030-6039
    • Modahl, L.E.1    McNaughton, T.B.2    Zhu, N.3    Johnson, D.L.4    Lai, M.M.C.5
  • 53
    • 20744457353 scopus 로고    scopus 로고
    • RNA replication without RNA-dependent RNA polymerase: Surprises from Hepatitis Delta virus
    • Lai MMC (2005) RNA replication without RNA-dependent RNA polymerase: Surprises from Hepatitis Delta virus. J Virology 79: 7951-7958.
    • (2005) J Virology , vol.79 , pp. 7951-7958
    • Lai, M.M.C.1
  • 54
    • 0034795887 scopus 로고    scopus 로고
    • Host RNA polymerase requirements for transcription of the human Hepatitis Delta virus genome
    • Moraleda G, Taylor J (2001) Host RNA polymerase requirements for transcription of the human Hepatitis Delta virus genome. J Virology 75: 10161-10169.
    • (2001) J Virology , vol.75 , pp. 10161-10169
    • Moraleda, G.1    Taylor, J.2
  • 55
    • 36249026527 scopus 로고    scopus 로고
    • Molecular basis of RNA-dependent RNA polymerase II activity
    • Lehmann E, Brueckner F, Cramer P (2007) Molecular basis of RNA-dependent RNA polymerase II activity. Nature 450: 445-449.
    • (2007) Nature , vol.450 , pp. 445-449
    • Lehmann, E.1    Brueckner, F.2    Cramer, P.3
  • 56
    • 0029155434 scopus 로고
    • Complete replication of poliovirus in vitro: Preinitiation RNA replication complexes require soluble cellular factors for the synthesis of VPg-linked RNA
    • Barton DJ, Black EP, Flanegan JB (1995) Complete replication of poliovirus in vitro: preinitiation RNA replication complexes require soluble cellular factors for the synthesis of VPg-linked RNA. J Virology 69: 5516-5527.
    • (1995) J Virology , vol.69 , pp. 5516-5527
    • Barton, D.J.1    Black, E.P.2    Flanegan, J.B.3
  • 57
    • 0023376463 scopus 로고
    • Synthesis of globin RNA in enucleated differentiating murine erythroleukemia cells
    • Volloch V, Schweitzer B, Rits S (1987) Synthesis of globin RNA in enucleated differentiating murine erythroleukemia cells. J Cell Biol 105: 137-143.
    • (1987) J Cell Biol , vol.105 , pp. 137-143
    • Volloch, V.1    Schweitzer, B.2    Rits, S.3
  • 58
    • 0029978049 scopus 로고    scopus 로고
    • Antisense globin RNA in mouse erythroid tissues: Structure, origin, and possible function
    • Volloch V, Schweitzer B, Rits S (1996) Antisense globin RNA in mouse erythroid tissues: structure, origin, and possible function. Proc Natl Acad Sci U S A 93: 2476-2481.
    • (1996) Proc Natl Acad Sci U S A , vol.93 , pp. 2476-2481
    • Volloch, V.1    Schweitzer, B.2    Rits, S.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.