Evaluation of fiber bundles across subjects through brain mapping and registration of diffusion tensor data

NeuroImage

Volumn 54, Issue SUPPL. 1, 2011, Pages

  Pai, Darshan ^a   Soltanian Zadeh, Hamid ^b,c   Hua, Jing ^a  

^a Wayne State University   (United States)

^b HENRY FORD HEALTH SYSTEM   (United States)

^c UNIVERSITY OF TEHRAN   (Iran)

Author keywords

Analysis of fiber bundles; Diffusion imaging; Epilepsy; Medical image processing; Multimodality fusion; Shape analysis

Indexed keywords

ACCURACY; ADULT; ANISOTROPY; ARTICLE; BRAIN ATROPHY; BRAIN FORNIX; BRAIN MAPPING; BRAIN SIZE; CINGULATE GYRUS; CLINICAL ARTICLE; CONTROLLED STUDY; DIFFUSION TENSOR IMAGING; FEMALE; HUMAN; IMAGE ANALYSIS; INTERRATER RELIABILITY; MALE; MATHEMATICAL ANALYSIS; NERVE FIBER; NORMAL DISTRIBUTION; NUCLEAR MAGNETIC RESONANCE IMAGING; PRIORITY JOURNAL; PROBABILITY; TEMPORAL LOBE EPILEPSY; VOLUMETRY; WHITE MATTER;

ADULT; ANISOTROPY; BRAIN; BRAIN MAPPING; DIFFUSION TENSOR IMAGING; EPILEPSY, TEMPORAL LOBE; FEMALE; HUMANS; IMAGE INTERPRETATION, COMPUTER-ASSISTED; MALE; NEURAL PATHWAYS;

EID: 78650820358     PISSN: 10538119     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.neuroimage.2010.05.085     Document Type: Article

References (49)

1. Alexander D., Pierpaoli C., Basser N., Gee J. Spatial transformations of diffusion tensor magnetic resonance images. IEEE Trans. Med. Imaging 2001, 20:1131-1139.
2. Arfanakis K., Hermann B.P., Rogers B.P., Carew J.D., Seidenberg M., Meyerand M.E. Diffusion tensor MRI in temporal lobe epilepsy. Magn. Reson. Imaging 2002, 20(7):511-519.
3. Arsigny V., Fillard P., Pennec X., Ayache N. Log-Euclidean metrics for fast and simple calculus on diffusion tensors. Magn. Reson. Med. 2006, 56(2):411-421.
4. Assaf B.A., Mohamed F.B., Abou-Khaled K.J., Williams J.M., Yazeji M.S., Haselgrove J., et al. Diffusion tensor imaging of the hippocampal formation in temporal lobe epilepsy. Am. J. Neuroradiol. 2003, 24(9):1857-1862.
5. Brehens T., Woolrich M., Jenkinson M.R., Numes H.J.-B., Clare S., Matthews P., Brady J., Smith S. Characterization and propagation of uncertainty in diffusion-weighted MR imaging. Magn. Reson. Med. 2003, 50(5):1077-1088.
6. Camion V., Younes L. Geodesic interpolating splines. Proceedings of the Third International Workshop on Energy Minimization Methods in Computer Vision and Pattern Recognition 2001.
7. Carmo M.D. Differential Geometry of Curves and Surfaces 1976, Prentice Hall, New York, NY, USA.
8. Chua C.S., Jarvis R. Point signatures: a new representation for 3d object recognition. Int. J. Comput. Vis. 1997, 25(1):63-85.
9. Concha L., Beaulieu C., Gross D.W. Bilateral limbic diffusion abnormalities in unilateral temporal lobe epilepsy. Ann. Neurol. 2005, 57(2):188-196.
10. Drury H. Surface-based Analyses of the Human Cerebral Cortex, Brain Warping 1999, 337-363. Elsevier.
11. Essen D.V., Drury H.A., Dickson J., Harwell J., Hanlon D., Anderson C.H. An integrated software system for surface-based analyses of cerebral cortex. J. Am. Med. Inform. Assoc. 2001, 8:443-459.
12. Fischl B., Sereno M.I., Dale A.M. Cortical surface-based analysis. II: Inflation, flattening, and a surface-based coordinate system. Neuroimage 1999, 9:195-207.
13. Frank L. Anisotropy in high angular resolution diffusion-weighted MRI. Magn. Reson. Med. 2001, 45:935-939.
14. Friman O., Farneback G., Westin C.-F. A Bayesian approach for stochastic white matter tractography. IEEE Trans. Med. Imaging 2006, 25(8):965-978.
15. Friston K.J., Holmes A.P., Worsley K.J., Poline J.-P., Frith C.D., Frackowiak R.S.J. Statistical parametric maps in functional imaging: a general linear approach. Hum. Brain Mapp. 1994, 2(4):189-210.
16. Gaolang G., Concha L., Beaulieu C., Gross D. Thalamic diffusion and volumetry in temporal lobe epilepsy with and without mesial temporal sclerosis. Epilepsy Res. 2008, 80:184-193.
17. Gu X., Wang Y., Chan T., Thompson P., Yau S.-T. Genus zero surface conformal mapping and its application to brain surface mapping. IEEE Trans. Med. Imaging 2004, 23(8):949-958.
18. Hagmann P. Diffusion spectrum imaging tractography in complex cerebral white matter: an investigation of the centrum semiovale. ISMRM 2004, 632.
19. Jones D.K., Griffin L.D., Alexander D.C., Catani M., Horsfield M.A., Howard R., Williams S.C. Spatial normalization and averaging of diffusion tensor MRI data sets. Neuroimage 2002, 17(2):592-617.
20. Kazhdan M., Funkhouser T., Rusinkiewicz S. Rotation invariant spherical harmonic representation of 3D shape descriptors. Symp. Geom. Process. 2003, 156-165.
21. Kindlmann G., Ennis D.B., Whitaker R.T., Westin C.-F. Diffusion tensor analysis with invariant gradients and rotation tangents. IEEE Trans. Med. Imaging 2007, 26(11):1483-1499.
22. Kindlmann, G., Jośe, S., Niethammer, M., Haker, S., Westin, C.-F., 2007b. Geodesic-loxodromes for diffusion tensor interpolation and difference measurement. pp. 1-9. URL http://dx.doi.org/10.1007/978-3-540-75757-31.
23. Melonakas J., Kubicki M., Niethammer M., Miller J., Tannenbaum A. Locally-constrained region-based methods for DW-MRI segmentation. ICCV 2007, 1-8.
24. Miller M., Banerjee A., Christensen G., Joshi S., Khaneja N., Grenander U., Matejic L. Statistical methods in computational neuroanatomy. Stat. Meth. Med. Res. 1997, 6(3):267-299.
25. Mori S., Crain B.J., Chacko V.P., Zijl P.C. Three-dimensional tracking of axonal projections in the brain by magnetic resonance imaging. Ann. Neurol. 1999, 45(2):265-269.
26. Muzik O., Chugani D., Juhasz C., Shen C., Chugani H. Statistical parametric mapping: assessment of application in children. Neuroimage 2000, 12:538-549.
27. Muzik O., Chugani D.C., Zou G., Hua J., Lu Y., Lu S., Asano E., Chugani H.T. Multimodality data integration in epilepsy. Int. J. Biomed. Imaging PMCID: PMC1940316 2007.
28. Osada R., Funkhouser T., Chazzele B., Dobkin D. Shape distributions. Transaction Graph. 2002, 21(4):807-832.
29. Pajevic S., Aldroubi A., Basser P. A continuous tensor field approximation of discrete DT-MRI data for extracting microstructural and architectural features of tissue. J. Magn. Reson. 2002, 154:85-100.
30. Pantazis D., Joshi A., Jintao J., Shattuck D., Bernstein L., Damasio H., Leahy R. Comparison of landmark-based and automatic methods for cortical surface registration. Neuroimage 2010, 49(3):2479-2493.
31. Park H., Kubicki M., Shenton M.E., Guimond A., McCarley R.W., Maier S.E., Kikinis R., Jolesz F.A., Westin C.-F. Spatial normalization of diffusion tensor MRI using multiple channels. Neuroimage 2003, 20:1995-2009.
32. Parker G. Tracing fiber tracts using fast marching. Proc., Int. Soc. Magn. Reson. 2000, 8:85.
33. Pennec X., Fillard P., Ayache N. A reimannian framework for tensor computing. Int. J. Comput. Vis. 2006, 66:41-66.
34. Schultz T., Seidel H.-P. Using eigenvalue derivatives for edge detection in DT-MRI data. DAGM Symposium 2008, 193-202.
35. Smith S., Jenkinson M., Johansen-Berg H., Rueckert D., Nichols T., Mackay C., Watkins K., Ciccarelli O., Cader M., Matthews P., Brehens T. Tract-based spatial statistics: voxelwise analysis of multi-subject diffusion data. Neuroimage 2006, 31:1487-1505.
36. Stejskal E., Tanner J. Spin diffusion measurements: spin echoes in the presence of a time-dependent field gradient. J. Chem. Phys. 1965, 42:184-195.
37. Styner M., Gerig G. Three-dimensional medial shape representation incorporating object variability. Comput. Vis. Pattern Recognit. 2001, 2:651-656.
38. Styner M., Gerig G., Lieberman J., Jones D., Weinberger D. Statistical shape analysis of neuroanatomic structures based on medial models. Med. Image Anal. 2003, 7:207-220.
39. Thompson P., Toga A. A framework for computational anatomy. Comput. Vis. Sci. 2002, 5:13-34.
40. Thompson P., Vidal C., Giedd J.N., Gochman P., Blumenthal J., Nicolson R., Toga A.W., Rapoport J.L. Mapping adolescent brain change reveals dynamic wave of accelerated gray matter loss in very early-onset schizophrenia. Proc. Natl Acad. Sci. USA 2001, 98(20):11650-11655.
41. Vemuri B., Mitiche A., Aggarwal J. Curvature-based representation of objects from range data. Image Vis. Comput. 1986, 4(2):107-114.
42. Wakana S., Jiang H., Nagae-Poetscher L., Zijl P., Mori S. Fiber tract based atlas of human white matter anatomy. Radiology 2004, 230:77-87.
43. Wang Y., Gu X., Chan T.F., Thompson P.M., Tung Yau S. Volumetric harmonic brain mapping. IEEE Int. Symp. Biomed. Imaging 2004, 1275-1278.
44. Wang Y., Lui L., Chan T., Thompson P. Optimization of brain conformal mapping with landmarks. Proc. MICCAI 2005, 675-683.
45. Wieshmann U.C., Clark C.A., Symms M.R., Barker G.J., Birnie K.D., Shorvon S.D. Water diffusion in the human hippocampus in epilepsy. Magn. Reson. Imaging 1999, 17:29-36.
46. Woods R.P., Grafton S.T., Holmes C.J., Cherry S.R., Mazziotta J.C. Automated image registration. I. General methods and intrasubject, intramodality validation. J. Comput. Assist. Tomogr. 1998, 22:139-152.
47. Yoo S.Y., Chang K.H., Song I.C., Han M.H., Kwon B.J., Lee S.H., et al. Apparent diffusion coefficient value of the hippocampus in patients with hippocampal sclerosis and in healthy volunteers. Am. J. Neuroradiol. 2002, 23(5):809-812.
48. Zhang D. Harmonic Shape Images: a 3D Free-form Surface Representation and its Applications in Surface Matching 1999, Ph.D. Dissertation, Robotics Institute, Carnegie Mellon University.
49. Zou G., Hua J., Gu X. An approach for intersubject analysis of 3D brain images based on conformal geometry. Proceedings, ICIP 2006, 1193-1196.