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Volumn 20, Issue 4, 2010, Pages

Cell differentiation modeled via a coupled two-switch regulatory network

Author keywords

[No Author keywords available]

Indexed keywords

ANIMAL; ARTICLE; BIOLOGICAL MODEL; CARTILAGE CELL; CELL DIFFERENTIATION; CYTOLOGY; GENE REGULATORY NETWORK; GENETICS; METABOLISM; OSTEOBLAST; REGULATOR GENE;

EID: 78650708099     PISSN: 10541500     EISSN: None     Source Type: Journal    
DOI: 10.1063/1.3505000     Document Type: Article
Times cited : (19)

References (28)
  • 1
    • 34248199004 scopus 로고    scopus 로고
    • Bifurcation dynamics in lineage-commitment in bipotent progenitor cells
    • DEBIAO, 0012-1606, 10.1016/j.ydbio.2007.02.036
    • Huang S. Guo Y.-P. May G. Enver T. Bifurcation dynamics in lineage-commitment in bipotent progenitor cells. Dev. Biol. 2007, 305:695. DEBIAO, 0012-1606, 10.1016/j.ydbio.2007.02.036.
    • (2007) Dev. Biol. , vol.305 , pp. 695
    • Huang, S.1    Guo, Y.-P.2    May, G.3    Enver, T.4
  • 2
    • 33746040437 scopus 로고    scopus 로고
    • Towards an understanding of lineage specification in hematopoietic stem cells: A mathematical model for the interaction of transcription factors GATA-1 and PU.1
    • JTBIAP, 0022-5193
    • Roeder I. Glauche I. Towards an understanding of lineage specification in hematopoietic stem cells: A mathematical model for the interaction of transcription factors GATA-1 and PU.1. J. Theor. Biol. 2006, 241:852. JTBIAP, 0022-5193.
    • (2006) J. Theor. Biol. , vol.241 , pp. 852
    • Roeder, I.1    Glauche, I.2
  • 3
    • 70349684846 scopus 로고    scopus 로고
    • Integrating extrinsic and intrinsic cues into a minimal model of lineage commitment for hematopoietic progenitors
    • ZZZZZZ, 1553-734X, 10.1371/journal.pcbi.1000518
    • Palani S. Sarkar C.A. Integrating extrinsic and intrinsic cues into a minimal model of lineage commitment for hematopoietic progenitors. PLOS Comput. Biol. 2009, 5:e1000518. ZZZZZZ, 1553-734X, 10.1371/journal.pcbi.1000518.
    • (2009) PLOS Comput. Biol. , vol.5
    • Palani, S.1    Sarkar, C.A.2
  • 4
    • 59149091124 scopus 로고    scopus 로고
    • Computational modeling of the hematopoietic erythroid-myeloid switch reveals insights into cooperativity, priming, and irreversibility
    • ZZZZZZ, 1553-734X, 10.1371/journal.pcbi.1000268
    • Chickarmane V. Enver T. Peterson C. Computational modeling of the hematopoietic erythroid-myeloid switch reveals insights into cooperativity, priming, and irreversibility. PLOS Comput. Biol. 2009, 5:e1000268. ZZZZZZ, 1553-734X, 10.1371/journal.pcbi.1000268.
    • (2009) PLOS Comput. Biol. , vol.5
    • Chickarmane, V.1    Enver, T.2    Peterson, C.3
  • 5
    • 70049108481 scopus 로고    scopus 로고
    • A model of sequential branching in hierarchical cell fate determination
    • JTBIAP, 0022-5193, 10.1016/j.jtbi.2009.07.005
    • Foster D.V. Foster J.G. Huang S. Kauffman S.A. A model of sequential branching in hierarchical cell fate determination. J. Theor. Biol. 2009, 260:589. JTBIAP, 0022-5193, 10.1016/j.jtbi.2009.07.005.
    • (2009) J. Theor. Biol. , vol.260 , pp. 589
    • Foster, D.V.1    Foster, J.G.2    Huang, S.3    Kauffman, S.A.4
  • 6
    • 11844273196 scopus 로고    scopus 로고
    • High-dimensional switches and the modelling of cellular differentiation
    • JTBIAP, 0022-5193, 10.1016/j.jtbi.2004.10.027
    • Cinquin O. Demongeot J. High-dimensional switches and the modelling of cellular differentiation. J. Theor. Biol. 2005, 233:391. JTBIAP, 0022-5193, 10.1016/j.jtbi.2004.10.027.
    • (2005) J. Theor. Biol. , vol.233 , pp. 391
    • Cinquin, O.1    Demongeot, J.2
  • 7
    • 52649162487 scopus 로고    scopus 로고
    • Stochasticity and the molecular mechanisms of induced pluripotency
    • ZZZZZZ, 1932-6203, 10.1371/journal.pone.0003086
    • MacArthur B.D. Please C.P. Oreffo R.O. C. Stochasticity and the molecular mechanisms of induced pluripotency. PLoS ONE 2008, 3:e3086. ZZZZZZ, 1932-6203, 10.1371/journal.pone.0003086.
    • (2008) PLoS ONE , vol.3
    • MacArthur, B.D.1    Please, C.P.2    Oreffo, R.O.C.3
  • 8
    • 20444429578 scopus 로고    scopus 로고
    • Adult mesenchymal stem cells: Characterization, differentiation, and application in cell and gene therapy
    • 10.1111/j.1582-4934.2004.tb00320.x, 1582-1838
    • Baksh D. Song L. Tuan R.S. Adult mesenchymal stem cells: Characterization, differentiation, and application in cell and gene therapy. J. Cell. Mol. Med. 2004, 8:301. 10.1111/j.1582-4934.2004.tb00320.x, 1582-1838.
    • (2004) J. Cell. Mol. Med. , vol.8 , pp. 301
    • Baksh, D.1    Song, L.2    Tuan, R.S.3
  • 9
    • 0034688174 scopus 로고    scopus 로고
    • Construction of a genetic toggle switch in Escherichia coli
    • NATUAS, 0028-0836, 10.1038/35002131
    • Gardner T.S. Cantor C.R. Collins J.J. Construction of a genetic toggle switch in Escherichia coli. Nature (London) 2000, 403:339. NATUAS, 0028-0836, 10.1038/35002131.
    • (2000) Nature (London) , vol.403 , pp. 339
    • Gardner, T.S.1    Cantor, C.R.2    Collins, J.J.3
  • 10
    • 77955288571 scopus 로고    scopus 로고
    • Nanog variability and pluripotency regulation of embryonic stem cells-insights from a mathematical model analysis
    • ZZZZZZ, 1932-6203, 10.1371/journal.pone.0011238
    • Glauche I. Herberg M. Roeder I. Nanog variability and pluripotency regulation of embryonic stem cells-insights from a mathematical model analysis. PLoS ONE 2010, 5:e11238. ZZZZZZ, 1932-6203, 10.1371/journal.pone.0011238.
    • (2010) PLoS ONE , vol.5
    • Glauche, I.1    Herberg, M.2    Roeder, I.3
  • 12
    • 47749102180 scopus 로고    scopus 로고
    • Differentiation of osteoblasts and osteocytes from mesenchymal stem cells
    • 10.2174/157488808784223032, 1574-888X
    • Heino T.J. Hentunen T.A. Differentiation of osteoblasts and osteocytes from mesenchymal stem cells. Curr. Stem Cell Res. Ther. 2008, 3:131. 10.2174/157488808784223032, 1574-888X.
    • (2008) Curr. Stem Cell Res. Ther. , vol.3 , pp. 131
    • Heino, T.J.1    Hentunen, T.A.2
  • 13
    • 32044447008 scopus 로고    scopus 로고
    • Critical molecular switches involved in BMP-2-induced osteogenic differentiation of mesenchymal cells
    • GENED6, 0378-1119, 10.1016/j.gene.2005.10.011
    • Ryoo H.-M. Lee M.-H. Kim Y.-J. Critical molecular switches involved in BMP-2-induced osteogenic differentiation of mesenchymal cells. Gene 2006, 366:51. GENED6, 0378-1119, 10.1016/j.gene.2005.10.011.
    • (2006) Gene , vol.366 , pp. 51
    • Ryoo, H.-M.1    Lee, M.-H.2    Kim, Y.-J.3
  • 14
    • 0042204967 scopus 로고    scopus 로고
    • Transcriptional mechanisms in osteoblast differentiation and bone formation
    • TRGEE2, 0168-9525, 10.1016/S0168-9525(03)00176-8
    • Nakashima K. de Crombrugghe B. Transcriptional mechanisms in osteoblast differentiation and bone formation. Trends Genet. 2003, 19:458. TRGEE2, 0168-9525, 10.1016/S0168-9525(03)00176-8.
    • (2003) Trends Genet. , vol.19 , pp. 458
    • Nakashima, K.1    de Crombrugghe, B.2
  • 15
    • 33645351946 scopus 로고    scopus 로고
    • BMP signaling is required for RUNX2-dependent induction of the osteoblast phenotype
    • JBMREJ, 0884-0431, 10.1359/jbmr.060109
    • Phimphilai M. Zhao Z. Boules H. Roca H. Franceschi R.T. BMP signaling is required for RUNX2-dependent induction of the osteoblast phenotype. J. Bone Miner. Res. 2006, 21:637. JBMREJ, 0884-0431, 10.1359/jbmr.060109.
    • (2006) J. Bone Miner. Res. , vol.21 , pp. 637
    • Phimphilai, M.1    Zhao, Z.2    Boules, H.3    Roca, H.4    Franceschi, R.T.5
  • 17
    • 67651207668 scopus 로고    scopus 로고
    • The transcriptional activity of Sox9 in chondrocytes is regulated by RhoA signaling and actin polimerization
    • MCEBD4, 0270-7306, 10.1128/MCB.01779-08
    • Kumar D. Lassar A.B. The transcriptional activity of Sox9 in chondrocytes is regulated by RhoA signaling and actin polimerization. Mol. Cell. Biol. 2009, 29:4262. MCEBD4, 0270-7306, 10.1128/MCB.01779-08.
    • (2009) Mol. Cell. Biol. , vol.29 , pp. 4262
    • Kumar, D.1    Lassar, A.B.2
  • 20
    • 68949163965 scopus 로고    scopus 로고
    • Pro-inflammatory cytokines TNF-related weak inducer of apoptosis (TWEAK) and TNFα induce the mitogen-activated protein kinase (MAPK)-dependent expression of sclerostin in human osteoblasts
    • JBMREJ, 0884-0431, 10.1359/jbmr.090305
    • Vincent C. Findlay D.M. Welldon K.J. Wijenayaka A.R. Zheng T.S. Haynes D.R. Fazzalari N.L. Evdokiou A. Atkins G.J. Pro-inflammatory cytokines TNF-related weak inducer of apoptosis (TWEAK) and TNFα induce the mitogen-activated protein kinase (MAPK)-dependent expression of sclerostin in human osteoblasts. J. Bone Miner. Res. 2009, 24:1434. JBMREJ, 0884-0431, 10.1359/jbmr.090305.
    • (2009) J. Bone Miner. Res. , vol.24 , pp. 1434
    • Vincent, C.1    Findlay, D.M.2    Welldon, K.J.3    Wijenayaka, A.R.4    Zheng, T.S.5    Haynes, D.R.6    Fazzalari, N.L.7    Evdokiou, A.8    Atkins, G.J.9
  • 21
    • 76749101087 scopus 로고    scopus 로고
    • The effects of Tweak, Fn14, and TGF-beta1 on degeneration of human intervertebral disc
    • Huh H. Lee Y.-J. Kim J.-H. Kong M.-H. Song K.-Y. Choi G. The effects of Tweak, Fn14, and TGF-beta1 on degeneration of human intervertebral disc. J. Kor. Neuro. Soc. 2010, 47:30. and.
    • (2010) J. Kor. Neuro. Soc. , vol.47 , pp. 30
    • Huh, H.1    Lee, Y.-J.2    Kim, J.-H.3    Kong, M.-H.4    Song, K.-Y.5    Choi, G.6
  • 22
    • 8744230577 scopus 로고    scopus 로고
    • MATCONT: A MATLAB package for numerical bifurcation analysis of ODEs
    • ACMSCU, 0098-3500, 10.1145/779359.779362
    • Dhooge A. Govaerts W. Kuznetsov Y.A. MATCONT: A MATLAB package for numerical bifurcation analysis of ODEs. ACM Trans. Math. Softw. 2003, 29:141. ACMSCU, 0098-3500, 10.1145/779359.779362.
    • (2003) ACM Trans. Math. Softw. , vol.29 , pp. 141
    • Dhooge, A.1    Govaerts, W.2    Kuznetsov, Y.A.3
  • 23
    • 12244296438 scopus 로고    scopus 로고
    • Changes in Runx2/Cbfa1 expression and activity during osteoblastic differentiation of human bone marrow stromal cells
    • JBMREJ, 0884-0431, 10.1359/jbmr.2003.18.2.213
    • Shui C. Spelsberg T.C. Riggs B.L. Khosla S. Changes in Runx2/Cbfa1 expression and activity during osteoblastic differentiation of human bone marrow stromal cells. J. Bone Miner. Res. 2003, 18:213. JBMREJ, 0884-0431, 10.1359/jbmr.2003.18.2.213.
    • (2003) J. Bone Miner. Res. , vol.18 , pp. 213
    • Shui, C.1    Spelsberg, T.C.2    Riggs, B.L.3    Khosla, S.4
  • 24
    • 53549123008 scopus 로고    scopus 로고
    • Nature, nurture, or chance: Stochastic gene expression and its consequences
    • CELLB5, 0092-8674, 10.1016/j.cell.2008.09.050
    • Raj A. van Oudenaarden A. Nature, nurture, or chance: Stochastic gene expression and its consequences. Cell 2008, 135:216. CELLB5, 0092-8674, 10.1016/j.cell.2008.09.050.
    • (2008) Cell , vol.135 , pp. 216
    • Raj, A.1    van Oudenaarden, A.2
  • 25
    • 38349185928 scopus 로고    scopus 로고
    • Effects of molecular memory and bursting on fluctuations in gene expression
    • SCIEAS, 0036-8075, 10.1126/science.1144331
    • Pedraza J.M. Paulsson J. Effects of molecular memory and bursting on fluctuations in gene expression. Science 2008, 319:339. SCIEAS, 0036-8075, 10.1126/science.1144331.
    • (2008) Science , vol.319 , pp. 339
    • Pedraza, J.M.1    Paulsson, J.2
  • 26
    • 0034225547 scopus 로고    scopus 로고
    • The chemical Langevin equation
    • JCPSA6, 0021-9606, 10.1063/1.481811.
    • Gillespie D.T. The chemical Langevin equation. J. Chem. Phys. 2000, 113:297. JCPSA6, 0021-9606, 10.1063/1.481811.
    • (2000) J. Chem. Phys. , vol.113 , pp. 297
    • Gillespie, D.T.1
  • 28
    • 0035439412 scopus 로고    scopus 로고
    • An algorithmic introduction to numerical simulation of stochastic differential equations
    • SJNAAM, 0036-1429.
    • Higham D. An algorithmic introduction to numerical simulation of stochastic differential equations. SIAM (Soc. Ind. Appl. Math.) J. Numer. Anal. 2001, 43:525. SJNAAM, 0036-1429.
    • (2001) SIAM (Soc. Ind. Appl. Math.) J. Numer. Anal. , vol.43 , pp. 525
    • Higham, D.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.