Response of soil microbial communities to different management practices in surface soils of a soybean agroecosystem in Argentina

European Journal of Soil Biology

Volumn 47, Issue 1, 2011, Pages 55-60

  Vargas Gil, S ^a   Meriles, J ^b   Conforto, C ^a   Basanta, M ^c   Radl, V ^d   Hagn, A ^d   Schloter, M ^d   March, G J ^a  

^a INSTITUTO NACIONAL DE TECNOLOGÍA AGROPECUARIA INTA   (Argentina)

^b Instituto Multidisciplinario de Biologia Vegetal   (Argentina)

^c INSTITUTO NACIONAL DE TECNOLOGÍA AGROPECUARIA   (Argentina)

^d INSTITUTE OF EPIDEMIOLOGY   (Germany)

Author keywords

DGGE; Microorganisms; PLFA; Soil health; Sustainability

Indexed keywords

GLYCINE MAX; ZEA MAYS;

EID: 78650679550     PISSN: 11645563     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.ejsobi.2010.11.006     Document Type: Article

References (38)

1. Abawi G.S., Widmer T.L. Impact of soil health management practices on soilborne pathogens, nematodes and root diseases of vegetable crops. Appl. Soil. Ecol. 2005, 15:37-47.
2. Aneja M.K., Sharma S., Fleischmann F., Stich S., Heller W., Bahnweg G., Munch J.C., Schloter M. Microbial colonization of beech and spruce litter-influence of decomposition site and plant litter species on the diversity of microbial community. Microbial Ecol. 2006, 52:127-135.
3. Böhme L., Langer U., Böhme F. Microbial biomass, enzyme activities and microbial community structure in two European long-term field experiments. Agric. Ecosyst. Environ. 2005, 109:141-152.
4. Bossio D.A., Girvan M.S., Verchot L., Bullimore J., Borelli T., Albrecht A., Scow K.M., Ball A.S., Pretty J.N., Osborn A.M. Soil microbial community response to land use change in an agricultural landscape of western Kenya. Microbial Ecol. 2005, 49:50-62.
5. Buschiazzo D.E., Panigatti J.L., Unger P.W. Tillage effects on soil properties and crop production in the subhumid and semiarid Argentinean Pampas. Soil Till. Res. 1998, 49:105-116.
6. Buyer J.S., Roberts D.P., Russek-Cohen E. Microbial community structure and function in the spermosphere as affected by soil and seed type. Can. J. Microbiol. 1999, 45:138-144.
7. Calderon F.J., Jackson L.E., Scow K.M., Rolston D.E. Short-term dynamics of nitrogen, microbial activity, and phospholipid fatty acids after tillage. Soil Sci. Soc. Am. J. 2001, 65:118-126.
8. Carlile M.J., Watkinson S.C., Gooday G.W. The Fungi 2001, Academic Press, London, UK.
9. Doran J., Smith M.S. Organic matter management and utilization of soil and fertilizer nutrients. Soil Fertility Ad Organic Matter as Critic Components of Production Systems 1987, 53-72. SSSA Spec. Publ. 19, SSSA, Madison, WI. J.J. Mortvedt (Ed.).
10. Drijber R.A., Doran J.W., Parkhusrst A.M., Lyon D.J. Changes in soil microbial community structure with tillage under long-term wheat-fallow management. Soil Biol. Biochem. 2003, 32:1419-1430.
11. Dunbar J., Ticknor L.O., Kuske C.R. Assessment of microbial diversity in four southwestern United States soils by 16S rRNA gene terminal restriction fragment analysis. Appl. Environ. Microbiol. 2000, 66:2943-2950.
12. Elliott L.F., Stott D.E. Influence of no-till cropping systems on microbial relationships. Adv. Agron. 1997, 60:121-147.
13. Esperschütz J., Gattinger A., Mäder P., Schloter M., Fließbach A. Response of soil microbial biomass and community structures to conventional and organic farming systems under identical crop rotations. FEMS Microbiol. Ecol. 2007, 61:26-37.
14. Feng Y., Motta A.C., Reeves D.W., Burnester C.H., van Santen E., Osborne J.A. Soil microbial communities under conventional-till and no-till continuous cotton systems. Soil Biol. Biochem. 2003, 35:1693-1703.
15. Frey S.D., Elliot E.T., Paustian K. Bacterial and fungal abundance and biomass in conventional and no-tillage agroecosystems along two climatic gradients. Soil Biol. Biochem. 1999, 31:573-585.
16. Frostegard A., Tunlid A., Baath E. Phospholipid fatty acid composition, biomass, and activity of microbial communities from two soil types experimentally exposed to different heavy metals. Appl. Environ. Microbiol. 1993, 59:3605-3617.
17. Giller P.S. The diversity of soil communities, the "poor man's tropical forest" Biodiv. Conserv. 1996, 5:135-168.
18. Grayston S.J., Wang S., Campbell C.D., Edwards A.C. Selective influence of plant species on microbial diversity in the rhizosphere. Soil Biol. Biochem. 1998, 31:145-153.
19. Griffiths R.I., Whiteley A.S., O'Donnel A.G., Bailey M.J. Rapid method for the coextraction of DNA and RNA from natural environments for analysis of ribosomal DNA- and rRNA-based microbial community composition. Appl. Environ. Microbiol. 2000, 66:5488-5491.
20. Hartmann M., Fliessbach A., Oberholzer H.R., Widmer F. Ranking the magnitude of crop and farming system effects on soil microbial biomass and genetic structure of bacterial communities. FEMS Microbiol. Ecol. 2006, 57:378-388.
21. Heukeshoven J., Dernick R. Neue ergebnisse zum mechanismus der silberfaerbung. Electrophorese Forum '86 1986, 22-27. Technical University of Munich, Munich. B.J. Radola (Ed.).
22. Ibekwe A.M., Kennedy A.C., Halvorson J.J., Yang C.H. Characterization of developing microbial communities in Mount St. Helens pyroclastic substrate. Soil Biol. Biochem. 2007, 39:2496-2507.
23. Jawson M.D., Franzluebbers A.J., Galusha D.K., Aiken R.M. Soil fumigation within monoculture and rotations: response of corn and mycorrhiza. Agron. J. 1993, 85:1174-1180.
24. Kakirde K.S., Larissa C., Parsley C., Liles M.R. Size does matter: application-driven approaches for soil metagenomics. Soil Biol. Biochem. 2010, 42:1911-1923.
25. Li W., Zhan C., Jiang H., Xin G., Yang Z. Changes in soil microbial community associated with invasion of the exotic weed, Mikania micrantha H.B.K. Plant Soil 2006, 281:309-324.
26. Lupwayi N.Z., Rice W.A., Clayton G.W. Soil microbial diversity and community structure under wheat as influenced by tillage and crop rotation. Soil Biol. Biochem. 1998, 30:1733-1741.
27. Martiny J.B.H., Bohannan B.J.M., Brown J.H., Colwell R.K., Fuhrman J.A., Green J.L., Horner-Devine M.C., Kane M., Krumins J.A., Kuske C.R., Morin P.J., Naeem S., Ovreas L., Reysenbach A.L., Smith V.H., Staley J.T. Microbial biogeography: putting microorganisms on the map. Nat. Rev. Microbiol. 2006, 4:102-112.
28. Meriles J.M., Vargas Gil S., Conforto C., Figoni G., Lovera E., March G.J., Guzmán C.A. Soil microbial communities under different soybean cropping systems: characterization of microbial population dynamics, soil microbial activity, microbial biomass, and fatty acid profiles. Soil Till. Res. 2009, 103:271-281.
29. Meriles J.M., Vargas Gil S., Haro R., March G.J., Guzmán C.A. Glyphosate and previous crop residue effect on deleterious and beneficial soil-borne fungi from a peanut-corn-soybean rotation. J. Phytopathol. 2006, 154:1-8.
30. Rahman M.H., Okubo A., Sugiyama S., Mayland H.F. Physical, chemical and microbiological properties of an andisol as related to land use and tillage practice. Soil Till. Res. 2008, 101:10-19.
31. Salles J.F., van Veen J.A., van Elsas J.D. Multivariate analyses of Burkholderia species in soil: effect of crop and land use history. Appl. Environ. Microbiol. 2004, 70:4012-4020.
32. SAGyP.Secretaría de Agricultura, Ganadería y Pesca de la Nación La Agricultura en la Argentina, Ministerio de Economía 2007, Buenos Aires, Argentina.
33. Spedding T.A., Hamel C., Mehuys G.R., Madramootoo C.A. Soil microbial dynamics in maize-growing soil under different tillage and residue management systems. Soil Biol. Biochem. 2004, 36:499-512.
34. Treonis A.M., Austin E.E., Jeffrey S., Buyer S., Maul J.E., Spicer L., Zasada I.A. Effects of organic amendment and tillage on soil microorganisms and microfauna. Appl. Soil. Ecol. 2010, 46:103-110.
35. Vargas Gil S., Meriles J., Conforto C., Figoni G., Basanta M., Lovera E., March G.J. Field assessment of soil biological and chemical quality in response to crop management practices. World J. Microbiol. Biotechnol. 2009, 25:439-448.
36. Wander M.M., Hedrick D.S., Kaufman D., Traina S.J., Stinner B.R., Kehrmeyer S.R., White D.C. The functional significance of the microbial biomass in organic and conventionally managed soils. Plant Soil 1995, 170:87-97.
37. White T.J., Buns T.D., Lee S., Taylor J. Analysis of phylogenetic relationships by amplification and direct sequencing of ribosomal RNA genes. PCR Protocols: A Guide to Methods and Applications 1990, 315-322. Academic, New York. M.A. Innis, D.H. Gefland, J.J. Sninsky, T.J. White (Eds.).
38. Zelles L., Bai Q.Y., Rackwitz R., Chadwick D., Beese F. Determination of hospholipids and lipopolysaccharide-dericed fatty acids as an estimate of microbial biomass and community structure in soils. Biol. Fertil. Soil. 1995, 19:115-123.