메뉴 건너뛰기




Volumn 28, Issue 1, 2011, Pages 437-447

Evolution of function of a fused metazoan tRNA synthetase

Author keywords

alternative splicing; GAIT element; glutamyl prolyl tRNA synthetase; Nematostella vectensis; tRNA synthetase; WHEP TRS domain

Indexed keywords

AMINO ACID TRANSFER RNA LIGASE; GAMMA INTERFERON; GLUTAMATE TRANSFER RNA LIGASE; GLUTAMYLPROLYL TRANSFER RNA SYNTHETASE; HELIX LOOP HELIX PROTEIN; HYBRID PROTEIN; INTERFERON GAMMA ACTIVATED INHIBITOR OF TRANSLATION; MESSENGER RNA; RNA; RNA BINDING PROTEIN; TRANSFER RNA; UNCLASSIFIED DRUG;

EID: 78650505152     PISSN: 07374038     EISSN: 15371719     Source Type: Journal    
DOI: 10.1093/molbev/msq246     Document Type: Article
Times cited : (25)

References (36)
  • 1
    • 67651095905 scopus 로고    scopus 로고
    • Two-site phosphorylation of EPRS coordinates multimodal regulation of noncanonical translational control activity
    • Arif A, Jia J, Mukhopadhyay R, Willard B, Kinter M, Fox PL. 2009. Two-site phosphorylation of EPRS coordinates multimodal regulation of noncanonical translational control activity. Mol Cell. 35:164-180.
    • (2009) Mol Cell , vol.35 , pp. 164-180
    • Arif, A.1    Jia, J.2    Mukhopadhyay, R.3    Willard, B.4    Kinter, M.5    Fox, P.L.6
  • 2
    • 0034737704 scopus 로고    scopus 로고
    • A gene fusion event in the evolution of aminoacyl-tRNA synthetases
    • Berthonneau E, Mirande M. 2000. A gene fusion event in the evolution of aminoacyl-tRNA synthetases. FEBS Lett. 470:300-304.
    • (2000) FEBS Lett , vol.470 , pp. 300-304
    • Berthonneau, E.1    Mirande, M.2
  • 3
    • 39149126359 scopus 로고    scopus 로고
    • Alternative splicing and protein structure evolution
    • Birzele F, Csaba G, Zimmer R. 2008. Alternative splicing and protein structure evolution. Nucleic Acids Res. 36:550-558.
    • (2008) Nucleic Acids Res , vol.36 , pp. 550-558
    • Birzele, F.1    Csaba, G.2    Zimmer, R.3
  • 4
    • 0029759718 scopus 로고    scopus 로고
    • Translocation events in the evolution of aminoacyl-tRNA synthetases
    • Brenner S, Corrochano LM. 1996. Translocation events in the evolution of aminoacyl-tRNA synthetases. Proc Natl Acad Sci USA. 93(16):8485-8489.
    • (1996) Proc Natl Acad Sci USA , vol.93 , Issue.16 , pp. 8485-8489
    • Brenner, S.1    Corrochano, L.M.2
  • 5
    • 0034141480 scopus 로고    scopus 로고
    • A recurrent RNA-binding domain is appended to eukaryotic aminoacyl-tRNA synthetases
    • Cahuzac B, Berthonneau E, Birlirakis N, Guittet E, Mirande M. 2000. A recurrent RNA-binding domain is appended to eukaryotic aminoacyl-tRNA synthetases. EMBO J. 19:445-452.
    • (2000) EMBO J , vol.19 , pp. 445-452
    • Cahuzac, B.1    Berthonneau, E.2    Birlirakis, N.3    Guittet, E.4    Mirande, M.5
  • 6
    • 33644915321 scopus 로고    scopus 로고
    • Fusion and fission, the evolution of sterol carrier protein-2
    • Edqvist J, Blomqvist K. 2006. Fusion and fission, the evolution of sterol carrier protein-2. J Mol Evol. 62(3):292-306.
    • (2006) J Mol Evol , vol.62 , Issue.3 , pp. 292-306
    • Edqvist, J.1    Blomqvist, K.2
  • 7
    • 2542546770 scopus 로고    scopus 로고
    • Origins of bilateral symmetry: Hox and dpp expression in a sea anemone
    • Finnerty JR, Pang K, Burton P, Paulson D, Martindale MQ. 2004. Origins of bilateral symmetry: Hox and dpp expression in a sea anemone. Science 304(5675):1335-1337.
    • (2004) Science , vol.304 , Issue.5675 , pp. 1335-1337
    • Finnerty, J.R.1    Pang, K.2    Burton, P.3    Paulson, D.4    Martindale, M.Q.5
  • 8
    • 0033782994 scopus 로고    scopus 로고
    • Aminoacyl-tRNA synthesis
    • Ibba M, Söll D. 2000. Aminoacyl-tRNA synthesis. Annu Rev Biochem. 69:617-650.
    • (2000) Annu Rev Biochem , vol.69 , pp. 617-650
    • Ibba, M.1    Söll, D.2
  • 9
    • 0034719153 scopus 로고    scopus 로고
    • Structural analysis of multifunctional peptide motifs in human bifunctional tRNA synthetase: Identification of RNA-binding residues and functional implications for tandem repeats
    • Jeong EJ, Hwang GS, Kim KH, Kim MJ, Kim S, Kim KS. 2000. Structural analysis of multifunctional peptide motifs in human bifunctional tRNA synthetase: identification of RNA-binding residues and functional implications for tandem repeats. Biochemistry 39:15775-15782.
    • (2000) Biochemistry , vol.39 , pp. 15775-15782
    • Jeong, E.J.1    Hwang, G.S.2    Kim, K.H.3    Kim, M.J.4    Kim, S.5    Kim, K.S.6
  • 10
    • 29344470071 scopus 로고    scopus 로고
    • Is the "big bang" in animal evolution real?
    • Jermiin LS, Poladian L, Charleston MA. 2005. Is the "big bang" in animal evolution real? Science 310:1910-1911.
    • (2005) Science , vol.310 , pp. 1910-1911
    • Jermiin, L.S.1    Poladian, L.2    Charleston, M.A.3
  • 11
    • 40849118528 scopus 로고    scopus 로고
    • WHEP domains direct noncanonical function of glutamyl-prolyl tRNA synthetase in translational control of gene expression
    • Jia J, Arif A, Ray PS, Fox PL. 2008. WHEP domains direct noncanonical function of glutamyl-prolyl tRNA synthetase in translational control of gene expression. Mol Cell. 29:679-690.
    • (2008) Mol Cell , vol.29 , pp. 679-690
    • Jia, J.1    Arif, A.2    Ray, P.S.3    Fox, P.L.4
  • 12
    • 33645820581 scopus 로고    scopus 로고
    • The evolution of the histone methyltransferase gene Su(var)3-9 in metazoans includes a fusion with and a re-fission from a functionally unrelated gene
    • Krauss V, Fassl A, Fiebig P, Patties I, Sass H. 2006. The evolution of the histone methyltransferase gene Su(var)3-9 in metazoans includes a fusion with and a re-fission from a functionally unrelated gene. BMC Evol Biol. 6:18.
    • (2006) BMC Evol Biol , vol.6 , pp. 18
    • Krauss, V.1    Fassl, A.2    Fiebig, P.3    Patties, I.4    Sass, H.5
  • 13
    • 13144259695 scopus 로고    scopus 로고
    • Relative rates of gene fusion and fission in multi-domain proteins
    • Kummerfeld SK, Teichmann SA. 2005. Relative rates of gene fusion and fission in multi-domain proteins. Trends Genet. 21(1):25-30.
    • (2005) Trends Genet , vol.21 , Issue.1 , pp. 25-30
    • Kummerfeld, S.K.1    Teichmann, S.A.2
  • 15
    • 55049140658 scopus 로고    scopus 로고
    • DAPK-ZIPK-L13a axis constitutes a negative-feedback module regulating inflammatory gene expression
    • Mukhopadhyay R, Ray PS, Arif A, Brady AK, Kinter M, Fox PL. 2008. DAPK-ZIPK-L13a axis constitutes a negative-feedback module regulating inflammatory gene expression. Mol Cell. 32:371-382.
    • (2008) Mol Cell , vol.32 , pp. 371-382
    • Mukhopadhyay, R.1    Ray, P.S.2    Arif, A.3    Brady, A.K.4    Kinter, M.5    Fox, P.L.6
  • 16
    • 75849145292 scopus 로고    scopus 로고
    • Expansion of the eukaryotic proteome by alternative splicing
    • Nilsen TW, Graveley BR. 2010. Expansion of the eukaryotic proteome by alternative splicing. Nature 463(7280):457-463.
    • (2010) Nature , vol.463 , Issue.7280 , pp. 457-463
    • Nilsen, T.W.1    Graveley, B.R.2
  • 18
    • 34250835937 scopus 로고    scopus 로고
    • Evolution of the iron-responsive element
    • Piccinelli P, Samuelsson T. 2007. Evolution of the iron-responsive element. RNA 13:952-966.
    • (2007) RNA , vol.13 , pp. 952-966
    • Piccinelli, P.1    Samuelsson, T.2
  • 19
    • 34447300950 scopus 로고    scopus 로고
    • Sea anemone genome reveals ancestral eumetazoan gene repertoire and genomic organization
    • (19 co-authors)
    • Putnam NH, Srivastava M, Hellsten U, et al. (19 co-authors). 2007. Sea anemone genome reveals ancestral eumetazoan gene repertoire and genomic organization. Science 317:86-94.
    • (2007) Science , vol.317 , pp. 86-94
    • Putnam, N.H.1    Srivastava, M.2    Hellsten, U.3
  • 20
    • 34547235967 scopus 로고    scopus 로고
    • A post-transcriptional pathway represses monocyte VEGF-A expression and angiogenic activity
    • Ray PS, Fox PL. 2007. A post-transcriptional pathway represses monocyte VEGF-A expression and angiogenic activity. EMBO J. 26:3360-3372.
    • (2007) EMBO J , vol.26 , pp. 3360-3372
    • Ray, P.S.1    Fox, P.L.2
  • 22
    • 0000781162 scopus 로고    scopus 로고
    • A multifunctional repeated motif is present in human bifunctional tRNA synthetase
    • Rho SB, Lee JS, Jeong EJ, Kim KS, Kim YG, Kim S. 1998. A multifunctional repeated motif is present in human bifunctional tRNA synthetase. J Biol Chem. 273(18):11267-11273.
    • (1998) J Biol Chem , vol.273 , Issue.18 , pp. 11267-11273
    • Rho, S.B.1    Lee, J.S.2    Jeong, E.J.3    Kim, K.S.4    Kim, Y.G.5    Kim, S.6
  • 23
    • 0000983324 scopus 로고    scopus 로고
    • Interaction between human tRNA synthetases involves repeated sequence elements
    • Rho SB, Lee KH, Kim JW, Shiba K, Jo YJ, Kim S. 1996. Interaction between human tRNA synthetases involves repeated sequence elements. Proc Natl Acad Sci USA. 93:10128-10133.
    • (1996) Proc Natl Acad Sci USA , vol.93 , pp. 10128-10133
    • Rho, S.B.1    Lee, K.H.2    Kim, J.W.3    Shiba, K.4    Jo, Y.J.5    Kim, S.6
  • 24
    • 0035478911 scopus 로고    scopus 로고
    • Aminoacyl-tRNA synthetases: Potential markers of genetic code development
    • Ribas de Pouplana L, Schimmel P. 2001. Aminoacyl-tRNA synthetases: potential markers of genetic code development. Trends Biochem Sci. 26(10):591-596.
    • (2001) Trends Biochem Sci , vol.26 , Issue.10 , pp. 591-596
    • Ribas De Pouplana, L.1    Schimmel, P.2
  • 25
    • 29344441657 scopus 로고    scopus 로고
    • Animal evolution and the molecular signature of radiations compressed in time
    • Rokas A, Kruger D, Carroll SB. 2005. Animal evolution and the molecular signature of radiations compressed in time. Science 310(5756):1933-1938.
    • (2005) Science , vol.310 , Issue.5756 , pp. 1933-1938
    • Rokas, A.1    Kruger, D.2    Carroll, S.B.3
  • 26
    • 0037371348 scopus 로고    scopus 로고
    • Transcript-selective translational silencing by gamma interferon is directed by a novel structural element in the ceruloplasmin mRNA 3' untranslated region
    • Sampath P, Mazumder B, Seshadri V, Fox PL. 2003. Transcript-selective translational silencing by gamma interferon is directed by a novel structural element in the ceruloplasmin mRNA 3' untranslated region. Mol Cell Biol. 23:1509-1519.
    • (2003) Mol Cell Biol , vol.23 , pp. 1509-1519
    • Sampath, P.1    Mazumder, B.2    Seshadri, V.3    Fox, P.L.4
  • 27
    • 5444271940 scopus 로고    scopus 로고
    • Noncanonical function of glutamyl-prolyl-tRNA synthetase: Gene-specific silencing of translation
    • (11 co-authors)
    • Sampath P, Mazumder B, Seshadri V, et al. (11 co-authors). 2004. Noncanonical function of glutamyl-prolyl-tRNA synthetase: gene-specific silencing of translation. Cell 119:195-208.
    • (2004) Cell , vol.119 , pp. 195-208
    • Sampath, P.1    Mazumder, B.2    Seshadri, V.3
  • 28
    • 33747071203 scopus 로고    scopus 로고
    • Functional development of Src tyrosine kinases during evolution from a unicellular ancestor to multicellular animals
    • Segawa Y, Suga H, Iwabe N, Oneyama C, Akagi T, Miyata T, Okada M. 2006. Functional development of Src tyrosine kinases during evolution from a unicellular ancestor to multicellular animals. Proc Natl Acad Sci USA. 103:12021-12026.
    • (2006) Proc Natl Acad Sci USA , vol.103 , pp. 12021-12026
    • Segawa, Y.1    Suga, H.2    Iwabe, N.3    Oneyama, C.4    Akagi, T.5    Miyata, T.6    Okada, M.7
  • 29
    • 0036892971 scopus 로고    scopus 로고
    • Intron positions delineate the evolutionary path of a pervasively appended peptide in five human aminoacyl-tRNA synthetases
    • Shiba K. 2002. Intron positions delineate the evolutionary path of a pervasively appended peptide in five human aminoacyl-tRNA synthetases. J Mol Evol. 55:727-733.
    • (2002) J Mol Evol , vol.55 , pp. 727-733
    • Shiba, K.1
  • 30
    • 0036143446 scopus 로고    scopus 로고
    • Genomes in flux: The evolution of archaeal and proteobacterial gene content
    • Snel B, Bork P, Huynen MA. 2002. Genomes in flux: the evolution of archaeal and proteobacterial gene content. Genome Res. 12: 17-25.
    • (2002) Genome Res , vol.12 , pp. 17-25
    • Snel, B.1    Bork, P.2    Huynen, M.A.3
  • 31
    • 33846058302 scopus 로고    scopus 로고
    • Rel homology domain-containing transcription factors in the cnidarian Nematostella vectensis
    • Sullivan JC, Kalaitzidis D, Gilmore TD, Finnerty JR. 2007. Rel homology domain-containing transcription factors in the cnidarian Nematostella vectensis. Dev Genes Evol. 217:63-72.
    • (2007) Dev Genes Evol , vol.217 , pp. 63-72
    • Sullivan, J.C.1    Kalaitzidis, D.2    Gilmore, T.D.3    Finnerty, J.R.4
  • 32
    • 34447330054 scopus 로고    scopus 로고
    • A high percentage of introns in human genes were present early in animal evolution: Evidence from the basal metazoan Nematostella vectensis
    • Sullivan JC, Reitzel AM, Finnerty JR. 2006. A high percentage of introns in human genes were present early in animal evolution: evidence from the basal metazoan Nematostella vectensis. Genome Inform. 17:219-229.
    • (2006) Genome Inform , vol.17 , pp. 219-229
    • Sullivan, J.C.1    Reitzel, A.M.2    Finnerty, J.R.3
  • 33
    • 70350241235 scopus 로고    scopus 로고
    • Two alleles of NF-kappaB in the sea anemone Nematostella vectensis are widely dispersed in nature and encode proteins with distinct activities
    • Sullivan JC, Wolenski FS, Reitzel AM, French CE, Traylor-Knowles N, Gilmore TD, Finnerty JR. 2009. Two alleles of NF-kappaB in the sea anemone Nematostella vectensis are widely dispersed in nature and encode proteins with distinct activities. PLoS One. 4(10):e7311.
    • (2009) PLoS One , vol.4 , Issue.10
    • Sullivan, J.C.1    Wolenski, F.S.2    Reitzel, A.M.3    French, C.E.4    Traylor-Knowles, N.5    Gilmore, T.D.6    Finnerty, J.R.7
  • 34
    • 58249110558 scopus 로고    scopus 로고
    • Genome-wide polysome profiling reveals an inflammation-responsive post-transcriptional operon in IFN-gamma-activated monocytes
    • Vyas K, Chaudhuri S, Leaman DW, Komar AA, Musiyenko A, Barik S, Mazumder B. 2009. Genome-wide polysome profiling reveals an inflammation-responsive post-transcriptional operon in IFN-gamma-activated monocytes. Mol Cell Biol. 29:458-470.
    • (2009) Mol Cell Biol , vol.29 , pp. 458-470
    • Vyas, K.1    Chaudhuri, S.2    Leaman, D.W.3    Komar, A.A.4    Musiyenko, A.5    Barik, S.6    Mazumder, B.7
  • 36
    • 42449149201 scopus 로고    scopus 로고
    • Relating alternative splicing to proteome complexity and genome evolution
    • Xing Y, Lee C. 2007. Relating alternative splicing to proteome complexity and genome evolution. Adv Exp Med Biol. 623:36-49.
    • (2007) Adv Exp Med Biol , vol.623 , pp. 36-49
    • Xing, Y.1    Lee, C.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.