-
1
-
-
0033523989
-
Protein interaction maps for complete genomes based on gene fusion events
-
A.J. Enright Protein interaction maps for complete genomes based on gene fusion events Nature 402 1999 86 90
-
(1999)
Nature
, vol.402
, pp. 86-90
-
-
Enright, A.J.1
-
2
-
-
0035753236
-
Functional associations of proteins in entire genomes by means of exhaustive detection of fusion events
-
RESEARCH0034, doi:10.1186/gb-2001-2-9-research0034
-
Enright, A.J. and Ouzounis, C.A. (2001) Functional associations of proteins in entire genomes by means of exhaustive detection of fusion events. Genome Biol. 2, RESEARCH0034, doi:10.1186/gb-2001-2-9-research0034 (http://genomebiology.com/2001/2/9/research/0034)
-
(2001)
Genome Biol.
, vol.2
-
-
Enright, A.J.1
Ouzounis, C.A.2
-
3
-
-
0033618555
-
Detecting protein function and protein-protein interactions from genome sequences
-
E.M. Marcotte Detecting protein function and protein-protein interactions from genome sequences Science 285 1999 751 753
-
(1999)
Science
, vol.285
, pp. 751-753
-
-
Marcotte, E.M.1
-
4
-
-
0034940467
-
Genes linked by fusion events are generally of the same function category: A systematic analysis of 30 microbial genomes
-
I. Yanai Genes linked by fusion events are generally of the same function category: a systematic analysis of 30 microbial genomes Proc. Natl. Acad. Sci. U. S. A. 98 2001 7940 7945
-
(2001)
Proc. Natl. Acad. Sci. U. S. A.
, vol.98
, pp. 7940-7945
-
-
Yanai, I.1
-
5
-
-
0033621536
-
Genome evolution: Gene fusions versus gene fission
-
B. Snel Genome evolution: gene fusions versus gene fission Trends Genet. 16 2000 9 11
-
(2000)
Trends Genet.
, vol.16
, pp. 9-11
-
-
Snel, B.1
-
6
-
-
0036143446
-
Genomes in flux: The evolution of archaeal and proteobacterial gene content
-
B. Snel Genomes in flux: the evolution of archaeal and proteobacterial gene content Genome Res. 12 2002 17 25
-
(2002)
Genome Res.
, vol.12
, pp. 17-25
-
-
Snel, B.1
-
7
-
-
2942622384
-
Algorithms for computing parsimonious evolutionary scenarios for genome evolution, the last universal common ancestor and dominance of horizontal gene transfer in the evolution of prokaryotes
-
doi:10.1186/gb-2001-2-9-research0034
-
Mirkin, B.G. et al. (2003) Algorithms for computing parsimonious evolutionary scenarios for genome evolution, the last universal common ancestor and dominance of horizontal gene transfer in the evolution of prokaryotes. BMC Evol. Biol. 3, 2, doi:10.1186/gb-2001-2-9-research0034 (http://www. biomedcentral.com/1471-2148/3/2)
-
(2003)
BMC Evol. Biol.
, vol.3
, pp. 2
-
-
Mirkin, B.G.1
-
8
-
-
0028961335
-
SCOP: A structural classification of proteins database for the investigation of sequences and structures
-
A.G. Murzin SCOP: a structural classification of proteins database for the investigation of sequences and structures J. Mol. Biol. 247 1995 536 540
-
(1995)
J. Mol. Biol.
, vol.247
, pp. 536-540
-
-
Murzin, A.G.1
-
9
-
-
0036087169
-
SUPERFAMILY:HMMs representing all proteins of known structure. SCOP sequence searches, alignments and genome assignments
-
J. Gough, and C. Chothia SUPERFAMILY:HMMs representing all proteins of known structure. SCOP sequence searches, alignments and genome assignments Nucleic Acids Res. 30 2002 268 272
-
(2002)
Nucleic Acids Res.
, vol.30
, pp. 268-272
-
-
Gough, J.1
Chothia, C.2
-
10
-
-
0035816218
-
Domain combinations in archaeal, eubacterial and eukaryotic proteomes
-
G. Apic Domain combinations in archaeal, eubacterial and eukaryotic proteomes J. Mol. Biol. 310 2001 311 325
-
(2001)
J. Mol. Biol.
, vol.310
, pp. 311-325
-
-
Apic, G.1
-
11
-
-
0036307754
-
The geometry of domain combination in proteins
-
M. Bashton, and C. Chothia The geometry of domain combination in proteins J. Mol. Biol. 315 2002 927 939
-
(2002)
J. Mol. Biol.
, vol.315
, pp. 927-939
-
-
Bashton, M.1
Chothia, C.2
-
12
-
-
0036719929
-
Genome trees and the tree of life
-
Y.I. Wolf Genome trees and the tree of life Trends Genet. 18 2002 472 479
-
(2002)
Trends Genet.
, vol.18
, pp. 472-479
-
-
Wolf, Y.I.1
-
13
-
-
0034780910
-
Horizontal gene transfer in prokaryotes: Quantification and classification
-
E.V. Koonin Horizontal gene transfer in prokaryotes: quantification and classification Annu. Rev. Microbiol. 55 2001 709 742
-
(2001)
Annu. Rev. Microbiol.
, vol.55
, pp. 709-742
-
-
Koonin, E.V.1
-
14
-
-
0030660581
-
A genomic perspective on protein families
-
R.L. Tatusov A genomic perspective on protein families Science 278 1997 631 637
-
(1997)
Science
, vol.278
, pp. 631-637
-
-
Tatusov, R.L.1
-
15
-
-
0035861990
-
Automatic clustering of orthologs and in-paralogs from pairwise species comparisons
-
M. Remm Automatic clustering of orthologs and in-paralogs from pairwise species comparisons J. Mol. Biol. 314 2001 1041 1052
-
(2001)
J. Mol. Biol.
, vol.314
, pp. 1041-1052
-
-
Remm, M.1
-
17
-
-
0035162592
-
The COG database: New developments in phylogenetic classification of proteins from complete genomes
-
R.L. Tatusov The COG database: new developments in phylogenetic classification of proteins from complete genomes Nucleic Acids Res. 29 2001 22 28
-
(2001)
Nucleic Acids Res.
, vol.29
, pp. 22-28
-
-
Tatusov, R.L.1
-
18
-
-
0032512051
-
The genome sequence of Rickettsia prowazekii and the origin of mitochondria
-
S.G. Andersson The genome sequence of Rickettsia prowazekii and the origin of mitochondria Nature 396 1998 133 140
-
(1998)
Nature
, vol.396
, pp. 133-140
-
-
Andersson, S.G.1
-
19
-
-
0035931926
-
Massive gene decay in the leprosy bacillus
-
S.T. Cole Massive gene decay in the leprosy bacillus Nature 409 2001 1007 1011
-
(2001)
Nature
, vol.409
, pp. 1007-1011
-
-
Cole, S.T.1
-
20
-
-
0345258403
-
Phylogenomic analysis of the Giardia intestinalis transcarboxylase reveals multiple instances of domain fusion and fission in the evolution of the biotin-dependent enzymes
-
Jordan I.K. et al. (2003). Phylogenomic analysis of the Giardia intestinalis transcarboxylase reveals multiple instances of domain fusion and fission in the evolution of the biotin-dependent enzymes. J. Mol. Microbial. Biotech. 5, 172-189
-
(2003)
J. Mol. Microbial. Biotech.
, vol.5
, pp. 172-189
-
-
Jordan, I.K.1
|