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Volumn 54, Issue 4, 2010, Pages 1191-1196

Genetic diversity of avian infectious bronchitis virus isolated from domestic chicken flocks and coronaviruses from feral pigeons in Brazil between 2003 and 2009

Author keywords

chicken; coronavirus; genetic diversity; nested PCR; phylogeny; pigeon

Indexed keywords

AVES; AVIAN INFECTIOUS BRONCHITIS VIRUS; COLUMBA; COLUMBA LIVIA; CORONAVIRUS; GALLUS GALLUS;

EID: 78650469686     PISSN: 00052086     EISSN: None     Source Type: Journal    
DOI: 10.1637/9371-041510-Reg.1     Document Type: Article
Times cited : (45)

References (46)
  • 1
    • 33846381376 scopus 로고    scopus 로고
    • Molecular analysis of Brazilian infectious bronchitis field isolates by reverse transcription-polymerase chain reaction, restriction fragment length polymorphism, and partial sequencing of the N gene
    • Abreu, J. T., J. S. Resende, R. B. Flatschart, A. V. Folgueras- Flatschart, A. C. Mendes, N. R. Martins, C. B. Silva, B. M. Ferreira, and M. Resende. Molecular analysis of Brazilian infectious bronchitis field isolates by reverse transcription-polymerase chain reaction, restriction fragment length polymorphism, and partial sequencing of the N gene. Avian Dis. 50:494-501. 2006.
    • (2006) Avian Dis. , vol.50 , pp. 494-501
    • Abreu, J.T.1    Resende, J.S.2    Flatschart, R.B.3    Folgueras-Flatschart, A.V.4    Mendes, A.C.5    Martins, N.R.6    Silva, C.B.7    Ferreira, B.M.8    Resende, M.9
  • 2
    • 34248586125 scopus 로고    scopus 로고
    • Phylogenetic analysis of partial S1 and N gene sequences of infectious bronchitis virus isolates from Italy revealed genetic diversity and recombination
    • Bochkov, Y. A., G. Tosi, P. Massi, and V. V. Drygin. Phylogenetic analysis of partial S1 and N gene sequences of infectious bronchitis virus isolates from Italy revealed genetic diversity and recombination. Virus Genes 35:65-71. 2007.
    • (2007) Virus Genes , vol.35 , pp. 65-71
    • Bochkov, Y.A.1    Tosi, G.2    Massi, P.3    Drygin, V.V.4
  • 3
    • 0023264833 scopus 로고
    • Completion of the sequence of the genome of the coronavirus avian infectious bronchitis virus
    • Boursnell, M. E., T. D. Brown, I. J. Foulds, P. F. Green, F. M. Tomley, and M. M. Binns. Completion of the sequence of the genome of the coronavirus avian infectious bronchitis virus. J. Gen. Virol. 68:57-77. 1987.
    • (1987) J. Gen. Virol. , vol.68 , pp. 57-77
    • Boursnell, M.E.1    Brown, T.D.2    Foulds, I.J.3    Green, P.F.4    Tomley, F.M.5    Binns, M.M.6
  • 5
    • 0033427115 scopus 로고    scopus 로고
    • Co-circulation of four types of infectious bronchitis virus (793/B, 624/I, B1648 and Massachusetts)
    • Capua, I., Z. Minta, E. Karpinska, K. Mawditt, P. Britton, D. Cavanagh, and R. E. Gough. Co-circulation of four types of infectious bronchitis virus (793/B, 624/I, B1648 and Massachusetts). Avian Pathol. 28:587-592. 1999.
    • (1999) Avian Pathol. , vol.28 , pp. 587-592
    • Capua, I.1    Minta, Z.2    Karpinska, E.3    Mawditt, K.4    Britton, P.5    Cavanagh, D.6    Gough, R.E.7
  • 6
    • 34147160583 scopus 로고    scopus 로고
    • Coronavirus avian infectious bronchitis virus
    • Cavanagh, D. Coronavirus avian infectious bronchitis virus. Vet. Res. 38:281-297. 2007.
    • (2007) Vet. Res. , vol.38 , pp. 281-297
    • Cavanagh, D.1
  • 7
    • 28944450194 scopus 로고    scopus 로고
    • Coronaviruses in poultry and other birds
    • Cavanagh, D. Coronaviruses in poultry and other birds. Avian Pathol. 34:439-448. 2005.
    • (2005) Avian Pathol. , vol.34 , pp. 439-448
    • Cavanagh, D.1
  • 8
    • 0022743435 scopus 로고
    • Coronavirus IBV: Removal of spike glycopolypeptide S1 by urea abolishes infectivity and hemagglutination but not attachment to cells
    • Cavanagh, D., and P. J. Davis. Coronavirus IBV: removal of spike glycopolypeptide S1 by urea abolishes infectivity and hemagglutination but not attachment to cells. J. Gen. Virol. 67:1443-1448. 1986.
    • (1986) J. Gen. Virol. , vol.67 , pp. 1443-1448
    • Cavanagh, D.1    Davis, P.J.2
  • 9
    • 0030898889 scopus 로고    scopus 로고
    • Relationship between sequence variation in the S1 spike protein of infectious bronchitis virus and the extent of cross-protection in vivo
    • Cavanagh, D., M. M. Elus, and J. K. Cook. Relationship between sequence variation in the S1 spike protein of infectious bronchitis virus and the extent of cross-protection in vivo. Avian Pathol. 26:63-74. 1997.
    • (1997) Avian Pathol. , vol.26 , pp. 63-74
    • Cavanagh, D.1    Elus, M.M.2    Cook, J.K.3
  • 10
    • 0033831567 scopus 로고    scopus 로고
    • Characterization of infectious bronchitis viruses isolated from outbreak of disease in commercial flocks in Brazil
    • Di Fabio, J., L. I. Rossini, S. J. Orbell, G. Paul, M. B. Huggins, A. Malo, B. G. Silva, and J. K. Cook. Characterization of infectious bronchitis viruses isolated from outbreak of disease in commercial flocks in Brazil. Avian Dis. 44:582-589. 2000.
    • (2000) Avian Dis. , vol.44 , pp. 582-589
    • Di Fabio, J.1    Rossini, L.I.2    Orbell, S.J.3    Paul, G.4    Huggins, M.B.5    Malo, A.6    Silva, B.G.7    Cook, J.K.8
  • 11
    • 41649096954 scopus 로고    scopus 로고
    • Molecular epidemiology of avian infectious bronchitis virus in Spain over fourteen-year period
    • Dolz, R., J. Pujols, G. Ordóñez, R. Porta, and N. Majó. Molecular epidemiology of avian infectious bronchitis virus in Spain over fourteen-year period. Virology 374:50-59. 2008.
    • (2008) Virology , vol.374 , pp. 50-59
    • Dolz, R.1    Pujols, J.2    Ordóñez, G.3    Porta, R.4    Majó, N.5
  • 12
    • 0030747157 scopus 로고    scopus 로고
    • RNA virus mutations and fitness for survival
    • Domingo, E., and J. J. Holland. RNA virus mutations and fitness for survival. Ann. Rev. Microbiol. 51:151-178. 1997.
    • (1997) Ann. Rev. Microbiol. , vol.51 , pp. 151-178
    • Domingo, E.1    Holland, J.J.2
  • 14
    • 0032193104 scopus 로고    scopus 로고
    • The early history of infectious bronchitis
    • Fabricant, J. The early history of infectious bronchitis. Avian Dis. 42:648-650. 1998.
    • (1998) Avian Dis. , vol.42 , pp. 648-650
    • Fabricant, J.1
  • 15
    • 0036285374 scopus 로고    scopus 로고
    • Molecular epizootiology of infectious bronchitis virus in Sweden indicating the involvement of a vaccine strain
    • Farsang, A., C. Ros, L. H. M. Renströn, C. Baule, T. Soós, and S. Belák. Molecular epizootiology of infectious bronchitis virus in Sweden indicating the involvement of a vaccine strain. Avian Pathol. 31:229-236. 2002.
    • (2002) Avian Pathol. , vol.31 , pp. 229-236
    • Farsang, A.1    Ros, C.2    Renströn, L.H.M.3    Baule, C.4    Soós, T.5    Belák, S.6
  • 18
    • 20244387729 scopus 로고    scopus 로고
    • Identification of novel subgenomic RNAs and noncanonical transcription initiation signals of severe acute respiratory syndrome coronavirus
    • Hussain, S. J., Y. Pan, Y. Chen, J. Yang, Y. Xu, Y. Peng, Z. Wu, Y. Li, P. Zhu, D. Tien, and D. Guo. Identification of novel subgenomic RNAs and noncanonical transcription initiation signals of severe acute respiratory syndrome coronavirus. J. Virol. 79:5288-5295. 2005.
    • (2005) J. Virol. , vol.79 , pp. 5288-5295
    • Hussain, S.J.1    Pan, Y.2    Chen, Y.3    Yang, J.4    Xu, Y.5    Peng, Y.6    Wu, Z.7    Li, Y.8    Zhu, P.9    Tien, D.10    Guo, D.11
  • 19
    • 33746139679 scopus 로고    scopus 로고
    • Isolation of a variant infectious virus in Australia that further illustrates diversity among emerging strains
    • Ignjatovic, J., G. Gould, and S. Sapats. Isolation of a variant infectious virus in Australia that further illustrates diversity among emerging strains. Arch. Virol. 151:1567-1585. 2006.
    • (2006) Arch. Virol. , vol.151 , pp. 1567-1585
    • Ignjatovic, J.1    Gould, G.2    Sapats, S.3
  • 20
    • 23844495460 scopus 로고    scopus 로고
    • Identification of previously unknown antigenic epitopes on the S and N proteins of avian infectious bronchitis virus
    • Ignjatovic, J., and S. Sapats. Identification of previously unknown antigenic epitopes on the S and N proteins of avian infectious bronchitis virus. Arch. Virol. 150:1813-1831. 2005.
    • (2005) Arch. Virol. , vol.150 , pp. 1813-1831
    • Ignjatovic, J.1    Sapats, S.2
  • 21
    • 37349110271 scopus 로고    scopus 로고
    • Sequence analysis of the S1 glycoprotein gene of infectious bronchitis viruses: Identification of a novel phylogenetic group in Korea
    • Jang, J., H. Sung, C. Song, and H. Kwon. Sequence analysis of the S1 glycoprotein gene of infectious bronchitis viruses: identification of a novel phylogenetic group in Korea. J. Vet. Sci. 8(4):401-407. 2007.
    • (2007) J. Vet. Sci. , vol.8 , Issue.4 , pp. 401-407
    • Jang, J.1    Sung, H.2    Song, C.3    Kwon, H.4
  • 22
    • 20044393041 scopus 로고    scopus 로고
    • Molecular identification and characterization of novel coronaviruses infecting graylag geese (Anser anser), feral pigeons (Columba livia) and mallards (Anas platyrhynchos)
    • Jonassen, C. M., T. Kofstad, I. Larsen, A. Lovland, K. Handeland, A. Follestad, and A. Lillehaug. Molecular identification and characterization of novel coronaviruses infecting graylag geese (Anser anser), feral pigeons (Columba livia) and mallards (Anas platyrhynchos). J. Gen. Virol. 86:1597-1607. 2005.
    • (2005) J. Gen. Virol. , vol.86 , pp. 1597-1607
    • Jonassen, C.M.1    Kofstad, T.2    Larsen, I.3    Lovland, A.4    Handeland, K.5    Follestad, A.6    Lillehaug, A.7
  • 23
    • 0030633479 scopus 로고    scopus 로고
    • The molecular biology of coronaviruses
    • Lai, M. M. C., and D. Cavanagh. The molecular biology of coronaviruses. Adv. Virus Res. 48:1-100. 1997.
    • (1997) Adv. Virus Res. , vol.48 , pp. 1-100
    • Lai, M.M.C.1    Cavanagh, D.2
  • 24
    • 77956673818 scopus 로고    scopus 로고
    • Evolution of avian infectious bronchitis virus: Genetic drift and recombination
    • Lee, C. Evolution of avian infectious bronchitis virus: genetic drift and recombination. Korean J. Vet. Serv. 25:97-103. 2002.
    • (2002) Korean J. Vet. Serv. , vol.25 , pp. 97-103
    • Lee, C.1
  • 25
    • 0034788342 scopus 로고    scopus 로고
    • Origin and evolution of Georgia 98 (GA98), a new serotype of avian infectious bronchitis virus
    • Lee, C. W., and M. W. Jackwood. Origin and evolution of Georgia 98 (GA98), a new serotype of avian infectious bronchitis virus. Virus Res. 80(1-2):33-39. 2001.
    • (2001) Virus Res. , vol.80 , Issue.1-2 , pp. 33-39
    • Lee, C.W.1    Jackwood, M.W.2
  • 26
    • 40649113591 scopus 로고    scopus 로고
    • Identification of the avian infectious bronchitis coronaviruses with mutations in gene 3
    • Liu, S., Q. Zhang, J. Chen, Z. Han, Y. Shao, X. Kong, and G. Tong. Identification of the avian infectious bronchitis coronaviruses with mutations in gene 3. Gene 412:12-25. 2008.
    • (2008) Gene , vol.412 , pp. 12-25
    • Liu, S.1    Zhang, Q.2    Chen, J.3    Han, Z.4    Shao, Y.5    Kong, X.6    Tong, G.7
  • 27
    • 53949095200 scopus 로고    scopus 로고
    • Sequence analysis of the gene coding for the S1 glycoprotein of infectious bronchitis virus (IBV) strains from New Zealand
    • MacFarlane, R., and R. Verma. Sequence analysis of the gene coding for the S1 glycoprotein of infectious bronchitis virus (IBV) strains from New Zealand. Virus Genes 37:251-357. 2008.
    • (2008) Virus Genes , vol.37 , pp. 251-357
    • MacFarlane, R.1    Verma, R.2
  • 28
    • 39249085303 scopus 로고    scopus 로고
    • Avian coronavirus infectious bronchitis attenuated live vaccines undergo selection of subpopulations and mutations following vaccination
    • MacKinley, E. T., D. A. Hilt, and M. W. Jackwood. Avian coronavirus infectious bronchitis attenuated live vaccines undergo selection of subpopulations and mutations following vaccination. Vaccine 26:1274-1284. 2008.
    • (2008) Vaccine , vol.26 , pp. 1274-1284
    • MacKinley, E.T.1    Hilt, D.A.2    Jackwood, M.W.3
  • 29
    • 38849168197 scopus 로고    scopus 로고
    • Infectious bronchitis viruses with a novel genomic organization
    • Mardani, K., A. H. Noormohammadi, J. I. Hooper, and G. F. Browning. Infectious bronchitis viruses with a novel genomic organization. J. Virol. 83:2013-2024. 2008.
    • (2008) J. Virol. , vol.83 , pp. 2013-2024
    • Mardani, K.1    Noormohammadi, A.H.2    Hooper, J.I.3    Browning, G.F.4
  • 31
    • 66049162512 scopus 로고    scopus 로고
    • Broadly targeted multiprobe QPCR for detection of coronaviruses: Coronavirus is common among mallard ducks (Anas platyrhynchos)
    • Muradrasoli, S., N. Mohamed, A. Hornyák, J. Fohlman, B. Olsen, S. Belák, and J. Blomberg. Broadly targeted multiprobe QPCR for detection of coronaviruses: Coronavirus is common among mallard ducks (Anas platyrhynchos). J. Virol. Methods 159:277-287. 2009.
    • (2009) J. Virol. Methods , vol.159 , pp. 277-287
    • Muradrasoli, S.1    Mohamed, N.2    Hornyák, A.3    Fohlman, J.4    Olsen, B.5    Belák, S.6    Blomberg, J.7
  • 32
    • 0141683613 scopus 로고    scopus 로고
    • Establishment of persistent avian infectious bronchitis virus infection in antibody-free and antibody-positive chickens
    • Naqi, S., K. Gay, P. Patalla, S. Mondal, and R. Liu. Establishment of persistent avian infectious bronchitis virus infection in antibody-free and antibody-positive chickens. Avian Dis. 47:594-601. 2003.
    • (2003) Avian Dis. , vol.47 , pp. 594-601
    • Naqi, S.1    Gay, K.2    Patalla, P.3    Mondal, S.4    Liu, R.5
  • 33
    • 23744512885 scopus 로고    scopus 로고
    • Variations in the nucleocapsid protein gene of infectious bronchitis viruses isolated in Korea
    • Park, J. Y., S. I. Pak, H. W. Sung, J. H. Kim, C. S. Song, C. W. Lee, and H. M. Know. Variations in the nucleocapsid protein gene of infectious bronchitis viruses isolated in Korea. Virus Genes 31:153-162. 2005.
    • (2005) Virus Genes , vol.31 , pp. 153-162
    • Park, J.Y.1    Pak, S.I.2    Sung, H.W.3    Kim, J.H.4    Song, C.S.5    Lee, C.W.6    Know, H.M.7
  • 35
    • 33748743544 scopus 로고    scopus 로고
    • Isolation and characterization of a coronavirus from pigeons with pancreatitis
    • Qian, D. H., G. J. Zhu, L. Z. Wu, and G. X. Hua. Isolation and characterization of a coronavirus from pigeons with pancreatitis. Am. J. Vet. Res. 67:1575-1579. 2006.
    • (2006) Am. J. Vet. Res. , vol.67 , pp. 1575-1579
    • Qian, D.H.1    Zhu, G.J.2    Wu, L.Z.3    Hua, G.X.4
  • 36
    • 0141716995 scopus 로고    scopus 로고
    • SARS associated coronavirus has a recombinant polymerase and coronaviruses have a history of host-shifting
    • Rest, J. S., and D. P. Mindell. SARS associated coronavirus has a recombinant polymerase and coronaviruses have a history of host-shifting. Infect. Gen. Evol. 3:219-225. 2003.
    • (2003) Infect. Gen. Evol. , vol.3 , pp. 219-225
    • Rest, J.S.1    Mindell, D.P.2
  • 37
    • 0346995101 scopus 로고    scopus 로고
    • Mosaic evolution of the severe acute respiratory syndrome coronavirus
    • Stavrinides, J., and D. S. Guttman. Mosaic evolution of the severe acute respiratory syndrome coronavirus. J. Virol. 78:76-82. 2004.
    • (2004) J. Virol. , vol.78 , pp. 76-82
    • Stavrinides, J.1    Guttman, D.S.2
  • 38
    • 35949001691 scopus 로고    scopus 로고
    • Massachusetts prototype like coronavirus isolated from wild peafowls is pathogenic to chickens
    • Sun, L., G. Zhang, J. Jing-wei, J. Jiang, J. Fub, T. Renb, W. C. Caob, M. Liao, and W. A. Liu. Massachusetts prototype like coronavirus isolated from wild peafowls is pathogenic to chickens. Virus Res. 130:121-128. 2007.
    • (2007) Virus Res. , vol.130 , pp. 121-128
    • Sun, L.1    Zhang, G.2    Jing-Wei, J.3    Jiang, J.4    Fub, J.5    Renb, T.6    Caob, W.C.7    Liao, M.8    Liu, W.A.9
  • 39
    • 34547781750 scopus 로고    scopus 로고
    • Mega4: Molecular evolutionary genetics analysis (MEGA) software version 4.0
    • Tamura, K., J. Dudley, M. Nei, and S. Kumar. Mega4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol. Biol. Evol. 24:1596-99. 2007.
    • (2007) Mol. Biol. Evol. , vol.24 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 41
    • 0027968068 scopus 로고
    • Clustal W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson, J. D., D. G. Higgins, and T. J. Gibson. Clustal W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 11:4673-4680. 1994.
    • (1994) Nucleic Acids Res. , vol.11 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 43
    • 33745802348 scopus 로고    scopus 로고
    • Evolutionary history of the closely related group 2 coronaviruses: Porcine hemagglutinating encephalo-myelitis virus, bovine coronavirus, and human coronavirus OC43
    • Vijgen, L., E. Keyaerts, P. Lemey, P. Maes, K. V. Reeth, H. Nauwynck, M. Pensaert, and M. V. Ranst. Evolutionary history of the closely related group 2 coronaviruses: porcine hemagglutinating encephalo-myelitis virus, bovine coronavirus, and human coronavirus OC43. J. Virol. 80:7270-74. 2006.
    • (2006) J. Virol. , vol.80 , pp. 7270-7274
    • Vijgen, L.1    Keyaerts, E.2    Lemey, P.3    Maes, P.4    Reeth, K.V.5    Nauwynck, H.6    Pensaert, M.7    Ranst, M.V.8
  • 45
    • 37349114096 scopus 로고    scopus 로고
    • Molecular characterization of infectious bronchitis virus strains isolated from the enteric contents of Brazilian laying hens and broilers
    • Villarreal, L. Y. B., P. E. Brandão, J. L. Chacón, A. B. S. Saidenberg, M. S. Assayag, R. C. Jones, and A. J. P. Ferreira. Molecular characterization of infectious bronchitis virus strains isolated from the enteric contents of Brazilian laying hens and broilers. Avian Dis. 51:974-978. 2007.
    • (2007) Avian Dis. , vol.51 , pp. 974-978
    • Villarreal, L.Y.B.1    Brandão, P.E.2    Chacón, J.L.3    Saidenberg, A.B.S.4    Assayag, M.S.5    Jones, R.C.6    Ferreira, A.J.P.7
  • 46
    • 58149487608 scopus 로고    scopus 로고
    • Comparative analysis of complete genome sequences of three avian coronaviruses reveals a novel group 3c coronavirus
    • Woo, P. C. Y., S. K. P. Lau, C. S. F. Lam, K. K. Y. Lai, Y. Huang, P. Lee, G. S. M. Luk, K. C. Dyrting, K. Chan, and K. Yuen. Comparative analysis of complete genome sequences of three avian coronaviruses reveals a novel group 3c coronavirus. J. Virol. 83:908-917. 2009.
    • (2009) J. Virol. , vol.83 , pp. 908-917
    • Woo, P.C.Y.1    Lau, S.K.P.2    Lam, C.S.F.3    Lai, K.K.Y.4    Huang, Y.5    Lee, P.6    Luk, G.S.M.7    Dyrting, K.C.8    Chan, K.9    Yuen, K.10


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