-
1
-
-
0028978679
-
Development of a 32P-postlabelling method for the analysis of adducts arising through the reaction of acetaldehyde with 2'-deoxyguanosine-3'-monophosphate and DNA
-
Fang J.L., Vaca C.E. Development of a 32P-postlabelling method for the analysis of adducts arising through the reaction of acetaldehyde with 2'-deoxyguanosine-3'-monophosphate and DNA. Carcinogenesis 1995, 16:2177-2185.
-
(1995)
Carcinogenesis
, vol.16
, pp. 2177-2185
-
-
Fang, J.L.1
Vaca, C.E.2
-
2
-
-
0031416803
-
Detection of DNA adducts of acetaldehyde in peripheral white blood cells of alcohol abusers
-
Fang J.L., Vaca C.E. Detection of DNA adducts of acetaldehyde in peripheral white blood cells of alcohol abusers. Carcinogenesis 1997, 18:627-632.
-
(1997)
Carcinogenesis
, vol.18
, pp. 627-632
-
-
Fang, J.L.1
Vaca, C.E.2
-
3
-
-
34247624006
-
Carcinogenicity of alcoholic beverages
-
Baan R., Straif K., Grosse Y., Secretan B., El Ghissassi F., Bouvard V., Altieri A., Cogliano V. Carcinogenicity of alcoholic beverages. Lancet Oncol. 2007, 8:292-293.
-
(2007)
Lancet Oncol.
, vol.8
, pp. 292-293
-
-
Baan, R.1
Straif, K.2
Grosse, Y.3
Secretan, B.4
El Ghissassi, F.5
Bouvard, V.6
Altieri, A.7
Cogliano, V.8
-
4
-
-
0035799253
-
2-ethyl-2'-deoxyguanosine DNA adduct by the exonuclease-free Klenow fragment of Escherichia coli DNA polymerase I
-
2-ethyl-2'-deoxyguanosine DNA adduct by the exonuclease-free Klenow fragment of Escherichia coli DNA polymerase I. Biochemistry 2001, 40:4106-4114.
-
(2001)
Biochemistry
, vol.40
, pp. 4106-4114
-
-
Terashima, I.1
Matsuda, T.2
Fang, T.W.3
Suzuki, N.4
Kobayashi, J.5
Kohda, K.6
Shibutani, S.7
-
5
-
-
34547472124
-
Alcohol metabolism and cancer risk
-
Seitz H.K., Becker P. Alcohol metabolism and cancer risk. Alcohol Res. Health 2007, 30:38-47.
-
(2007)
Alcohol Res. Health
, vol.30
, pp. 38-47
-
-
Seitz, H.K.1
Becker, P.2
-
6
-
-
0345737134
-
2-ethylguanine and the O6-ethyl- and O6-methylguanine lesions in DNA: contrasting responses from the " bypass" DNA polymerase eta and the replicative DNA polymerase alpha
-
2-ethylguanine and the O6-ethyl- and O6-methylguanine lesions in DNA: contrasting responses from the " bypass" DNA polymerase eta and the replicative DNA polymerase alpha. Chem. Res. Toxicol. 2003, 16:1616-1623.
-
(2003)
Chem. Res. Toxicol.
, vol.16
, pp. 1616-1623
-
-
Perrino, F.W.1
Blans, P.2
Harvey, S.3
Gelhaus, S.L.4
McGrath, C.5
Akman, S.A.6
Jenkins, G.S.7
LaCourse, W.R.8
Fishbein, J.C.9
-
7
-
-
2442515307
-
2-alkylguanine DNA adducts on catalytic efficiency and fidelity of the processive DNA polymerases bacteriophage T7 exonuclease- and HIV-1 reverse transcriptase
-
2-alkylguanine DNA adducts on catalytic efficiency and fidelity of the processive DNA polymerases bacteriophage T7 exonuclease- and HIV-1 reverse transcriptase. J. Biol. Chem. 2004, 279:19217-19229.
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 19217-19229
-
-
Choi, J.Y.1
Guengerich, F.P.2
-
10
-
-
33744954680
-
2-guanine DNA adducts by human DNA polymerase iota
-
2-guanine DNA adducts by human DNA polymerase iota. J. Biol. Chem. 2006, 281:12315-12324.
-
(2006)
J. Biol. Chem.
, vol.281
, pp. 12315-12324
-
-
Choi, J.Y.1
Guengerich, F.P.2
-
12
-
-
23944449018
-
2-guanine DNA lesions by human DNA polymerase eta
-
2-guanine DNA lesions by human DNA polymerase eta. J. Mol. Biol. 2005, 352:72-90.
-
(2005)
J. Mol. Biol.
, vol.352
, pp. 72-90
-
-
Choi, J.Y.1
Guengerich, F.P.2
-
13
-
-
69949128706
-
Structural basis of high-fidelity DNA synthesis by yeast DNA polymerase delta
-
Swan M.K., Johnson R.E., Prakash L., Prakash S., Aggarwal A.K. Structural basis of high-fidelity DNA synthesis by yeast DNA polymerase delta. Nat. Struct. Mol. Biol. 2009, 16:979-986.
-
(2009)
Nat. Struct. Mol. Biol.
, vol.16
, pp. 979-986
-
-
Swan, M.K.1
Johnson, R.E.2
Prakash, L.3
Prakash, S.4
Aggarwal, A.K.5
-
14
-
-
0035369086
-
Structure of the replicating complex of a pol alpha family DNA polymerase
-
Franklin M.C., Wang J., Steitz T.A. Structure of the replicating complex of a pol alpha family DNA polymerase. Cell 2001, 105:657-667.
-
(2001)
Cell
, vol.105
, pp. 657-667
-
-
Franklin, M.C.1
Wang, J.2
Steitz, T.A.3
-
15
-
-
0034671730
-
Fidelity and processivity of DNA synthesis by DNA polymerase kappa, the product of the human DINB1 gene
-
Ohashi E., Bebenek K., Matsuda T., Feaver W.J., Gerlach V.L., Friedberg E.C., Ohmori H., Kunkel T.A. Fidelity and processivity of DNA synthesis by DNA polymerase kappa, the product of the human DINB1 gene. J. Biol. Chem. 2000, 275:39678-39684.
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 39678-39684
-
-
Ohashi, E.1
Bebenek, K.2
Matsuda, T.3
Feaver, W.J.4
Gerlach, V.L.5
Friedberg, E.C.6
Ohmori, H.7
Kunkel, T.A.8
-
16
-
-
0035808417
-
Purification and characterization of pol kappa, a DNA polymerase encoded by the human DINB1 gene
-
Gerlach V.L., Feaver W.J., Fischhaber P.L., Friedberg E.C. Purification and characterization of pol kappa, a DNA polymerase encoded by the human DINB1 gene. J. Biol. Chem. 2001, 276:92-98.
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 92-98
-
-
Gerlach, V.L.1
Feaver, W.J.2
Fischhaber, P.L.3
Friedberg, E.C.4
-
17
-
-
0032716109
-
Human and mouse homologs of Escherichia coli DinB (DNA polymerase IV), members of the UmuC/DinB superfamily, Proc
-
Gerlach V.L., Aravind L., Gotway G., Schultz R.A., Koonin E.V., Friedberg E.C. Human and mouse homologs of Escherichia coli DinB (DNA polymerase IV), members of the UmuC/DinB superfamily, Proc. Natl. Acad. Sci. U.S.A. 1999, 96:11922-11927.
-
(1999)
Natl. Acad. Sci. U.S.A.
, vol.96
, pp. 11922-11927
-
-
Gerlach, V.L.1
Aravind, L.2
Gotway, G.3
Schultz, R.A.4
Koonin, E.V.5
Friedberg, E.C.6
-
18
-
-
0034327552
-
Human DNA polymerase kappa synthesizes DNA with extraordinarily low fidelity
-
Zhang Y., Yuan F., Xin H., Wu X., Rajpal D.K., Yang D., Wang Z. Human DNA polymerase kappa synthesizes DNA with extraordinarily low fidelity. Nucleic Acids Res. 2000, 28:4147-4156.
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 4147-4156
-
-
Zhang, Y.1
Yuan, F.2
Xin, H.3
Wu, X.4
Rajpal, D.K.5
Yang, D.6
Wang, Z.7
-
19
-
-
0034327408
-
Error-free and error-prone lesion bypass by human DNA polymerase kappa in vitro
-
Zhang Y., Yuan F., Wu X., Wang M., Rechkoblit O., Taylor J.S., Geacintov N.E., Wang Z. Error-free and error-prone lesion bypass by human DNA polymerase kappa in vitro. Nucleic Acids Res. 2000, 28:4138-4146.
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 4138-4146
-
-
Zhang, Y.1
Yuan, F.2
Wu, X.3
Wang, M.4
Rechkoblit, O.5
Taylor, J.S.6
Geacintov, N.E.7
Wang, Z.8
-
20
-
-
33750470385
-
Human DNA polymerase kappa forms nonproductive complexes with matched primer termini but not with mismatched primer termini
-
Carlson K.D., Johnson R.E., Prakash L., Prakash S., Washington M.T. Human DNA polymerase kappa forms nonproductive complexes with matched primer termini but not with mismatched primer termini. Proc. Natl. Acad. Sci. U.S.A. 2006, 103:15776-15781.
-
(2006)
Proc. Natl. Acad. Sci. U.S.A.
, vol.103
, pp. 15776-15781
-
-
Carlson, K.D.1
Johnson, R.E.2
Prakash, L.3
Prakash, S.4
Washington, M.T.5
-
21
-
-
0037133339
-
Human DINB1-encoded DNA polymerase kappa is a promiscuous extender of mispaired primer termini
-
Washington M.T., Johnson R.E., Prakash L., Prakash S. Human DINB1-encoded DNA polymerase kappa is a promiscuous extender of mispaired primer termini. Proc. Natl. Acad. Sci. U.S.A. 2002, 99:1910-1914.
-
(2002)
Proc. Natl. Acad. Sci. U.S.A.
, vol.99
, pp. 1910-1914
-
-
Washington, M.T.1
Johnson, R.E.2
Prakash, L.3
Prakash, S.4
-
22
-
-
0037058976
-
Role of human DNA polymerase kappa as an extender in translesion synthesis
-
Haracska L., Prakash L., Prakash S. Role of human DNA polymerase kappa as an extender in translesion synthesis. Proc. Natl. Acad. Sci. U.S.A. 2002, 99:16000-16005.
-
(2002)
Proc. Natl. Acad. Sci. U.S.A.
, vol.99
, pp. 16000-16005
-
-
Haracska, L.1
Prakash, L.2
Prakash, S.3
-
23
-
-
0037163036
-
6-dA lesions catalyzed by DNA bypass polymerases
-
6-dA lesions catalyzed by DNA bypass polymerases. J. Biol. Chem. 2002, 277:30488-30494.
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 30488-30494
-
-
Rechkoblit, O.1
Zhang, Y.2
Guo, D.3
Wang, Z.4
Amin, S.5
Krzeminsky, J.6
Louneva, N.7
Geacintov, N.E.8
-
24
-
-
30544445218
-
A single amino acid governs enhanced activity of DinB DNA polymerases on damaged templates
-
Jarosz D.F., Godoy V.G., Delaney J.C., Essigmann J.M., Walker G.C. A single amino acid governs enhanced activity of DinB DNA polymerases on damaged templates. Nature 2006, 439:225-228.
-
(2006)
Nature
, vol.439
, pp. 225-228
-
-
Jarosz, D.F.1
Godoy, V.G.2
Delaney, J.C.3
Essigmann, J.M.4
Walker, G.C.5
-
25
-
-
56649109929
-
The N-clasp of human DNA polymerase kappa promotes blockage or error-free bypass of adenine- or guanine-benzo[a]pyrenyl lesions
-
Jia L., Geacintov N.E., Broyde S. The N-clasp of human DNA polymerase kappa promotes blockage or error-free bypass of adenine- or guanine-benzo[a]pyrenyl lesions. Nucleic Acids Res. 2008, 36:6571-6584.
-
(2008)
Nucleic Acids Res.
, vol.36
, pp. 6571-6584
-
-
Jia, L.1
Geacintov, N.E.2
Broyde, S.3
-
26
-
-
33847208855
-
Human DNA polymerase kappa encircles DNA: implications for mismatch extension and lesion bypass
-
Lone S., Townson S.A., Uljon S.N., Johnson R.E., Brahma A., Nair D.T., Prakash S., Prakash L., Aggarwal A.K. Human DNA polymerase kappa encircles DNA: implications for mismatch extension and lesion bypass. Mol. Cell 2007, 25:601-614.
-
(2007)
Mol. Cell
, vol.25
, pp. 601-614
-
-
Lone, S.1
Townson, S.A.2
Uljon, S.N.3
Johnson, R.E.4
Brahma, A.5
Nair, D.T.6
Prakash, S.7
Prakash, L.8
Aggarwal, A.K.9
-
27
-
-
59649110607
-
Nucleic acid polymerases use a general acid for nucleotidyl transfer
-
Castro C., Smidansky E.D., Arnold J.J., Maksimchuk K.R., Moustafa I., Uchida A., Gotte M., Konigsberg W., Cameron C.E. Nucleic acid polymerases use a general acid for nucleotidyl transfer. Nat. Struct. Mol. Biol. 2009, 16:212-218.
-
(2009)
Nat. Struct. Mol. Biol.
, vol.16
, pp. 212-218
-
-
Castro, C.1
Smidansky, E.D.2
Arnold, J.J.3
Maksimchuk, K.R.4
Moustafa, I.5
Uchida, A.6
Gotte, M.7
Konigsberg, W.8
Cameron, C.E.9
-
28
-
-
0032518374
-
A mechanism for all polymerases
-
Steitz T.A. A mechanism for all polymerases. Nature 1998, 391:231-232.
-
(1998)
Nature
, vol.391
, pp. 231-232
-
-
Steitz, T.A.1
-
32
-
-
34548337284
-
Increased catalytic activity and altered fidelity of human DNA polymerase iota in the presence of manganese
-
Frank E.G., Woodgate R. Increased catalytic activity and altered fidelity of human DNA polymerase iota in the presence of manganese. J. Biol. Chem. 2007, 282:24689-24696.
-
(2007)
J. Biol. Chem.
, vol.282
, pp. 24689-24696
-
-
Frank, E.G.1
Woodgate, R.2
-
33
-
-
0023665197
-
DNA polymerase insertion fidelity. Gel assay for site-specific kinetics
-
Boosalis M.S., Petruska J., Goodman M.F. DNA polymerase insertion fidelity. Gel assay for site-specific kinetics. J. Biol. Chem. 1987, 262:14689-14696.
-
(1987)
J. Biol. Chem.
, vol.262
, pp. 14689-14696
-
-
Boosalis, M.S.1
Petruska, J.2
Goodman, M.F.3
-
34
-
-
0017173641
-
Infidelity of DNA synthesis in vitro: screening for potential metal mutagens or carcinogens
-
Sirover M.A., Loeb L.A. Infidelity of DNA synthesis in vitro: screening for potential metal mutagens or carcinogens. Science 1976, 194:1434-1436.
-
(1976)
Science
, vol.194
, pp. 1434-1436
-
-
Sirover, M.A.1
Loeb, L.A.2
-
35
-
-
0018318912
-
On the fidelity of DNA replication. Effect of divalent metal ion activators and deoxyrionucleoside triphosphate pools on in vitro mutagenesis
-
Kunkel T.A., Loeb L.A. On the fidelity of DNA replication. Effect of divalent metal ion activators and deoxyrionucleoside triphosphate pools on in vitro mutagenesis. J. Biol. Chem. 1979, 254:5718-5725.
-
(1979)
J. Biol. Chem.
, vol.254
, pp. 5718-5725
-
-
Kunkel, T.A.1
Loeb, L.A.2
-
36
-
-
0020562444
-
In vitro bypass of UV-induced lesions by Escherichia coli DNA polymerase I: specificity of nucleotide incorporation
-
Rabkin S.D., Moore P.D., Strauss B.S. In vitro bypass of UV-induced lesions by Escherichia coli DNA polymerase I: specificity of nucleotide incorporation. Proc. Natl. Acad. Sci. U.S.A. 1983, 80:1541-1545.
-
(1983)
Proc. Natl. Acad. Sci. U.S.A.
, vol.80
, pp. 1541-1545
-
-
Rabkin, S.D.1
Moore, P.D.2
Strauss, B.S.3
-
37
-
-
0020619684
-
On the enzymatic basis for mutagenesis by manganese
-
Goodman M.F., Keener S., Guidotti S., Branscomb E.W. On the enzymatic basis for mutagenesis by manganese. J. Biol. Chem. 1983, 258:3469-3475.
-
(1983)
J. Biol. Chem.
, vol.258
, pp. 3469-3475
-
-
Goodman, M.F.1
Keener, S.2
Guidotti, S.3
Branscomb, E.W.4
-
38
-
-
0028916224
-
Rapid quench kinetic analysis of polymerases, adenosinetriphosphatases, and enzyme intermediates
-
Johnson K.A. Rapid quench kinetic analysis of polymerases, adenosinetriphosphatases, and enzyme intermediates. Methods Enzymol. 1995, 249:38-61.
-
(1995)
Methods Enzymol.
, vol.249
, pp. 38-61
-
-
Johnson, K.A.1
-
39
-
-
0026033193
-
Pre-steady-state kinetic analysis of processive DNA replication including complete characterization of an exonuclease-deficient mutant
-
Patel S.S, Wong I., Johnson K.A. Pre-steady-state kinetic analysis of processive DNA replication including complete characterization of an exonuclease-deficient mutant. Biochemistry 1991, 30:511-525.
-
(1991)
Biochemistry
, vol.30
, pp. 511-525
-
-
Patel, S.S.1
Wong, I.2
Johnson, K.A.3
-
40
-
-
70450222118
-
Polk mutant mice have a spontaneous mutator phenotype
-
Stancel J.N., McDaniel L.D., Velasco S., Richardson J., Guo C., Friedberg E.C. Polk mutant mice have a spontaneous mutator phenotype. DNA Repair 2009, 8:1355-1362.
-
(2009)
DNA Repair
, vol.8
, pp. 1355-1362
-
-
Stancel, J.N.1
McDaniel, L.D.2
Velasco, S.3
Richardson, J.4
Guo, C.5
Friedberg, E.C.6
-
41
-
-
2942753954
-
Efficient and error-free replication past a minor-groove DNA adduct by the sequential action of human DNA polymerases iota and kappa
-
Washington M.T., Minko I.G., Johnson R.E., Wolfle W.T., Harris T.M., Lloyd R.S., Prakash S., Prakash L. Efficient and error-free replication past a minor-groove DNA adduct by the sequential action of human DNA polymerases iota and kappa. Mol. Cell. Biol. 2004, 24:5687-5693.
-
(2004)
Mol. Cell. Biol.
, vol.24
, pp. 5687-5693
-
-
Washington, M.T.1
Minko, I.G.2
Johnson, R.E.3
Wolfle, W.T.4
Harris, T.M.5
Lloyd, R.S.6
Prakash, S.7
Prakash, L.8
-
42
-
-
21244506437
-
Eukaryotic translesion synthesis DNA polymerases: specificity of structure and function
-
Prakash S., Johnson R.E., Prakash L. Eukaryotic translesion synthesis DNA polymerases: specificity of structure and function. Annu. Rev. Biochem. 2005, 74:317-353.
-
(2005)
Annu. Rev. Biochem.
, vol.74
, pp. 317-353
-
-
Prakash, S.1
Johnson, R.E.2
Prakash, L.3
-
43
-
-
26444528004
-
Human DNA polymerase iota incorporates dCTP opposite template G via a G.C+Hoogsteen base pair
-
Nair D.T., Johnson R.E., Prakash L., Prakash S., Aggarwal A.K. Human DNA polymerase iota incorporates dCTP opposite template G via a G.C+Hoogsteen base pair. Structure 2005, 13:1569-1577.
-
(2005)
Structure
, vol.13
, pp. 1569-1577
-
-
Nair, D.T.1
Johnson, R.E.2
Prakash, L.3
Prakash, S.4
Aggarwal, A.K.5
-
44
-
-
0037773539
-
Requirement of Watson-Crick hydrogen bonding for DNA synthesis by yeast DNA polymerase eta
-
Washington M.T., Helquist S.A., Kool E.T., Prakash L., Prakash S. Requirement of Watson-Crick hydrogen bonding for DNA synthesis by yeast DNA polymerase eta. Mol. Cell. Biol. 2003, 23:5107-5112.
-
(2003)
Mol. Cell. Biol.
, vol.23
, pp. 5107-5112
-
-
Washington, M.T.1
Helquist, S.A.2
Kool, E.T.3
Prakash, L.4
Prakash, S.5
-
45
-
-
23344450921
-
Evidence for a Watson-Crick hydrogen bonding requirement in DNA synthesis by human DNA polymerase kappa
-
Wolfle W.T., Washington M.T., Kool E.T., Spratt T.E., Helquist S.A., Prakash L., Prakash S. Evidence for a Watson-Crick hydrogen bonding requirement in DNA synthesis by human DNA polymerase kappa. Mol. Cell. Biol. 2005, 25:7137-7143.
-
(2005)
Mol. Cell. Biol.
, vol.25
, pp. 7137-7143
-
-
Wolfle, W.T.1
Washington, M.T.2
Kool, E.T.3
Spratt, T.E.4
Helquist, S.A.5
Prakash, L.6
Prakash, S.7
-
46
-
-
3142674288
-
Replication by human DNA polymerase-iota occurs by Hoogsteen base-pairing
-
Nair D.T., Johnson R.E., Prakash S., Prakash L., Aggarwal A.K. Replication by human DNA polymerase-iota occurs by Hoogsteen base-pairing. Nature 2004, 430:377-380.
-
(2004)
Nature
, vol.430
, pp. 377-380
-
-
Nair, D.T.1
Johnson, R.E.2
Prakash, S.3
Prakash, L.4
Aggarwal, A.K.5
-
48
-
-
33846617351
-
Regulation of magnesium homeostasis and transport in mammalian cells
-
Romani A. Regulation of magnesium homeostasis and transport in mammalian cells. Arch. Biochem. Biophys. 2007, 458:90-102.
-
(2007)
Arch. Biochem. Biophys.
, vol.458
, pp. 90-102
-
-
Romani, A.1
-
49
-
-
0037893024
-
The NRAMP proteins of Salmonella typhimurium and Escherichia coli are selective manganese transporters involved in the response to reactive oxygen
-
Kehres D.G., Zaharik M.L., Finlay B.B., Maguire M.E. The NRAMP proteins of Salmonella typhimurium and Escherichia coli are selective manganese transporters involved in the response to reactive oxygen. Mol. Microbiol. 2000, 36:1085-1100.
-
(2000)
Mol. Microbiol.
, vol.36
, pp. 1085-1100
-
-
Kehres, D.G.1
Zaharik, M.L.2
Finlay, B.B.3
Maguire, M.E.4
|