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Volumn 14, Issue 3, 2010, Pages 559-568

Pharmacophore generation and atom-based 3D-QSAR of novel 2-(4-methylsulfonylphenyl)pyrimidines as COX-2 inhibitors

Author keywords

3D QSAR; COX 2 inhibitor; Docking; Pharmacophore

Indexed keywords

2 (4 METHYLSULFONYLPHENYL)PYRIMIDINE; ARGININE; CYCLOOXYGENASE 2 INHIBITOR; HISTIDINE; PHENYLALANINE; SERINE; TYROSINE; UNCLASSIFIED DRUG; VALINE;

EID: 78650177876     PISSN: 13811991     EISSN: None     Source Type: Journal    
DOI: 10.1007/s11030-009-9183-3     Document Type: Article
Times cited : (56)

References (24)
  • 1
    • 0028044609 scopus 로고
    • Towards a better aspirin
    • DOI 10.1038/367215a0
    • JR Vane 1994 Towards a better aspirin Nature 367 215 216 10.1038/367215a0 1:STN:280:DyaK2c7ms1yksQ%3D%3D 10.1038/367215a0 8121485 (Pubitemid 24051134)
    • (1994) Nature , vol.367 , Issue.6460 , pp. 215-216
    • Vane, J.1
  • 6
    • 17144393290 scopus 로고    scopus 로고
    • Adverse cardiovascular effects of the coxibs
    • DOI 10.1021/jm0402059
    • JM Dogne' CT Supuran D Pratico 2005 Adverse cardiovascular effects of the coxibs J Med Chem 48 2251 2257 10.1021/jm0402059 10.1021/jm0402059 (Pubitemid 40516417)
    • (2005) Journal of Medicinal Chemistry , vol.48 , Issue.7 , pp. 2251-2257
    • Dogne, J.-M.1    Supuran, C.T.2    Pratico, D.3
  • 7
    • 0037307483 scopus 로고    scopus 로고
    • Cyclooxygenase 2: A molecular target for cancer prevention and treatment
    • DOI 10.1016/S0165-6147(02)00043-3, PII S0165614702000433
    • K Subbaramaiah AJ Dannenberg 2003 Cyclooxygenase 2: a molecular target for cancer prevention and treatment Trends Pharmacol Sci 24 96 102 10.1016/S0165-6147(02)00043-3 1:CAS:528:DC%2BD3sXmt1aktA%3D%3D 10.1016/S0165-6147(02)00043-3 12559775 (Pubitemid 36135884)
    • (2003) Trends in Pharmacological Sciences , vol.24 , Issue.2 , pp. 96-102
    • Subbaramaiah, K.1    Dannenberg, A.J.2
  • 9
    • 7244226629 scopus 로고    scopus 로고
    • Non-steroidal anti-inflammatory drugs (NSAIDs) in Alzheimer's disease: Old and new mechanisms of action
    • DOI 10.1111/j.1471-4159.2004.02743.x
    • L Gasparini E Ongini G Wenk 2004 Non-steroidal anti-inflammatory drugs (NSAIDs) in Alzheimer's disease: old and new mechanisms of action J Neurochem 91 521 536 10.1111/j.1471-4159.2004.02743.x 1:CAS:528:DC%2BD2cXpsFelsLo%3D 10.1111/j.1471-4159.2004.02743.x 15485484 (Pubitemid 39431148)
    • (2004) Journal of Neurochemistry , vol.91 , Issue.3 , pp. 521-536
    • Gasparini, L.1    Ongini, E.2    Wenk, G.3
  • 10
    • 0033606951 scopus 로고    scopus 로고
    • 3 receptor antagonists
    • DOI 10.1021/jm980409n
    • DP Marriott IG Dougall P Meghani YJ Liu DR Flower 1999 Lead generation using pharmacophore mapping and three-dimensional database searching: application to muscarinic M(3) receptor antagonists J Med Chem 42 3210 3216 10.1021/jm980409n 1:CAS:528:DyaK1MXkvVCrtL8%3D 10.1021/jm980409n 10464008 (Pubitemid 29409710)
    • (1999) Journal of Medicinal Chemistry , vol.42 , Issue.17 , pp. 3210-3216
    • Marriott, D.P.1    Dougall, I.G.2    Meghani, P.3    Liu, Y.-J.4    Flower, D.R.5
  • 11
    • 0001589603 scopus 로고    scopus 로고
    • Development of pharmacophore alignment models as input for comparative molecular field analysis of a diverse set of azole antifungal agents
    • 10.1021/ci990020o 1:CAS:528:DyaK1MXmtlKqsbY%3D
    • TT Talele SS Kulkarni VM Kulkarni 1999 Development of pharmacophore alignment models as input for comparative molecular field analysis of a diverse set of azole antifungal agents J Chem Inf Comput Sci 39 958 966 10.1021/ci990020o 1:CAS:528:DyaK1MXmtlKqsbY%3D
    • (1999) J Chem Inf Comput Sci , vol.39 , pp. 958-966
    • Talele, T.T.1    Kulkarni, S.S.2    Kulkarni, V.M.3
  • 12
    • 0035246393 scopus 로고    scopus 로고
    • A feature based pharmacophore for Candida albicans MyristoylCoA: Protein N-myristoyltransferase inhibitors
    • DOI 10.1016/S0223-5234(00)01202-2, PII S0223523400012022
    • RG Karki VM Kulkarni 2001 A feature based pharmacophore for Candida albicans MyristoylCoA: protein N-myristoyltransferase inhibitors Eur J Med Chem 36 147 163 10.1016/S0223-5234(00)01202-2 1:CAS:528:DC%2BD3MXjtF2gtLo%3D 10.1016/S0223-5234(00)01202-2 11311746 (Pubitemid 32304517)
    • (2001) European Journal of Medicinal Chemistry , vol.36 , Issue.2 , pp. 147-163
    • Karki, R.G.1    Kulkarni, V.M.2
  • 13
    • 0030599010 scopus 로고    scopus 로고
    • A fast flexible docking method using an incremental construction algorithm
    • DOI 10.1006/jmbi.1996.0477
    • M Rarey B Kramer T Lengauer GA Klebe 1996 A fast flexible docking method using an incremental construction algorithm J Mol Biol 261 470 489 10.1006/jmbi.1996.0477 1:CAS:528:DyaK28XltlKisLo%3D 10.1006/jmbi.1996.0477 8780787 (Pubitemid 26335901)
    • (1996) Journal of Molecular Biology , vol.261 , Issue.3 , pp. 470-489
    • Rarey, M.1    Kramer, B.2    Lengauer, T.3    Klebe, G.4
  • 14
    • 78650170757 scopus 로고    scopus 로고
    • Phase, version 3.0, Schrödinger, LLC, New York, USA
    • Phase, version 3.0, Schrödinger, LLC, New York, USA
  • 15
    • 33845868822 scopus 로고    scopus 로고
    • PHASE: A new engine for pharmacophore perception, 3D QSAR model development, and 3D database screening: 1. Methodology and preliminary results
    • DOI 10.1007/s10822-006-9087-6
    • SL Dixon AM Smondyrev EH Knoll SN Rao DE Shaw RA Friesner 2006 PHASE: a new engine for pharmacophore perception, 3D QSAR model development, and 3D database screening: 1. Methodology and preliminary results J Comput Aided Mol Des 20 647 671 10.1007/s10822-006-9087-6 1:CAS:528:DC%2BD28XhtlCksbvE 10.1007/s10822-006-9087-6 17124629 (Pubitemid 46023928)
    • (2006) Journal of Computer-Aided Molecular Design , vol.20 , Issue.10-11 , pp. 647-671
    • Dixon, S.L.1    Smondyrev, A.M.2    Knoll, E.H.3    Rao, S.N.4    Shaw, D.E.5    Friesner, R.A.6
  • 16
    • 40749135792 scopus 로고    scopus 로고
    • Novel 2-(4-methylsulfonylphenyl)pyrimidine derivatives as highly potent and specific COX-2 inhibitors
    • DOI 10.1016/j.bmc.2007.11.079, PII S0968089607010474
    • A Orjales R Mosquera B Lopez R Oliver L Labeaga MT Nunez 2008 Novel 2-(4-methylsulfonylphenyl)pyrimidine derivatives as highly potent and specific COX-2 inhibitors Bioorg Med Chem 16 2183 2199 10.1016/j.bmc.2007.11.079 1:CAS:528:DC%2BD1cXjtl2mtLY%3D 10.1016/j.bmc.2007.11.079 18158247 (Pubitemid 351380955)
    • (2008) Bioorganic and Medicinal Chemistry , vol.16 , Issue.5 , pp. 2183-2199
    • Orjales, A.1    Mosquera, R.2    Lopez, B.3    Olivera, R.4    Labeaga, L.5    Nunez, M.T.6
  • 17
    • 0042355453 scopus 로고    scopus 로고
    • Rational selection of training and test sets for the development of validated QSAR models
    • DOI 10.1023/A:1025386326946
    • A Golbraikh M Shen Z Xiao Y-D Xiao K-H Lee A Tropsha 2003 Rational selection of training and test sets for the development of validated QSAR models J Comput Aided Mol Des 17 241 253 10.1023/A:1025386326946 1:CAS:528: DC%2BD3sXmsVGnsL0%3D 10.1023/A:1025386326946 13677490 (Pubitemid 37062785)
    • (2003) Journal of Computer-Aided Molecular Design , vol.17 , Issue.2-4 , pp. 241-253
    • Golbraikh, A.1    Shen, M.2    Xiao, Z.3    Xiao, Y.-D.4    Lee, K.-H.5    Tropsha, A.6
  • 18
    • 78650177944 scopus 로고    scopus 로고
    • Maestro, version 8.5, Schrödinger, LLC, New York, USA
    • Maestro, version 8.5, Schrödinger, LLC, New York, USA
  • 19
    • 0029912748 scopus 로고    scopus 로고
    • Development and testing of the OPLS all-atom force field on conformational energetics and properties of organic liquids
    • DOI 10.1021/ja9621760, PII S0002786396021762
    • WL Jorgensen DS Maxwell J Tirado-Rives 1996 Development and testing of the OPLS all-atom force field on conformational energetics and properties of organic liquids J Am Chem Soc 118 11225 11236 10.1021/ja9621760 1:CAS:528:DyaK28XmtlOitrs%3D 10.1021/ja9621760 (Pubitemid 26399746)
    • (1996) Journal of the American Chemical Society , vol.118 , Issue.45 , pp. 11225-11236
    • Jorgensen, W.L.1    Maxwell, D.S.2    Tirado-Rives, J.3
  • 20
    • 0043162336 scopus 로고
    • An internal-coordinate Monte Carlo method for searching conformational space
    • 10.1021/ja00194a035 1:CAS:528:DyaL1MXitlSrsLo%3D 10.1021/ja00194a035
    • G Chang WC Guida WC Still 1989 An internal-coordinate Monte Carlo method for searching conformational space J Am Chem Soc 111 4379 4386 10.1021/ja00194a035 1:CAS:528:DyaL1MXitlSrsLo%3D 10.1021/ja00194a035
    • (1989) J Am Chem Soc , vol.111 , pp. 4379-4386
    • Chang, G.1    Guida, W.C.2    Still, W.C.3
  • 21
    • 0142236572 scopus 로고    scopus 로고
    • Low mode search. An efficient, automated computational method for conformational analysis: Application to cyclic and acyclic alkanes and cyclic peptides
    • DOI 10.1021/ja952478m
    • I Kolossvary WC Guida 1996 Low mode search: an efficient, automated computational method for conformational analysis-application to cyclic and acyclic alkanes and cyclic peptides J Am Chem Soc 118 5011 5019 10.1021/ja952478m 1:CAS:528:DyaK28XivVyitLs%3D 10.1021/ja952478m (Pubitemid 26200976)
    • (1996) Journal of the American Chemical Society , vol.118 , Issue.21 , pp. 5011-5019
    • Kolossvary, I.1    Guida, W.C.2
  • 22
    • 78650178995 scopus 로고    scopus 로고
    • Glide, version 5.0, Schrödinger, LLC, New York, USA
    • Glide, version 5.0, Schrödinger, LLC, New York, USA
  • 24
    • 1642310340 scopus 로고    scopus 로고
    • Glide: A New Approach for Rapid, Accurate Docking and Scoring. 2. Enrichment Factors in Database Screening
    • DOI 10.1021/jm030644s
    • TA Halgren RB Murphy RA Friesner HS Beard LL Frye WT Pollard JL Banks 2004 Glide: a new approach for rapid, accurate docking and scoring. 2. Enrichment factors in database screening J Med Chem 47 1750 1759 10.1021/jm030644s 1:CAS:528:DC%2BD2cXhsFyit78%3D 10.1021/jm030644s 15027866 (Pubitemid 38380918)
    • (2004) Journal of Medicinal Chemistry , vol.47 , Issue.7 , pp. 1750-1759
    • Halgren, T.A.1    Murphy, R.B.2    Friesner, R.A.3    Beard, H.S.4    Frye, L.L.5    Pollard, W.T.6    Banks, J.L.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.