Biodegradation of isoproturon using a novel Pseudomonas aeruginosa strain JS-11 as a multi-functional bioinoculant of environmental significance

Journal of Hazardous Materials

Volumn 185, Issue 2-3, 2011, Pages 938-944

  Dwivedi, Sourabh ^a,b   Singh, Braj Raj ^a   Al Khedhairy, Abdulaziz A ^a   Musarrat, Javed ^a,b  

^a KING SAUD UNIVERSITY   (Saudi Arabia)

^b ALIGARH MUSLIM UNIVERSITY   (India)

Author keywords

16SrDNA; Biodegradation; Indole acetic acid; Isoproturon; Phosphate solubilization

Indexed keywords

16SRDNA; AGRICULTURAL SOILS; AMBIENT TEMPERATURES; ANTI-FUNGAL ACTIVITY; BACTERIAL STRAINS; BIOLOGICAL ACTIVITIES; CELL DENSITY; DISEASE MANAGEMENT; ENVIRONMENTAL SIGNIFICANCE; FIRST-ORDER RATES; FUSARIUM OXYSPORUMS; HYDROGEN CYANIDE; INDOLEACETIC ACID; ISOPROTURON; MOLECULAR CHARACTERIZATION; MULTI-FUNCTIONAL; P.AERUGINOSA; PHENYLUREA HERBICIDES; PHOSPHATE SOLUBILIZATION; PHYTOPATHOGENS; PLANT GROWTH; PSEUDOMONAS AERUGINOSA; SEQUENCE HOMOLOGY; SIDEROPHORES; SOIL MICROCOSMS; STATIONARY PHASE; TIME-DEPENDENT; TRI-CALCIUM PHOSPHATES;

ACETIC ACID; AMINO ACIDS; BACTERIA; BACTERIOLOGY; BIOREMEDIATION; CALCIUM PHOSPHATE; CYANIDES; DEGRADATION; HERBICIDES; METAL ANALYSIS; PH; RATE CONSTANTS; SOILS; SOLUBILITY; WEED CONTROL;

BIODEGRADATION;

CALCIUM PHOSPHATE; HYDROGEN CYANIDE; ISOPROTURON;

AGRICULTURAL SOIL; ANTIMICROBIAL ACTIVITY; BACTERIUM; BIODEGRADATION; BIOREMEDIATION; FUNGUS; GROWTH RATE; HERBICIDE; HOMOLOGY; INOCULATION; MICROBIAL ACTIVITY; MICROCOSM; MOLECULAR ANALYSIS; PHOSPHATE; REACTION KINETICS; RHIZOSPHERE; SOIL POLLUTION; SOLUBILIZATION; TEMPERATURE EFFECT; WHEAT;

ANTIFUNGAL ACTIVITY; ARTICLE; BIODEGRADATION; CONTROLLED STUDY; ENVIRONMENTAL TEMPERATURE; FLOW KINETICS; FUSARIUM OXYSPORUM; INOCULATION; NONHUMAN; NUCLEOTIDE SEQUENCE; PSEUDOMONAS AERUGINOSA; SOLUBILIZATION;

BIODEGRADATION, ENVIRONMENTAL; HERBICIDES; KINETICS; PHENYLUREA COMPOUNDS; PSEUDOMONAS AERUGINOSA;

BACTERIA (MICROORGANISMS); FUSARIUM OXYSPORUM; PSEUDOMONAS AERUGINOSA; TRITICUM AESTIVUM;

EID: 78649922218     PISSN: 03043894     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jhazmat.2010.09.110     Document Type: Article

References (52)

1. Mackay D., Shiu W.Y., Ma K.C. Pesticides. Illustrated Handbook of Physical-Chemical Properties and Environmental Fate for Organic Chemicals 1997, vol. 5. CRC Press, Boca Raton, FL.
2. Muller K., Bach M., Hartmann H., Spiteller M., Frede H.G. Point- and nonpoint-source pesticide contamination in the Zwester Ohm catchment, Germany. J. Environ. Qual. 2002, 31:309-318.
3. Mansour M., Feicht E.A., Behechti A., Schramm K.W., Kettrup A. Determination photostability of selected agrochemicals in water and soil. Chemosphere 1999, 39:575-585.
4. Vallotton N., Eggen R.I.L., Chevre N. Effect of sequential isoproturon pulse exposure on Scenedesmus vacuolatus. Arch. Environ. Contam. Toxicol. 2009, 56:442-449.
5. Widenfalk A., Bertilsson S., Sundh I., Goedkoop W. Effects of pesticides on community composition and activity of sediment microbes - responses at various levels of microbial community organization. Environ. Pollut. 2008, 152:576-584.
6. Chauhan L.K.S., Saxena P.N., Sundararaman V., Gupta S.K. Diuron-induced cytological and ultrastructural alterations in the root meristem cells of Allium cepa. Pestic. Biochem. Physiol. 1998, 62:152-163.
7. Behera B.C., Bhunya S.P. Genotoxic effect of isoproturon (herbicide) as revealed by three mammalian in vivo mutagenic bioassays. Indian J. Exp. Biol. 1990, 28:862-867.
8. Hoshiya T., Hasegawa R., Hakoi K., Cui L., Ogiso T., Cabral R., Ito N. Enhancement by non-mutagenic pesticides of GST-P positive hepatic foci development initiated with diethylnitrosamine in the rat. Cancer Lett. 1993, 72:59-64.
9. Cox L., Walker A., Welch S.J. Evidence for the accelerated degradation of isoproturon in soils. Pestic. Sci. 1996, 48:253-260.
10. Sørensen S.R., Ronen Z., Aamand J. Isolation from agricultural soil and characterization of a Sphingomonas sp. able to mineralize the phenylurea herbicide isoproturon. Appl. Environ. Microbiol. 2001, 67:5403-5409.
11. Tixier C., Sancelme M., Ait-Aissa S., Widehem P., Bonnemoy F., Cuer A., Truffaut N., Veschambre H. Biotransformation of phenylurea herbicides by a soil bacterial strain, Arthrobacter sp. N2: structure, ecotoxicity and fate of diuron metabolite with soil fungi. Chemosphere 2002, 46:519-526.
12. Bending G.D, Lincoln S.D., Sørensen S.R., Morgan J.A.W., Aamand J., Walker A. In-field spatial variability in the degradation of the phenyl-urea herbicide isoproturon is the result of interactions between degradative Sphingomonas spp. and soil pH. Appl. Environ. Microbiol. 2003, 69:827-834.
13. El-Sebai T., Lagacherie B., Soulas G., Martin-Laurent F. Isolation and characterisation of an isoproturon-mineralising Methylopila sp. TES from French agricultural soil. FEMS Microbiol. Lett. 2004, 239:103-110.
14. Sun J.Q., Huang X., Chen Q.L., Liang B., Qiu J.G., Ali S.W., Li S.P. Isolation and characterization of three Sphingobium sp. strains capable of degrading isoproturon and cloning of the catechol 1,2-dioxygenase gene from these strains. World J. Microbiol. Biotechnol. 2009, 25:259-268.
15. Sørensen S.R., Ronen Z., Aamand J. Growth in coculture stimulates metabolism of the phenylurea herbicide isoproturon by Sphingomonas sp. strain SRS2. Appl. Environ. Microbiol. 2002, 68:3478-3485.
16. Udikovic-Kolic N., Martin-Laurent F., Devers M., Petric I., Begonja-Kolar A., Hrsak D. Genetic potential, diversity and activity of an atrazine-degrading community enriched from a herbicide factory effluent. J. Appl. Microbiol. 2008, 105:1334-1343.
17. Sethunathan N. Biodegradation of diazinon in paddy field as a cause of loss of its efficiency for controlling brown planthoppers in rice fields. Pest Articles News Summ. 1971, 17:18-19.
18. Gibson D.T., Subranian V. Microbial degradation of aromatic hydrocarbons. Microbial Degradation of Organic Compounds 1984, 181-252. Marcel Dekker Inc., New York. D.T. Gibson (Ed.).
19. Ahmadzadeh M., Tehrani A.S. Evaluation of fluorescent pseudomonads for plant growth promotion, antifungal activity against Rhizoctonia solani on common bean and biocontrol potential. Biol. Control 2009, 48:101-107.
20. Thomashow L.S., Weller D.M., Bonsall R.F., Pierson L.S. Production of the antibiotic phenazine-1-carboxylic acid by fluorescent Pseudomonas in the rhizosphere of wheat. Appl. Environ. Microbiol. 1990, 56:908-912.
21. Ellis R.J., Timms-Wilson T.M., Bailey M.J. Identification of conserved traits in fluorescent pseudomonads with antifungal activity. Environ. Microbiol. 2000, 2:274-284.
22. Bano N., Musarrat J. Isolation and characterization of phorate degrading soil bacteria of environmental and agronomic significance. Lett. Appl. Microbiol. 2003, 36:349-353.
23. Bano N., Musarrat J. Characterization of a novel carbofuran degrading Pseudomonas sp. with collateral biocontrol and plant growth promoting potential. FEMS Microbiol. Lett. 2004, 231:13-17.
24. Krieg N.R., Holt J.G. Bergey's Manual of Systematic Bacteriology 1984, Williams and Wilkins, Baltimore.
25. Smibert R.M., Krieg W.R. Phenotypic characterization. Methods for General and Molecular Bacteriology 1994, 607-654. American Society for Microbiology, Washington, DC. P. Gerhardt, R.G.E. Murray, W.A. Wood, N.R. Krieg (Eds.).
26. Singh B.R., Aminuddin, Al-Khedhairy A.A., Fahad A.Q., Musarrat J. Molecular diagnostics and phylogenetic analysis of 'Candidatus phytoplasma asteris' (16SrI-aster yellow group) infecting banana (Musa spp.). Afr. J. Biotechnol. 2009, 8:5819-5824.
27. Sambrook J., Fritsch F.E., Maniatis T.A. Molecular Cloning: A Laboratory Manual 1989, Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York. second ed.
28. Weisburg W.G., Barns S.M., Pelletier D.A., Lane D.J. 16S ribosomal DNA amplification for phylogenetic study. J. Bacteriol. 1991, 173:697-703.
29. Kimura M. A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J. Mol. Evol. 1980, 16:111-120.
30. Dwivedi S., Singh B.R., Al-Khedhairy A.A., Alarifi S., Musarrat J. Isolation and characterization of butachlor-catabolizing bacterial strain Stenotrophomonas acidaminiphila JS-1 from soil and assessment of its biodegradation potential. Lett. Appl. Microbiol. 2010, 51:54-60.
31. Bric J.M., Bostock R.M., Silverstone S.E. Rapid in situ assay for indole acetic acid production by bacteria immobilized on a nitrocellulose membrane. Appl. Environ. Microbiol. 1991, 57:535-538.
32. King J.E. The colorimetric determination of phosphorus. Biochem. J. 1932, 26:292-295.
33. Schwyn B., Neiland J.B. Universal chemical assay for the detection and determination of siderophores. Anal. Biochem. 1987, 160:47-56.
34. Meyer J.M., Abdallah M.A. The fluorescent pigment of Pseudomonas fluorescens: biosynthesis, purification and physicochemical properties. J. Gen. Microbiol. 1978, 107:319-328.
35. Lorck H. Production of hydrocyanic acid by bacteria. Physiol. Plant 1948, 1:142-146.
36. Chineau C.H., Morel J.L., Oudot J. Biodegradation of fuel oil hydrocarbons in the rhizosphere of maize. J. Environ. Qual. 2000, 29:569-578.
37. Berger B.M. Factors influencing transformation rates and formation of products of phenylurea herbicides in soil. J. Agr. Food Chem. 1999, 47:3389-3396.
38. Juhler R.K., Sørensen S.R., Larsen L. Analysing transformation products of herbicide residues in environmental samples. Water Res. 2001, 35:1371-1378.
39. Hussain S., Sørensen S.R., Devers-Lamrani M., El-Sebai T., Martin-Laurent F. Characterization of an isoproturon mineralizing bacterial culture enriched from a French agricultural soil. Chemosphere 2009, 77:1052-1059.
40. Sørensen S.R., Bending G.D., Jacobsen C.S., Walker A., Aamand J. Microbial degradation of isoproturon and related phenylurea herbicides in and below agricultural fields. FEMS Microb. Ecol. 2003, 45:1-11.
41. Zaidi S., Usmani S., Singh B.R., Musarrat J. Significance of Bacillus subtilis strain SJ-101 as a bioinoculant for concurrent plant growth promotion and nickel accumulation in Brassica juncea. Chemosphere 2006, 64:991-997.
42. Garcia de Salamone I.E., Hynes R.K., Nelson L.N. Cytokinin production by plant growth promoting rhizobacteria and selected mutants. Can. J. Microbiol. 2001, 47:103-113.
43. Oberhänsli T., Défago G., Haas D. Indole-3- acetic acid (IAA) synthesis in the biocontrol strain CHAD of Pseudomonas fluorescens: role of tryptophan side chain oxidase. J. Gen. Microbiol. 1991, 137:2273-2279.
44. Barbieri P., Zanella T., Galli E., Zanetti G. Wheat inoculation with Azospirillum brasilense and some mutants altered in nitrogen fixation and indole acetic acid production. FEMS Microbiol. Lett. 1986, 36:87-90.
45. Madhaiyan M., Poonguzhalia S., Harib K., Saravananc V.S., Saa T. Influence of pesticides on the growth rate and plant-growth promoting traits of Gluconacetobacter diazotrophicus. Pest. Biochem. Physiol. 2006, 84:143-154.
46. Ahemad M., Khan M.S. Phosphate-solubilizing plant-growth-promoting Pseudomonas aeruginosa PS1 improves green gram performance in quizalafop-p-ethyl and clodinafop amended soil. Arch. Environ. Contam. Toxicol. 2010, 58:361-372.
47. Donner S.C., Jones D.A., Mcclure N.C., Rosewarne G.M., Tate T.E., Kerr A., Fajardo N.N., Clare B.G. Agrocin 434, a new plasmid encoded argocin from the biocontrol Agrobacterium strains K84 and K1026 which inhibit biovar 2 agrobacteria. Physiol. Mol. Plant Pathol. 1993, 42:185-194.
48. Gaur A.C., Gaind S. Microbial solubilization of phosphates with particular reference to iron and aluminium phosphate. Sci. Cult. 1983, 49:110-112.
49. Voulhoux R., Filloux A., Schalk I.J. Pyoverdine-mediated iron uptake in Pseudomonas aeruginosa: the Tat system is required for PvdN but not for FpvA transport. J. Bacteriol. 2006, 188:3317-3323.
50. Castric P.A. Hydrogen cyanide a secondary metabolite of Pseudomonas aeruginosa. Can. J. Microbiol. 1975, 21:613-618.
51. Brimecombe M.J., De Liej F.A., Lynch J.M. The effect of root exudates on rhizosphere microbial populations. The Rhizosphere 2001, 95-140. Marcel Dekker, New York. R. Pinton, Z. Varanini, P. Nannipieri (Eds.).
52. Ferguson D.A., Cahill O.J., Quilty B. Phenotypic, molecular and antibiotic resistance profiling of nosocomial Pseudomonas aeruginosa strains isolated from two Irish hospitals. J. Med. 2007, 7.