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Volumn 8, Issue 21, 2009, Pages 5819-5824

Molecular diagnostics and phylogenetic analysis of 'Candidatus phytoplasma asteris' (16SrI- Aster yellow group) infecting banana (Musa spp.)

Author keywords

16SrDNA; Banana; Cloning; Phylogenetic analysis; Phytoplasma; Polymerase chain reaction

Indexed keywords

DNA FRAGMENT; PLANT DNA; PLANT RNA; PLASMID VECTOR; RNA 16S;

EID: 71649087377     PISSN: None     EISSN: 16845315     Source Type: Journal    
DOI: 10.5897/ajb09.1046     Document Type: Article
Times cited : (8)

References (21)
  • 1
    • 0001314701 scopus 로고
    • Detection of DNA of plant pathogenic mycoplasma like organism by a polymerase chain reaction that amplifies a sequence of the 16S Rrna Gene
    • Ahrens U, Seemüller E (1992). Detection of DNA of plant pathogenic mycoplasma like organism by a polymerase chain reaction that amplifies a sequence of the 16S Rrna Gene. Phytopathol. 82: 828-832.
    • (1992) Phytopathol. , vol.82 , pp. 828-832
    • Ahrens, U.1    Seemüller, E.2
  • 3
    • 0018800089 scopus 로고
    • A rapid alkaline lysis procedure for screening recombinant plasmid DNA
    • Bimboim HC, Doly J (1979). A rapid alkaline lysis procedure for screening recombinant plasmid DNA. Nucleic Acids Res. 7: 1513-1522.
    • (1979) Nucleic Acids Res. , vol.7 , pp. 1513-1522
    • Bimboim, H.C.1    Doly, J.2
  • 4
    • 0023079507 scopus 로고
    • Banana bunchy top: An economically important tropical plant virus disease
    • Dale JL (1987). Banana bunchy top: an economically important tropical plant virus disease. Adv. Virus Res. 33: 301-325.
    • (1987) Adv. Virus Res. , vol.33 , pp. 301-325
    • Dale, J.L.1
  • 5
    • 0025902153 scopus 로고
    • Amplification of 16S rRNA genes from culturable and nonculturable mollicutes
    • Deng S, Hiruki D (1991). Amplification of 16S rRNA genes from culturable and nonculturable mollicutes. J. Microbiol. Meth. 14: 53-61.
    • (1991) J. Microbiol. Meth. , vol.14 , pp. 53-61
    • Deng, S.1    Hiruki, D.2
  • 6
    • 0020793569 scopus 로고
    • A technique of radiolabelling DNA restriction fragments to high specific activity
    • Fienberg AP, Vogelstein B (1983). A technique of radiolabelling DNA restriction fragments to high specific activity. Anal. Biochem. 132: 6-13.
    • (1983) Anal. Biochem. , vol.132 , pp. 6-13
    • Fienberg, A.P.1    Vogelstein, B.2
  • 7
    • 39649114998 scopus 로고    scopus 로고
    • Biohardening with plant growth promoting rhizosphere and endophytic bacteria induces systemic resistance against Banana bunchy top virus
    • Harish S, Kavino M, Kumar N, Saravanakumar D, Soorianathasundaram K, Samiyappan R (2008). Biohardening with plant growth promoting rhizosphere and endophytic bacteria induces systemic resistance against Banana bunchy top virus. Appl. Soil Ecol. 39: 187-200.
    • (2008) Appl. Soil Ecol. , vol.39 , pp. 187-200
    • Harish, S.1    Kavino, M.2    Kumar, N.3    Saravanakumar, D.4    Soorianathasundaram, K.5    Samiyappan, R.6
  • 8
    • 0038138059 scopus 로고    scopus 로고
    • Characterization of phytoplasmas detected in Chinaberry trees with symptoms of leaf yellowing and decline in Bolivia
    • DOI 10.1046/j.1365-3059.2003.00818.x
    • Harrison NA, Boa E, Carpio ML (2003). Characterization of phytoplasmas detected in Chinaberry trees with symptoms of leaf yellowing and decline in Bolivia. Plant Pathol. 52: 147-157. http://www.croptrust/org/main (Pubitemid 36524575)
    • (2003) Plant Pathology , vol.52 , Issue.2 , pp. 147-157
    • Harrison, N.A.1    Boa, E.2    Carpio, M.L.3
  • 10
    • 71649087586 scopus 로고    scopus 로고
    • First report of molecular identification of 'Candidatus Phytoplasma asteris' affecting Sesame (Sesamum indicum) cultivation in India
    • Khan MS, Raj SK, Snehi SK (2007). First report of molecular identification of 'Candidatus Phytoplasma asteris' affecting Sesame (Sesamum indicum) cultivation in India. Plant Pathol. (New Disease Reports) 89: 291-295.
    • (2007) Plant Pathol. (New Disease Reports) , vol.89 , pp. 291-295
    • Khan, M.S.1    Raj, S.K.2    Snehi, S.K.3
  • 11
    • 33750961764 scopus 로고    scopus 로고
    • First report of molecular detection of an Aster yellows phytoplasma isolate infecting chilli (Capsicum annuum) in India
    • Khan MS, Raj SK (2006). First report of molecular detection of an Aster yellows phytoplasma isolate infecting chilli (Capsicum annuum) in India. Plant Pathol. (New Disease Reports) 55: p. 822.
    • (2006) Plant Pathol. (New Disease Reports) , vol.55 , pp. 822
    • Khan, M.S.1    Raj, S.K.2
  • 12
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
    • Kimura M (1980). A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J. Mol. Evol. 16: 111-120.
    • (1980) J. Mol. Evol. , vol.16 , pp. 111-120
    • Kimura, M.1
  • 13
    • 0031723762 scopus 로고    scopus 로고
    • Revised classification scheme of phytoplasmas based on RFLP analyses of 16S rRNA and ribosomal protein gene sequences
    • Lee LM, Gundersen-Rindall DE, Davis RE, Bartoszyk M (1998). Revised classification scheme of phytoplasmas based on RFLP analyses of 16S rRNA and ribosomal protein gene sequences. Int. J. Syst. Bacteriol. 48: 1153-1169.
    • (1998) Int. J. Syst. Bacteriol. , vol.48 , pp. 1153-1169
    • Lee, L.M.1    Gundersen-Rindall, D.E.2    Davis, R.E.3    Bartoszyk, M.4
  • 14
    • 3242718012 scopus 로고    scopus 로고
    • Amplification of phytoplasma 16S rDNA from banana bunchy top disease, RFLP and sequence analysis of 16S rDNA fragment
    • Li H, Qiu B, Li L, Shi C (1999). Amplification of phytoplasma 16S rDNA from banana bunchy top disease, RFLP and sequence analysis of 16S rDNA fragment. Acta Microbiol. Sinica. 39: 315-320.
    • (1999) Acta Microbiol. Sinica. , vol.39 , pp. 315-320
    • Li, H.1    Qiu, B.2    Li, L.3    Shi, C.4
  • 15
    • 0010090363 scopus 로고
    • Transmission studies on banana bunchy top virus
    • Magee CJP (1940). Transmission studies on banana bunchy top virus. J. Aust. Inst. Agric. Sci. 6: 109-110
    • (1940) J. Aust. Inst. Agric. Sci. , vol.6 , pp. 109-110
    • Magee, C.J.P.1
  • 17
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou N, Nei M (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4: 406-425.
    • (1987) Mol. Biol. Evol. , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 19
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson JD, Higgins DG, Gibson TJ (1994). CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22: 4673-4680.
    • (1994) Nucleic Acids Res. , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 20
    • 0029096263 scopus 로고
    • Detection of DNA and RNA plant viruses by PCR and RT-PCR using a rapid virus release protocol without tissue homogenization
    • Thomson D, Dietzgen RG (1995). Detection of DNA and RNA plant viruses by PCR and RT-PCR using a rapid virus release protocol without tissue homogenization. J. Virol. Methods, 54: 85-95.
    • (1995) J. Virol. Methods , vol.54 , pp. 85-95
    • Thomson, D.1    Dietzgen, R.G.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.