메뉴 건너뛰기




Volumn 105, Issue 5, 2008, Pages 1334-1343

Genetic potential, diversity and activity of an atrazine-degrading community enriched from a herbicide factory effluent

Author keywords

Atrazine; atz; Bacterial community; Biodegradation; Quantitative PCR; trz; Wastewater

Indexed keywords

BACTERIA; BIODEGRADATION; EFFLUENTS; GENES; POLYMERASE CHAIN REACTION; WEED CONTROL;

EID: 54049086578     PISSN: 13645072     EISSN: 13652672     Source Type: Journal    
DOI: 10.1111/j.1365-2672.2008.03890.x     Document Type: Article
Times cited : (22)

References (42)
  • 1
    • 15244340776 scopus 로고    scopus 로고
    • Characterization of Arthrobacter nicotinovorans HIM, an atrazine-degrading bacterium, from agricultural soil New Zealand
    • Aislabie, J., Bej, A.K., Ryburn, J., Lloyd, N. Wilkins, A. (2005) Characterization of Arthrobacter nicotinovorans HIM, an atrazine-degrading bacterium, from agricultural soil New Zealand. FEMS Microbiol Ecol 52, 279 286.
    • (2005) FEMS Microbiol Ecol , vol.52 , pp. 279-286
    • Aislabie, J.1    Bej, A.K.2    Ryburn, J.3    Lloyd, N.4    Wilkins, A.5
  • 3
    • 0030251156 scopus 로고    scopus 로고
    • Rapid mineralisation of s-triazine ring of atrazine in soils in relation to soil management
    • Barriuso, E. Houot, S. (1996) Rapid mineralisation of s-triazine ring of atrazine in soils in relation to soil management. Soil Biol Biochem 28, 1341 1348.
    • (1996) Soil Biol Biochem , vol.28 , pp. 1341-1348
    • Barriuso, E.1    Houot, S.2
  • 4
    • 0037734091 scopus 로고    scopus 로고
    • Isolation and characterization of an atrazine-degrading bacterium from industrial wastewater in China
    • Cai, B., Han, Y., Liu, B., Ren, Y. Jiang, S. (2003) Isolation and characterization of an atrazine-degrading bacterium from industrial wastewater in China. Lett Appl Microbiol 36, 272 276.
    • (2003) Lett Appl Microbiol , vol.36 , pp. 272-276
    • Cai, B.1    Han, Y.2    Liu, B.3    Ren, Y.4    Jiang, S.5
  • 5
    • 0347990402 scopus 로고    scopus 로고
    • Real-time reverse transcription PCR analysis of expression of atrazine catabolism genes in two bacterial strains isolated from soil
    • Devers, M., Soulas, G. Martin-Laurent, F. (2004) Real-time reverse transcription PCR analysis of expression of atrazine catabolism genes in two bacterial strains isolated from soil. J Microbiol Methods 56, 3 15.
    • (2004) J Microbiol Methods , vol.56 , pp. 3-15
    • Devers, M.1    Soulas, G.2    Martin-Laurent, F.3
  • 6
    • 24744442796 scopus 로고    scopus 로고
    • Horizontal gene transfer of atrazine-degrading genes (atz) from Agrobacterium tumefaciens St96-4 pADP1::Tn5 to bacteria of maize-cultivated soil
    • Devers, M., Henry, H., Hartmann, A. Martin-Laurent, F. (2005) Horizontal gene transfer of atrazine-degrading genes (atz) from Agrobacterium tumefaciens St96-4 pADP1::Tn5 to bacteria of maize-cultivated soil. Pest Manag Sci 61, 970 880.
    • (2005) Pest Manag Sci , vol.61 , pp. 970-880
    • Devers, M.1    Henry, H.2    Hartmann, A.3    Martin-Laurent, F.4
  • 7
    • 33947578711 scopus 로고    scopus 로고
    • Genetic rearrangement of the atzAB atrazine-degrading gene cassette from pADP1::Tn5 to the chromosome of Variovorax sp. MD1 and MD2
    • Devers, M., Rouard, N. Martin-Laurent, F. (2007a) Genetic rearrangement of the atzAB atrazine-degrading gene cassette from pADP1::Tn5 to the chromosome of Variovorax sp. MD1 and MD2. Gene 392, 1 6.
    • (2007) Gene , vol.392 , pp. 1-6
    • Devers, M.1    Rouard, N.2    Martin-Laurent, F.3
  • 8
    • 34347401225 scopus 로고    scopus 로고
    • Detection and organization of atrazine-degrading genetic potential of seventeen bacterial isolates belonging to divergent taxa indicate a recent common origin of their catabolic functions
    • Devers, M., Azhari, N.E., Kolic, N.U. Martin-Laurent, F. (2007b) Detection and organization of atrazine-degrading genetic potential of seventeen bacterial isolates belonging to divergent taxa indicate a recent common origin of their catabolic functions. FEMS Microbiol Lett 273, 78 86.
    • (2007) FEMS Microbiol Lett , vol.273 , pp. 78-86
    • Devers, M.1    Azhari, N.E.2    Kolic, N.U.3    Martin-Laurent, F.4
  • 9
    • 0018162579 scopus 로고
    • A rapid method for the identification of plasmid desoxyribonucleic acid bacteria
    • Eckhardt, T. (1978) A rapid method for the identification of plasmid desoxyribonucleic acid bacteria. Plasmid 1, 584 588.
    • (1978) Plasmid , vol.1 , pp. 584-588
    • Eckhardt, T.1
  • 10
    • 12344321641 scopus 로고    scopus 로고
    • Degradation of some biorecalcitrant pesticides by homogeneous and heterogeneous photocatalytic ozonation
    • Farre, M.J., Franch, M.I., Malato, S., Ayllon, J.A., Peral, J. Domenech, X. (2005) Degradation of some biorecalcitrant pesticides by homogeneous and heterogeneous photocatalytic ozonation. Chemosphere 58, 1127 1133.
    • (2005) Chemosphere , vol.58 , pp. 1127-1133
    • Farre, M.J.1    Franch, M.I.2    Malato, S.3    Ayllon, J.A.4    Peral, J.5    Domenech, X.6
  • 11
    • 0032876852 scopus 로고    scopus 로고
    • Prokaryotic genome size and SSU rDNA copy number: Estimation of microbial relative abundance from a mixed population
    • Fogel, G.B., Collins, C.R., Li, J. Brunk, C.F. (1999) Prokaryotic genome size and SSU rDNA copy number: estimation of microbial relative abundance from a mixed population. Microb Ecol 38, 93 113.
    • (1999) Microb Ecol , vol.38 , pp. 93-113
    • Fogel, G.B.1    Collins, C.R.2    Li, J.3    Brunk, C.F.4
  • 12
    • 0038654426 scopus 로고    scopus 로고
    • On the origins of cyanuric acid hydrolase: Purification, substrates, and prevalence of AtzD from Pseudomonas sp. strain ADP
    • Fruchey, I., Shapir, N., Sadowsky, M.J. Wackett, L.P. (2003) On the origins of cyanuric acid hydrolase: purification, substrates, and prevalence of AtzD from Pseudomonas sp. strain ADP. Appl Environ Microbiol 69, 3653 3657.
    • (2003) Appl Environ Microbiol , vol.69 , pp. 3653-3657
    • Fruchey, I.1    Shapir, N.2    Sadowsky, M.J.3    Wackett, L.P.4
  • 13
    • 0034065684 scopus 로고    scopus 로고
    • Dependence of accelerated degradation of atrazine on soil pH in French and Canadian soils
    • Houot, S., Topp, E., Yassir, A. Soulas, G. (2000) Dependence of accelerated degradation of atrazine on soil pH in French and Canadian soils. Soil Biol Biochem 32, 615 625.
    • (2000) Soil Biol Biochem , vol.32 , pp. 615-625
    • Houot, S.1    Topp, E.2    Yassir, A.3    Soulas, G.4
  • 14
    • 0032792079 scopus 로고    scopus 로고
    • Gene sequence and properties of an s-triazine ring cleavage enzyme from Pseudomonas sp. strain NRRLB-12227
    • Karns, J.S. (1999) Gene sequence and properties of an s-triazine ring cleavage enzyme from Pseudomonas sp. strain NRRLB-12227. Appl Environ Microbiol 65, 3512 3517.
    • (1999) Appl Environ Microbiol , vol.65 , pp. 3512-3517
    • Karns, J.S.1
  • 15
    • 0032537770 scopus 로고    scopus 로고
    • Entrapment of atrazine chlorohydrolase in sol-gel glass matrix
    • Kauffmann, C. Mandelbaum, R.T. (1998) Entrapment of atrazine chlorohydrolase in sol-gel glass matrix. J Biotechnol 62, 169 176.
    • (1998) J Biotechnol , vol.62 , pp. 169-176
    • Kauffmann, C.1    Mandelbaum, R.T.2
  • 16
    • 33745787034 scopus 로고    scopus 로고
    • Interactions of earthworms with atrazine-degrading bacteria in an agricultural soil
    • Kersanté, A., Martin-Laurent, F., Soulas, G. Binet, F. (2006) Interactions of earthworms with atrazine-degrading bacteria in an agricultural soil. FEMS Microbiol Ecol 57, 192 205.
    • (2006) FEMS Microbiol Ecol , vol.57 , pp. 192-205
    • Kersanté, A.1    Martin-Laurent, F.2    Soulas, G.3    Binet, F.4
  • 20
    • 0027241801 scopus 로고
    • Mineralization of the s-triazine ring of atrazine by stable bacterial mixed cultures
    • Mandelbaum, R.T., Wackett, L.P. Allan, D.L. (1993) Mineralization of the s-triazine ring of atrazine by stable bacterial mixed cultures. Appl Environ Microbiol 59, 1695 1701.
    • (1993) Appl Environ Microbiol , vol.59 , pp. 1695-1701
    • Mandelbaum, R.T.1    Wackett, L.P.2    Allan, D.L.3
  • 21
    • 0028922453 scopus 로고
    • Isolation and characterization of a Pseudomonas sp. that mineralizes the s-triazine herbicide atrazine
    • Mandelbaum, R.T., Allan, D.L. Wackett, L.P. (1995) Isolation and characterization of a Pseudomonas sp. that mineralizes the s-triazine herbicide atrazine. Appl Environ Microbiol 61, 1451 1457.
    • (1995) Appl Environ Microbiol , vol.61 , pp. 1451-1457
    • Mandelbaum, R.T.1    Allan, D.L.2    Wackett, L.P.3
  • 22
    • 0034811709 scopus 로고    scopus 로고
    • Complete nucleotide sequence and organization of the atrazine catabolic plasmid pADP-1 from Pseudomonas sp. strain ADP
    • Martinez, B., Tomkins, J., Wackett, L.P., Wing, R. Sadowsky, M.J. (2001) Complete nucleotide sequence and organization of the atrazine catabolic plasmid pADP-1 from Pseudomonas sp. strain ADP. J Bacteriol 183, 5684 5697.
    • (2001) J Bacteriol , vol.183 , pp. 5684-5697
    • Martinez, B.1    Tomkins, J.2    Wackett, L.P.3    Wing, R.4    Sadowsky, M.J.5
  • 24
    • 33745505383 scopus 로고    scopus 로고
    • Impact of the maize rhizosphere on the genetic structure, the diversity and the atrazine-degrading gene composition of cultivable atrazine-degrading communities
    • Martin-Laurent, F., Barres, B., Wagschal, I., Piutti, S., Devers, M., Soulas, G. Philippot, L. (2006) Impact of the maize rhizosphere on the genetic structure, the diversity and the atrazine-degrading gene composition of cultivable atrazine-degrading communities. Plant Soil 282, 99 115.
    • (2006) Plant Soil , vol.282 , pp. 99-115
    • Martin-Laurent, F.1    Barres, B.2    Wagschal, I.3    Piutti, S.4    Devers, M.5    Soulas, G.6    Philippot, L.7
  • 25
    • 0037005990 scopus 로고    scopus 로고
    • The triazine hydrolase gene trzN from Nocardioides sp. strain C190: Cloning and construction of gene-specific primers
    • Mulbry, W.W., Zhu, H., Nour, S.M. Topp, E. (2002) The triazine hydrolase gene trzN from Nocardioides sp. strain C190: cloning and construction of gene-specific primers. FEMS Microbiol Lett 206, 75 79.
    • (2002) FEMS Microbiol Lett , vol.206 , pp. 75-79
    • Mulbry, W.W.1    Zhu, H.2    Nour, S.M.3    Topp, E.4
  • 27
    • 0346403224 scopus 로고    scopus 로고
    • Isolation and characterisation of Nocardioides sp. SP12, an atrazine-degrading bacterial strain possessing the gene trzN from bulk- and maize rhizosphere soil
    • Piutti, S., Semon, E., Landry, D., Hartmann, A., Dousset, S., Lichtfouse, E., Topp, E., Soulas, G. et al. (2003) Isolation and characterisation of Nocardioides sp. SP12, an atrazine-degrading bacterial strain possessing the gene trzN from bulk- and maize rhizosphere soil. FEMS Microbiol Lett 221, 111 117.
    • (2003) FEMS Microbiol Lett , vol.221 , pp. 111-117
    • Piutti, S.1    Semon, E.2    Landry, D.3    Hartmann, A.4    Dousset, S.5    Lichtfouse, E.6    Topp, E.7    Soulas, G.8
  • 28
    • 0032766550 scopus 로고    scopus 로고
    • The use of granular activated carbon for the treatment of impounded surface water
    • Pryor, M.J., Nozaic, D., Freese, S.D. Rajagopaul, R. (1999) The use of granular activated carbon for the treatment of impounded surface water. Water Sci Technol 39, 197 200.
    • (1999) Water Sci Technol , vol.39 , pp. 197-200
    • Pryor, M.J.1    Nozaic, D.2    Freese, S.D.3    Rajagopaul, R.4
  • 29
    • 0034933614 scopus 로고    scopus 로고
    • Isolation and characterisation of new Gram-negative and Gram-positive atrazine degrading bacteria from different French soils
    • Rousseaux, S., Hartmann, A. Soulas, G. (2001) Isolation and characterisation of new Gram-negative and Gram-positive atrazine degrading bacteria from different French soils. FEMS Microbiol Ecol 36, 211 222.
    • (2001) FEMS Microbiol Ecol , vol.36 , pp. 211-222
    • Rousseaux, S.1    Hartmann, A.2    Soulas, G.3
  • 30
    • 0036095585 scopus 로고    scopus 로고
    • Plasmid localisation of atrazine-degrading genes in newly described Chelatobacter and Arthrobacter strains
    • Rousseaux, S., Soulas, G. Hartmann, A. (2002) Plasmid localisation of atrazine-degrading genes in newly described Chelatobacter and Arthrobacter strains. FEMS Microbiol Ecol 41, 69 75.
    • (2002) FEMS Microbiol Ecol , vol.41 , pp. 69-75
    • Rousseaux, S.1    Soulas, G.2    Hartmann, A.3
  • 31
    • 3242743105 scopus 로고    scopus 로고
    • Arthrobacter aurescens TC1 atrazine catabolism genes trzN, atzB, and atzC are linked on a 160-kilobase region and are functional in Escherichia coli
    • Sajjaphan, K., Shapir, N., Wackett, L.P., Palmer, M., Blackmon, B., Tomkins, J. Sadowsky, M.J. (2004) Arthrobacter aurescens TC1 atrazine catabolism genes trzN, atzB, and atzC are linked on a 160-kilobase region and are functional in Escherichia coli. Appl Environ Microbiol 70, 4402 4407.
    • (2004) Appl Environ Microbiol , vol.70 , pp. 4402-4407
    • Sajjaphan, K.1    Shapir, N.2    Wackett, L.P.3    Palmer, M.4    Blackmon, B.5    Tomkins, J.6    Sadowsky, M.J.7
  • 32
    • 33645663558 scopus 로고    scopus 로고
    • Characterisation of new strains of atrazine-degrading Nocardioides sp. isolated from Japanese riverbed sediment using naturally derived river ecosystem
    • Satsuma, K. (2006) Characterisation of new strains of atrazine-degrading Nocardioides sp. isolated from Japanese riverbed sediment using naturally derived river ecosystem. Pest Manag Sci 62, 340 349.
    • (2006) Pest Manag Sci , vol.62 , pp. 340-349
    • Satsuma, K.1
  • 33
    • 20444383161 scopus 로고    scopus 로고
    • Cooperative catabolic pathways within an atrazine-degrading enrichment culture isolated from soil
    • Smith, D., Alvey, S. Crowley, D.E. (2005) Cooperative catabolic pathways within an atrazine-degrading enrichment culture isolated from soil. FEMS Microbiol Ecol 53, 265 273.
    • (2005) FEMS Microbiol Ecol , vol.53 , pp. 265-273
    • Smith, D.1    Alvey, S.2    Crowley, D.E.3
  • 35
    • 0031745940 scopus 로고    scopus 로고
    • The atzABC genes encoding atrazine catabolism are located on a self-transmissible plasmid in Pseudomonas sp. strain ADP
    • de Souza, M.L., Wackett, L.P. Sadowsky, M.J. (1998b) The atzABC genes encoding atrazine catabolism are located on a self-transmissible plasmid in Pseudomonas sp. strain ADP. Appl Environ Microbiol 64, 2323 2326.
    • (1998) Appl Environ Microbiol , vol.64 , pp. 2323-2326
    • De Souza, M.L.1    Wackett, L.P.2    Sadowsky, M.J.3
  • 37
    • 0031707786 scopus 로고    scopus 로고
    • Biodegradation of atrazine by Agrobacterium radiobacter J14a and use of this strain in bioremediation of contaminated soil
    • Struthers, J.K., Jayachandran, K. Moorman, T.B. (1998) Biodegradation of atrazine by Agrobacterium radiobacter J14a and use of this strain in bioremediation of contaminated soil. Appl Environ Microbiol 64, 3368 3375.
    • (1998) Appl Environ Microbiol , vol.64 , pp. 3368-3375
    • Struthers, J.K.1    Jayachandran, K.2    Moorman, T.B.3
  • 38
    • 0033931985 scopus 로고    scopus 로고
    • Characterization of an atrazine-degrading Pseudaminobacter sp. isolated from Canadian and French agricultural soils
    • Topp, E., Zhu, H., Nour, S.M., Houot, S., Lewis, M. Cuppels, D. (2000) Characterization of an atrazine-degrading Pseudaminobacter sp. isolated from Canadian and French agricultural soils. Appl Environ Microbiol 66, 2773 2782.
    • (2000) Appl Environ Microbiol , vol.66 , pp. 2773-2782
    • Topp, E.1    Zhu, H.2    Nour, S.M.3    Houot, S.4    Lewis, M.5    Cuppels, D.6
  • 39
    • 0042784115 scopus 로고    scopus 로고
    • Enrichment and characterization of atrazine degrading bacterial communities
    • Udiković, N., Hršak, D., Mendaš, G. Filipčić, D. (2003) Enrichment and characterization of atrazine degrading bacterial communities. Food Technol Biotechnol 41, 211 217.
    • (2003) Food Technol Biotechnol , vol.41 , pp. 211-217
    • Udiković, N.1    Hršak, D.2    Mendaš, G.3    Filipč ić, D.4
  • 40
    • 18244404547 scopus 로고    scopus 로고
    • Degradation of atrazine in a laboratory scale model system with Danube river sediment
    • Vargha, M., Takats, Z. Marialigeti, K. (2005) Degradation of atrazine in a laboratory scale model system with Danube river sediment. Water Res 39, 1560 1568.
    • (2005) Water Res , vol.39 , pp. 1560-1568
    • Vargha, M.1    Takats, Z.2    Marialigeti, K.3
  • 41
    • 0002480530 scopus 로고
    • Changes in the Rhizobium meliloti genome and the ability to detect supercoiled plasmids during bacteroid development
    • Wheatcroft, R., McRae, D.G. Miller, R.W. (1990) Changes in the Rhizobium meliloti genome and the ability to detect supercoiled plasmids during bacteroid development. Mol Plant Microbe Interact 3, 9 17.
    • (1990) Mol Plant Microbe Interact , vol.3 , pp. 9-17
    • Wheatcroft, R.1    McRae, D.G.2    Miller, R.W.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.