A general approach to differential sensing using synthetic molecular receptors

Current Opinion in Chemical Biology

Volumn 14, Issue 6, 2010, Pages 685-692

  Umali, Alona P ^b   Anslyn, Eric V ^a,b  

^a UNIVERSITY OF TEXAS AT AUSTIN   (United States)

^b Section of Molecular Genetics and Microbiology   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CROSS REACTION; PEPTIDE ANALYSIS; PRINCIPAL COMPONENT ANALYSIS; PROTEIN PHOSPHORYLATION; REVIEW;

CARBOHYDRATE METABOLISM; CARBOHYDRATES; FLAVONOIDS; HUMANS; PHOSPHOPROTEINS; SMALL MOLECULE LIBRARIES;

EID: 78649817070     PISSN: 13675931     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.cbpa.2010.07.022     Document Type: Review

References (46)

1. Anslyn E.V. Supramolecular analytical chemistry. J Org Chem 2007, 72:687-699.
2. Wright A.T., Anslyn E.V. Differential receptor arrays and assays for solution-based molecular recognition. Chem Soc Rev 2006, 35:14-28.
3. Collins B.E., Wright A.T., Anslyn E.V. Combining molecular recognition, optical detection, and chemometric analysis. Top Curr Chem 2007, 277:181-218.
4. Albert K.J., Lewis N.S., Schauer C.L., Sotzing G.A., Stitzel S.E., Vaid T.P., Walt D.R. Cross-reactive chemical sensor arrays. Chem Rev 2000, 100:2595-2696.
5. Eriksson L., Johansson E., Kettaneh-Wold N., Trygg J., Wikström C., Wold S. Multi- and Megavariate Data Analysis Part I: Basic Principles and Applications 2006, Umetrics AB, Umeå. 2nd edn.
6. Jurs P.C., Bakken G.A., McClelland H.E. Computational methods for the analysis of chemical sensor array data from volatile analytes. Chem Rev 2000, 100:2649-2678.
7. Winquist F., Kratz-Rulcker C., Lundstrom I. Electronic tongues. MRS Bull 2004, 726-731.
8. Gouma P., Sberveglieri G. Novel materials and applications of electronic noses and tongues. MRS Bull 2004, 697-702.
9. Margulies D., Hamilton A.D. Protein recognition by an ensemble of fluorescent DNA G-Quadruplexes. Angew Chem Int Ed 2009, 48:1771-1774.
10. Zaubitzer F., Riss-Johannessen T., Severin K. Sensing of peptide hormones with dynamic combinatorial libraries of metal-dye complexes: the advantage of time-resolved measurements. Org Biomol Chem 2009, 7:4598-4603.
11. De M., Rana S., Akpinar H., Miranda O.R., Arvizo R.R., Bunz U.H.F., Rotello V.M. Sensing of proteins in human serum using conjugates of nanoparticles and green fluorescent protein. Nat Chem 2009, 1:461-465. S461/461-S461/426.
12. Miranda O.R., Chen H.-T., You C.-C., Mortenson D.E., Yang X.-C., Bunz U.H.F., Rotello V.M. Enzyme-amplified array sensing of proteins in solution and in biofluids. J Am Chem Soc 2010, 132:5285-5289.
13. Rochat S., Gao J., Qian X., Zaubitzer F., Severin K. Cross-reactive sensor arrays for the detection of peptides in aqueous solution by fluorescence spectroscopy. Chem Eur J 2010, 16:104-113.
14. Collins B.E., Anslyn E.V. Pattern-based peptide recognition. Chem Eur J 2007, 13:4700-4708.
15. Viljanen J., Larsson J., Larsson A., Broo K.S. A multipurpose receptor composed of promiscuous proteins. Analyte detection through pattern recognition. Bioconjugate Chem 2007, 18:1935-1945.
16. Schiller A., Vilozny B., Wessling R.A., Singaram B. Recogntion of phospho sugars and nucleotides with an array of boronic acid appended bipyridinum salts. Anal Chim Acta 2008, 627:203-211.
17. Lim S.H., Musto C.J., Park E., Zhong W., Suslick K.S. A colorimetric sensor array for detection and identification of sugars. Org Lett 2008, 10:4405-4408.
18. Jagt R.B.C., Gomez-Biagi R.F., Nitz M. Pattern-based recognition of heparin contaminants by an array of self-assembling fluorescent receptors. Angew Chem Int Ed 2009, 48:1995-1997.
19. Muller-Graff P.-K., Szelke H., Severin K., Kramer R. Pattern-based sensing of sulfated glycosaminoglycans with a dynamic mixture of iron complexes. Org Biomol Chem 2010, 8:2269-2480.
20. Palacios M.A., Nishiyabu R., Marquez M., Anzenbacher P.J. Supramolecular chemistry approach to the design of a high-resolution sensor array for multianion detection in water. J Am Chem Soc 2007, 129:7538-7544.
21. Wang Z., Palacios M.A., Anzenbacher P.J. Fluorescence sensor array for metal ion detection based on various coordination chemistries: general performance and potential application. Anal Chem 2008, 80:7451-7459.
22. Palacios M.A., Wang Z., Montes V.A., Zyryanov G.V., Anzenbacher P.J. Rational design of a minimal size sensor array for metal ion detection. J Am Chem Soc 2008, 130:10307-10314.
23. Lim S.H., Feng L., Kemling J.W., Musto C.J., Suslick K.S. An optoelectronic nose for the detection of toxic gases. Nat Chem 2009, 1:562-567.
24. Feng L., Musto C.J., Kemling J.W., Lim S.H., Suslick K.S. A colorimetric sensor array for identification of toxic gases below permissible exposure limits. Chem Commun 2010, 46:2037-2039.
25. Suslick B.A., Feng L., Suslick K.S. Discrimination of complex mixtures by a colorimetric sensor array: coffee aromas. Anal Chem (Washington, DC, U.S.) 2010, 82:2067-2073.
26. Adams M.M., Anslyn E.V. Differential sensing using proteins: exploiting the cross-reactivity of serum albumin to pattern individual terpenes and terpenes in perfume. J Am Chem Soc 2009, 131:17068-17069.
27. Ponnu A., Edwards N.Y., Anslyn E.V. Pattern recognition based identification of nitrated explosives. New J Chem 2008, 32:848-855.
28. Hughes A.D., Glenn I.C., Patrick A.D., Ellington A., Anslyn E.V. A pattern recognition based fluorescence quenching assay for the detection and identification of nitrated explosive analytes. Chem Eur J 2008, 14:1822-1827.
29. Hewage H.S., Anslyn E.V. Pattern-based recognition of thiols and metals using a single squarine indicator. J Am Chem Soc 2009, 131:13099-13106.
30. Bang J.H., Lim S.H., Park E., Suslick K.S. Chemically responsive nanoporous pigments: colorimetric sensor arrays and the identification of aliphatic amines. Langmuir 2008, 24:13168-13172.
31. Bajaj A., Miranda O.R., Kim I.-B., Phillips R.L., Jerry D.J., Bunz U.H.F., Rotello V.M. Detection and differentiation of normal, carcerous, and metastatic cells using nanoparticle-polymer sensor arrays. Proc Nat Acad Sci 2009, 106:10912-10916.
32. Bajaj A., Miranda O.R., Phillips R., Kim I.-B., Jerry D.J., Bunz U.H.F., Rotello V.M. Array-based sensing of normal, cancerous, and metastatic cells using conjugated fluorescent polymers. J Am Chem Soc 2010, 132:1018-1022.
33. Shabbir S.H, Joyce L.A., da Cruz G.M., Lynch V.M., Sorey S., Anslyn E.V. Pattern-based recogntion for the rapid determination of identity, concentration, and enantiomeric excess of subtly different threo diols. J Am Chem Soc 2009, 131:13125-13131.
34. Nieto S., Lynch V.M., Anslyn E.V., Kim H., Chin J. High-throughput screening of identity, enantiomeric excess, and concentration using MLCT transitions in CD spectroscopy. J Am Chem Soc 2008, 130:9232-9233.
35. Lavigne J.J., Anslyn E.V. Sensing a paradigm shift in the field of molecular recognition: from selective to differential sensors. Angew Chem Int Ed 2001, 40:3118-3130.
36. Kitamura M., Shabbir S.H., Anslyn E.V. Guidelines for pattern recognition using differential receptors and indicator displacement assays. J Org Chem 2009, 74:4479-4489.
37. Schneider S.E., O'Neil S.N., Anslyn E.V. Coupling rational design with libraries leads to the production of an ATP selective chemosensor. J Am Chem Soc 2000, 122:542-543.
38. McCleskey S.C., Griffin M.J., Schneider S.E., McDevitt J.T., Anslyn E.V. Differential receptors create patterns diagnostic for ATP and GTP. J Am Chem Soc 2003, 125:1114-1115.
39. Wiskur S.L., Ait-Haddou H., Lavigne J.J., Anslyn E.V. Teaching old indicators new tricks. Acc Chem Res 2001, 34:963-972.
40. Wright A.T., Griffin M.J., Zhenlin Z., McCleskey S.C., Anslyn E.V., McDevitt J.T. Differential receptors create patterns that distinguish various proteins. Angew Chem Int Ed 2005, 44:6375-6378.
41. Wright A.T., Anslyn E.V., McDevitt J.T. A differential array of metalated synthetic receptors for the analysis of tripeptide mixtures. J Am Chem Soc 2005, 127:17405-17411.
42. Wright A.T., Edwards N.Y., Anslyn E.V., McDevitt J.T. The discriminatory power of differential receptor arrays is improved by prescreening-a demonstration in the analysis of tachykinins and similar peptides. Angew Chem Int Ed 2007, 46:8212-8215.
43. Zhang T., Edwards N.Y., Bonizzoni M., Anslyn E.V. The use of differential receptors to pattern peptide phosphorylation. J Am Chem Soc 2009, 131:11976-11984.
44. Buryak A., Pozdnoukhov A., Severin K. Pattern-based sensing of nucleotides in aqeuous solution with a multicomponent indicator displacement assay. Chem Commun 2007, 2366-2368.
45. Buryak A., Zaubitzer F., Pozdnoukhov A., Severin K. Indicator displacement assays as molecular timers. J Am Chem Soc 2008, 130:11260-11261.
46. Edwards N.Y., Sager T.W., McDevitt J.T., Anslyn E.V. Boronic acid based peptidic receptors for pattern-based saccharide sensing in neutral aqueous media, an application in real-life samples. J Am Chem Soc 2007, 129:13575-13583.