Effects of transmission reduction by insecticide-treated bed nets (ITNs) on parasite genetics population structure: I. the genetic diversity of Plasmodium falciparum parasites by microsatellite markers in western Kenya

Malaria Journal

Volumn 9, Issue 1, 2010, Pages

  Gatei, Wangeci ^a,b   Kariuki, Simon ^c   Hawley, William ^a   Ter Kuile, Feiko ^d   Terlouw, Dianne ^d   Phillips Howard, Penelope ^c,e   Nahlen, Bernard ^f   Gimnig, John ^a   Lindblade, Kim ^a   Walker, Edward ^g   Hamel, Mary ^a,c   Crawford, Sara ^a   Williamson, John ^a   Slutsker, Laurence ^a   Shi, Ya Ping ^a  

^a CENTERS FOR DISEASE CONTROL AND PREVENTION   (United States)

^b ATLANTA RESEARCH AND EDUCATION FOUNDATION   (United States)

^c KENYA MEDICAL RESEARCH INSTITUTE   (Kenya)

^d LIVERPOOL SCHOOL OF TROPICAL MEDICINE   (United Kingdom)

^e LIVERPOOL JOHN MOORES UNIVERSITY   (United Kingdom)

^f President's Malaria Initiative   (United States)

^g MICHIGAN STATE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BINDING PROTEIN; BIOLOGICAL MARKER; DNA DIRECTED DNA POLYMERASE ALPHA; ERYTHROCYTE BINDING PROTEIN; FRUCTOSE BISPHOSPHATE ALDOLASE; GENOMIC DNA; INSECTICIDE; MEROZOITE SURFACE PROTEIN 1; PROTEIN KINASE; PROTOZOAL DNA; PROTOZOAL PROTEIN; UNCLASSIFIED DRUG; MICROSATELLITE DNA;

ARTICLE; BED NET; CHILD; DISEASE TRANSMISSION; GAMETOCYTE; GENE FREQUENCY; GENE LINKAGE DISEQUILIBRIUM; GENE LOCUS; GENETIC STABILITY; GENETIC VARIABILITY; GENOTYPE; HETEROZYGOSITY; HUMAN; KENYA; MAJOR CLINICAL STUDY; MALARIA FALCIPARUM; MICROSATELLITE MARKER; MIXED INFECTION; NONHUMAN; NUCLEOTIDE SEQUENCE; PLASMODIUM FALCIPARUM; POPULATION STRUCTURE; PRESCHOOL CHILD; PROTOZOAL GENETICS; TREND STUDY; CLASSIFICATION; GENETICS; INFANT; ISOLATION AND PURIFICATION; METHODOLOGY; MOSQUITO; NEWBORN; PARASITOLOGY;

CHILD, PRESCHOOL; GENETIC VARIATION; HUMANS; INFANT; INFANT, NEWBORN; INSECTICIDE-TREATED BEDNETS; KENYA; MALARIA, FALCIPARUM; MICROSATELLITE REPEATS; MOSQUITO CONTROL; PLASMODIUM FALCIPARUM;

EID: 78649710450     PISSN: None     EISSN: 14752875     Source Type: Journal    
DOI: 10.1186/1475-2875-9-353     Document Type: Article

References (61)

1. World Malaria Report. WHO, WHO Library Cataloguing-in-Publication Data 2008 25
2. Insecticide-treated bed nets and curtains for preventing malaria. C Lengeler, Cochrane Database Syst Rev 2004 D000363 15106149
3. Insecticide-treated nets for preventing malaria in pregnancy. C Gamble JP Ekwaru FO ter Kuile, Cochrane Database of Systematic Reviews 2006 19 2 D003755
4. Insecticide-Treated Nets. J Hill J Lines M Rowland HM David, Adv Parasitol Academic Press 2006 61 77 128 10.1016/S0065-308X(05)61003-2 16735163
5. Insecticide treated nets: impact on vector populations and relevance of initial intensity of transmission and pyrethroid resistance. CF Curtis B Jana-Kara CA Maxwell, J Vector Borne Dis 2003 40 1 8 15119065
6. Effect of permethrin-treated bed nets on the spatial distribution of malaria vectors in western Kenya. JE Gimnig MS Kolczak AW Hightower JM Vulule E Schoute L Kamau PA Phillips-Howard FO ter Kuile BL Nahlen WA Hawley, Am J Trop Med Hyg 2003 68 115 120 12749494
7. Permethrin-impregnated bednets: behavioural and killing effects on mosquitoes. MI Hossain CF Curtis, Med Vet Entomol 1989 4 367 376 10.1111/j.1365-2915.1989.tb00243.x
8. Reduced susceptibility of Anopheles gambiae to permethrin associated with the use of permethrin-impregnated bednets and curtains in Kenya. JM Vulule RF Beach FK Atieli JM Roberts DL Mount RW Mwangi, Med Vet Entomol 1994 8 71 75 10.1111/j.1365-2915.1994.tb00389.x 8161849
9. Impact of sustained use of insecticide-treated bednets on malaria vector species distribution and culicine mosquitoes. KA Lindblade JE Gimnig L Kamau WA Hawley F Odhiambo G Olang FO Ter Kuile JM Vulule L Slutsker, J Med Entomol 2006 43 428 432 10.1603/0022-2585(2006)043[0428:IOSUOI]2.0.CO;2 16619629
10. The use of impregnated curtains does not affect antibody responses against Plasmodium falciparum and complexity of infecting parasite populations in children from Burkina Faso. A Bolad I Nebie F Esposito K Berzins, Acta Trop 2004 90 237 247 10.1016/j.actatropica.2003.12.004 15099810
11. Effect of insecticide-treated bed nets on the dynamics of multiple Plasmodium falciparum infections. T Smith I Felger N Fraser-Hurt HP Beck, Trans R Soc Trop Med Hyg 1999 93 Suppl 1 53 57 10.1016/S0035-9203(99)90328-0 10450427 (Pubitemid 29123576)
12. Manipulating the Plasmodium genome. TG Carvalho R Menard, Curr Issues Mol Biol 2005 7 39 55 15580779
13. Population structure and recent evolution of Plasmodium falciparum. SM Rich FJ Ayala, Proc Natl Acad Sci USA 2000 97 6994 7001 10.1073/pnas.97.13.6994 10860962
14. [Malaria, genetics and molecular biology: myths, hopes and realities]. P Ambroise-Thomas, Annales pharmaceutiques françaises 2001 59 93 104
15. Sex allocation and population structure in malaria and related parasitic protozoa. AF Read M Anwar D Shutler S Nee, Proc Biol Sci 1995 260 359 363 10.1098/rspb.1995.0105 7630901
16. Population genetics and dynamics of Plasmodium falciparum: an ecological view. KP Day JC Koella S Nee S Gupta AF Read, Parasitology 1992 104 Suppl 35 52 10.1017/S0031182000075235 1589299
17. Microsatellite markers reveal a spectrum of population structures in the malaria parasite Plasmodium falciparum. TJ Anderson B Haubold JT Williams JG Estrada-Franco L Richardson R Mollinedo M Bockarie J Mokili S Mharakurwa N French J Whitworth ID Velez AH Brockman F Nosten MU Ferreira KP Day, Mol Biol Evol 2000 17 1467 1482 11018154
18. Transmission stage investment of malaria parasites in response to in-host competition. AR Wargo JC de Roode S Huijben DR Drew AF Read, Proc Biol Sci 2007 274 2629 2638 10.1098/rspb.2007.0873 17711832
19. Genetic epidemiology of parasitic protozoa and other infectious agents: the need for an integrated approach. M Tibayrenc, Int J Parasitol 1998 28 81 104 10.1016/S0020-7519(97)00180-X (Pubitemid 28082062)
20. Estimation of average heterozygosity and genetic distance from a small number of individuals. M Nei, Genetics 1978 89 583 590 17248844
21. Estimation of inbreeding parameters in stratified populations. CC Cockerham BS Weir, Ann Hum Genet 1986 50 271 281 10.1111/j.1469-1809.1986. tb01048.x 3446014
22. M Nei, Molecular evolutionary genetics, Genetic variation within species New York: Columbia University Press 1987
23. Population structure of malaria parasites: The driving epidemiological forces. C Gauthier M Tibayrenc, Acta Trop 2005 94 241 250 15840463
24. Recombination hotspots and population structure in Plasmodium falciparum. J Mu P Awadalla J Duan KM McGee DA Joy GA McVean XZ Su, PLoS Biol 2005 3 335 10.1371/journal.pbio.0030335 16144426
25. Current views on the population structure of Plasmodium falciparum: Implications for control. HA Babiker D Walliker, Parasitol Today 1997 13 262 267 10.1016/S0169-4758(97)01075-2 15275063 (Pubitemid 27310619)
26. Evidence for clonal propagation in natural isolates of Plasmodium falciparum from Venezuela. L Urdaneta A Lal C Barnabe B Oury I Goldman FJ Ayala M Tibayrenc, Proc Natl Acad Sci USA 2001 98 6725 6729 10.1073/pnas.111144998 11371616
27. Significant linkage disequilibrium and high genetic diversity in a population of Plasmodium falciparum from an area (Republic of the Congo) highly endemic for malaria. P Durand Y Michalakis S Cestier B Oury MC Leclerc M Tibayrenc F Renaud, Am J Trop Med Hyg 2003 68 345 349 12685643
28. "Clonal" population structure of the malaria agent Plasmodium falciparum in high-infection regions. FG Razakandrainibe P Durand JC Koella T De Meeus F Rousset FJ Ayala F Renaud, Proc Natl Acad Sci USA 2005 102 17388 17393 10.1073/pnas.0508871102 16301534
29. The dynamics of mutations associated with anti-malarial drug resistance in Plasmodium falciparum. AA Escalante DL Smith Y Kim, Trends Parasitol 2009 25 557 563 10.1016/j.pt.2009.09.008 19864183
30. Genetic diversity and malaria vaccine design, testing and efficacy: preventing and overcoming 'vaccine resistant malaria'. SL Takala CV Plowe, Parasite Immunol 2009 31 560 573 10.1111/j.1365-3024.2009.01138.x 19691559
31. Impact of permethrin-treated bed nets on malaria, anemia, and growth in infants in an area of intense perennial malaria transmission in western Kenya. FO ter Kuile DJ Terlouw SK Kariuki PA Phillips-Howard LB Mirel WA Hawley JF Friedman YP Shi MS Kolczak AA Lal JM Vulule BL Nahlen, Am J Trop Med Hyg 2003 68 68 77 12749488
32. Efficacy of permethrin-treated bed nets in the prevention of mortality in young children in an area of high perennial malaria transmission in western Kenya. PA Phillips-Howard BL Nahlen MS Kolczak AW Hightower FO ter Kuile JA Alaii JE Gimnig J Arudo JM Vulule A Odhacha SP Kachur E Schoute DH Rosen JD Sexton AJ Oloo WA Hawley, Am J Trop Med Hyg 2003 68 23 29 12749482
33. Sustainability of reductions in malaria transmission and infant mortality in western Kenya with use of insecticide-treated bednets: 4 to 6 years of follow-up. KA Lindblade TP Eisele JE Gimnig JA Alaii F Odhiambo FO ter Kuile WA Hawley KA Wannemuehler PA Phillips-Howard DH Rosen BL Nahlen DJ Terlouw K Adazu JM Vulule L Slutsker, JAMA 2004 291 2571 2580 10.1001/jama.291.21.2571 15173148
34. The effects of varying exposure to malaria transmission on development of antimalarial antibody responses in preschool children. XVI. Asembo Bay Cohort Project. LM Singer LB Mirel FO ter Kuile OH Branch JM Vulule MS Kolczak WA Hawley SK Kariuki DC Kaslow DE Lanar AA Lal, J Infect Dis 2003 187 1756 1764 10.1086/375241 12751033
35. BR Kirkwood, Essentials of medical statistics Blackwell Science 2001
36. Toward a high-resolution Plasmodium falciparum linkage map: polymorphic markers from hundreds of simple sequence repeats. X Su TE Wellems, Genomics 1996 33 430 444 10.1006/geno.1996.0218 8661002
37. Twelve microsatellite markers for characterization of Plasmodium falciparum from finger-prick blood samples. TJ Anderson XZ Su M Bockarie M Lagog KP Day, Parasitology 1999 119 Pt 2 113 125 10.1017/S0031182099004552 10466118
38. A selective sweep driven by pyrimethamine treatment in southeast asian malaria parasites. S Nair JT Williams A Brockman L Paiphun M Mayxay PN Newton JP Guthmann FM Smithuis TT Hien NJ White F Nosten TJ Anderson, Mol Biol Evol 2003 20 1526 1536 10.1093/molbev/msg162 12832643
39. Temporal change in genetic structure and effective population size in steelhead trout (Oncorhynchus mykiss). DD Heath C Busch J Kelly DY Atagi, Mol Ecol 2002 11 197 214 10.1046/j.1365-294X.2002.01434.x 11856422
40. Trypanotolerance in West African Cattle and the Population Genetic Effects of Selection. SDE Park, PhD Thesis 2001 Internet Download
41. From clonal to sexual: a step in T. congolense evolution? P Holzmuller S Herder G Cuny T De Meeus, Trends Parasitol 2010 26 56 60 10.1016/j.pt.2009.11. 006 20006549
42. MalHaploFreq: a computer programme for estimating malaria haplotype frequencies from blood samples. IM Hastings TA Smith, Malar J 2008 7 130 10.1186/1475-2875-7-130 18627599
43. Antifolate resistance in Plasmodium falciparum: multiple origins and identification of novel dhfr alleles. AM McCollum AC Poe M Hamel C Huber Z Zhou YP Shi P Ouma J Vulule P Bloland L Slutsker JW Barnwell V Udhayakumar AA Escalante, J Infect Dis 2006 194 189 197 10.1086/504687 16779725
44. Plasmodium falciparum genetic diversity in western Kenya highlands. D Zhong Y Afrane A Githeko Z Yang L Cui DM Menge EA Temu G Yan, Am J Trop Med Hyg 2007 77 1043 1050 18165519
45. Complex mutations in a high proportion of microsatellite loci from the protozoan parasite Plasmodium falciparum. TJ Anderson XZ Su A Roddam KP Day, Mol Ecol 2000 9 1599 1608 10.1046/j.1365-294x.2000.01057.x 11050555
46. FSTAT (version 1.2): a computer program to calculate F-statistics. J Goudet, Journal of heredity 1995 86 485
47. Linkage disequilibrium in growing and stable populations. M Slatkin, Genetics 1994 137 331 336 8056320
48. Arlequin ver. 3.0: An integrated software package for population genetics data analysis. L Excoffier G Laval S Schneider, Evolutionary Bioinformatics Online 2005 1 47 50 19325852
49. LIAN 3.0: detecting linkage disequilibrium in multilocus data. Linkage Analysis. B Haubold RR Hudson, Bioinformatics 2000 9 847 848 10.1093/bioinformatics/16.9.847
50. Estimating F-statistics for the analysis of population structure. BS Weir, Evolution 1984 38 1358 10.2307/2408641
51. The estimation of population differentiation with microsatellite markers. F Balloux N Lugon-Moulin, Mol Ecol 2002 11 155 165 10.1046/j.0962-1083.2001. 01436.x 11856418
52. Analyzing Tables of Statistical Tests. W Rice, Evolution 1989 43 223 225 10.2307/2409177
53. Characteristics of Plasmodium falciparum parasites that survive the lengthy dry season in eastern Sudan where malaria transmission is markedly seasonal. HA Babiker AM Abdel-Muhsin LC Ranford-Cartwright G Satti D Walliker, Am J Trop Med Hyg 1998 59 582 590 9790434
54. Differences in genetic population structures of Plasmodium falciparum isolates from patients along Thai-Myanmar border with severe or uncomplicated malaria. P Susomboon M Iwagami N Tangpukdee S Krusood S Looareesuwan S Kano, Malar J 2008 7 212 10.1186/1475-2875-7-212 18937873
55. Detecting signatures of balancing selection to identify targets of anti-parasite immunity. GD Weedall DJ Conway, Trends Parasitol 26 363 369 10.1016/j.pt.2010.04.002 20466591
56. Effects of permethrin-treated bed nets on immunity to malaria in western Kenya II. Antibody responses in young children in an area of intense malaria transmission. SK Kariuki AA Lal DJ Terlouw FO ter Kuile JM Ong'echa PA Phillips-Howard AS Orago MS Kolczak WA Hawley BL Nahlen YP Shi, Am J Trop Med Hyg 2003 68 108 114 12749493
57. Impact of permethrin-treated bed nets on malaria and all-cause morbidity in young children in an area of intense perennial malaria transmission in western Kenya: cross-sectional survey. FO ter Kuile DJ Terlouw PA Phillips-Howard WA Hawley JF Friedman MS Kolczak SK Kariuki YP Shi AM Kwena JM Vulule BL Nahlen, Am J Trop Med Hyg 2003 68 100 107 12749492
58. Evidence for diversifying selection on erythrocyte-binding antigens of Plasmodium falciparum and P. vivax. J Baum AW Thomas DJ Conway, Genetics 2003 163 1327 1336 12702678
59. Molecular cloning, stage-specific expression and cellular distribution of a putative protein kinase from Plasmodium falciparum. Y Zhao B Kappes J Yang RM Franklin, Eur J Biochem 1992 207 305 313 10.1111/j.1432-1033.1992.tb17051.x 1378403
60. COS cell expression cloning of Pfg377, a Plasmodium falciparum gametocyte antigen associated with osmiophilic bodies. P Alano D Read M Bruce M Aikawa T Kaido T Tegoshi S Bhatti DK Smith C Luo S Hansra R Carter JF Elliott, Mol Biochem Parasitol 1995 74 143 156 10.1016/0166-6851(95)02491-3 8719156
61. Molecular approaches to monitor parasite genetic complexity in the transmission of Plasmodium falciparum malaria. P Alano, Parassitologia 2005 47 199 203 16252474