Reassortant group a rotavirus from straw-colored fruit bat (Eidolon helvum)

Emerging Infectious Diseases

Volumn 16, Issue 12, 2010, Pages 1844-1852

  Esona, Mathew D ^a   Mijatovic Rustempasic, Slavica ^a   Conrardy, Christina ^a   Tong, Suxiang ^a   Kuzmin, Ivan V ^a   Agwanda, Bernard ^b   Breiman, Robert F ^c   Banyai, Krisztian ^d   Niezgoda, Michael ^a   Rupprecht, Charles E ^a   Gentsch, Jon R ^a   Bowen, Michael D ^a  

^a CENTERS FOR DISEASE CONTROL AND PREVENTION   (United States)

^b INSTITUTE OF PRIMATE RESEARCH   (Kenya)

^c Centers for Disease Control and Prevention Kenya   (Kenya)

^d INSTITUTE OF EXPERIMENTAL MEDICINE   (Hungary)

Author keywords

[No Author keywords available]

Indexed keywords

NONSTRUCTURAL PROTEIN 2; NONSTRUCTURAL PROTEIN 3; NONSTRUCTURAL PROTEIN 4; NONSTRUCTURAL PROTEIN 5; PROTEIN VP1; PROTEIN VP2; PROTEIN VP4; PROTEIN VP6; PROTEIN VP7;

AMINO ACID SEQUENCE; ARTICLE; BAT; CONTROLLED STUDY; EIDOLON HELVUM; GENETIC REASSORTMENT; GENOTYPE; HUMAN; NONHUMAN; NUCLEIC ACID ANALYSIS; NUCLEOTIDE SEQUENCE; PHYLOGENY; PROTEIN ANALYSIS; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; ROTAVIRUS; ROTAVIRUS A; ROTAVIRUS B; ROTAVIRUS C; STRAW; VIRUS ISOLATION; VIRUS STRAIN;

AMINO ACID SEQUENCE; ANIMALS; CAPSID PROTEINS; CHIROPTERA; DISEASE RESERVOIRS; FECES; GENES, VIRAL; GLYCOPROTEINS; HUMANS; KENYA; MOLECULAR SEQUENCE DATA; PHYLOGENY; REASSORTANT VIRUSES; ROTAVIRUS; ROTAVIRUS INFECTIONS; SEQUENCE ALIGNMENT; TOXINS, BIOLOGICAL; VIRAL CORE PROTEINS; VIRAL NONSTRUCTURAL PROTEINS; VIRAL PROTEINS; ZOONOSES;

EID: 78649616186     PISSN: 10806040     EISSN: 10806059     Source Type: Journal    
DOI: 10.3201/eid1612.101089     Document Type: Article

References (40)

1. Ramig RF, Ciarlet M, Mertens PP, Dermody TS. Genus rotavirus. In: Fauquet C, Mayo MA, Maniloff J, Desselberger U, Ball LA, editors. Virus taxonomy: classification and nomenclature of viruses: eighth report of the International Committee on the Taxonomy of Viruses. San Diego (CA): Elsevier Academic Press; 2005. p. 484-96.
2. Parashar UD, Gibson CJ, Bresee JS, Glass RI. Rotavirus and severe childhood diarrhea. Emerg Infect Dis. 2006;12:304-6.
3. Ramig RF. Genetics of the rotaviruses. Annu Rev Microbiol. 1997;51:225-55. DOI: 10.1146/annurev.micro.51.1.225
4. Estes MK, Kapikian A. Rotaviruses In: Knipe DM, Howley PM, Griffin DE, Lamb RA, Martin MA, Roizman B, et al., editors. Fields virology, 5th ed. Philadelphia: Kluwer/Lippincott, Williams and Wilkins; 2007. p. 1917-74.
5. Matthijnssens J, Rahman M, Martella V, Xuelei Y, De Vos S, De Leener K, et al. Full genomic analysis of human rotavirus strain B4106 and lapine rotavirus strain 30/96 provides evidence for interspecies transmission. J Virol. 2006;80:3801-10. DOI: 10.1128/ JVI.80.8.3801-3810.2006
6. Brüssow H, Nakagomi O, Gerna G, Eichhorn W. Isolation of an avian-like group-A rotavirus from a calf with diarrhea. J Clin Microbiol. 1992;30:67-73.
7. Matthijnssens J, Ciarlet M, Heiman E, Arijs I, Delbeke T, McDonald SM, et al. Full genome-based classification of rotaviruses reveals a common origin between human Wa-like and porcine rotavirus strains and human DS-1-like and bovine rotavirus strains. J Virol. 2008;82:3204-19. DOI: 10.1128/JVI.02257-07
8. Martella V, Banyai K, Matthijnssens J, Buonavoglia C, Ciarlet M. Zoonotic aspects of rotaviruses. Vet Microbiol. 2010;140:246-55. DOI: 10.1016/j.vetmic.2009.08.028
9. Matthijnssens J, Bilcke J, Ciarlet M, Martella V, Banyai K, Rahman M, et al. Rotavirus disease and vaccination: impact on genotype diversity. Future Microbiol. 2009;4:1303-16. DOI: 10.2217/ fmb.09.96
10. Matthijnssens J, Ciarlet M, Rahman M, Attoui H, Banyai K, Estes MK, et al. Recommendations for the classification of group A rotaviruses using all 11 genomic RNA segments. Arch Virol. 2008;153:1621-9. DOI: 10.1007/s00705-008-0155-1
11. Calisher CH, Childs JE, Field HE, Holmes KV, Schountz T. Bats: important reservoir hosts of emerging viruses. Clin Microbiol Rev. 2006;19:531-45. DOI: 10.1128/CMR.00017-06
12. Swanepoel R, Leman PA, Burt FJ, Zachariades NA, Braack LE, Ksiazek TG, et al. Experimental inoculation of plants and animals with Ebola virus. Emerg Infect Dis. 1996;2:321-5. DOI: 10.3201/ eid0204.960407
13. Tong S, Conrardy C, Ruone S, Kuzmin IV, Guo XL, Tao Y, et al. Detection of novel SARS-like and other coronaviruses in bats from Kenya. Emerg Infect Dis. 2009;15:482-5. DOI: 10.3201/ eid1503.081013
14. Kuzmin IV, Niezgoda M, Franka R, Agwanda B, Markotter W, Beagley JC, et al. Lagos bat virus in Kenya. J Clin Microbiol. 2008;46:1451-61. DOI: 10.1128/JCM.00016-08
15. Kemp GE, Le Gonidec G, Karabatsos N, Rickenbach A, Cropp CB. IFE: a new African orbivirus isolated from Eidolon helvum bats captured in Nigeria, Cameroon and the Central African Republic [in French]. Bull Soc Pathol Exot Filiales. 1988;81:40-8.
16. Iturriza Gómara M, Wong C, Blome S, Desselberger U, Gray J. Molecular characterization of VP6 genes of human rotavirus isolates: correlation of genogroups with subgroups and evidence of independent segregation. J Virol. 2002;76:6596-601. DOI: 10.1128/ JVI.76.13.6596-6601.2002
17. Das BK, Gentsch JR, Cicirello HG, Woods PA, Gupta A, Ramachandran M, et al. Characterization of rotavirus strains from newborns in New Delhi, India. J Clin Microbiol. 1994;32:1820-2.
18. Gentsch JR, Glass RI, Woods P, Gouvea V, Gorziglia M, Flores J, et al. Identification of group A rotavirus gene 4 types by polymerase chain reaction. J Clin Microbiol. 1992;30:1365-73.
19. Gouvea V, Glass RI, Woods P, Tanguchi K, Clark HF, Forrester B, et al. Polymerase chain reaction amplification and typing of rotavirus nucleic acid from stool specimens. J Clin Microbiol. 1990;28:276-82.
20. Nicholas KB, Nicholas HB. GeneDoc: a tool for editing and annotating multiple sequence alignments, version 2.7.000. Pittsburgh Supercomputing Center's National Resource for Biomedical Supercomputing; 1997 [cited 2010 Sep 2]. http://www.nrbsc.org/downloads/
21. Altschul SF, Madden TL, Schaffer AA, Zhang JH, Zhang Z, Miller W, et al. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 1997;25:3389-402. DOI: 10.1093/nar/25.17.3389
22. Tamura K, Dudley J, Nei M, Kumar S. MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol Biol Evol. 2007;24:1596-9. DOI: 10.1093/molbev/msm092
23. Huelsenbeck JP, Ronquist F. MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics. 2001;17:754-5. DOI: 10.1093/ bioinformatics/17.8.754
24. Ronquist F, Huelsenbeck JP. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics. 2003;19:1572-4. DOI: 10.1093/bioinformatics/btg180
25. Dereeper A, Guignon V, Blanc G, Audic S, Buffet S, Chevenet F, et al. Phylogeny.fr: robust phylogenetic analysis for the non-specialist. Nucleic Acids Res. 2008;36:W465-9. DOI: 10.1093/nar/gkn180
26. Dyall-Smith ML, Lazdins I, Tregear GW, Holmes IH. Location of the major antigenic sites involved in rotavirus serotype-specific neutralization. Proc Natl Acad Sci U S A. 1986;83:3465-8. DOI: 10.1073/pnas.83.10.3465
27. McDonald SM, Aguayo D, Gonzalez-Nilo FD, Patton JT. Shared and group-specific features of the rotavirus RNA polymerase reveal potential determinants of gene reassortment restriction. J Virol. 2009;83:6135-48. DOI: 10.1128/JVI.00409-09
28. Gentsch JR, Laird AR, Bielfelt B, Griffin DD, Banyai K, Ramachandran M, et al. Serotype diversity and reassortment between human and animal rotavirus strains: implications for rotavirus vaccine programs. J Infect Dis. 2005;192:S146-59. DOI: 10.1086/431499
29. Dennehy PH. Rotavirus vaccines: an overview. Clin Microbiol Rev. 2008;21:198-208. DOI: 10.1128/CMR.00029-07
30. Fitzgerald TA, Munoz M, Wood AR, Snodgrass DR. Serological and genomic characterisation of group A rotaviruses from lambs. Arch Virol. 1995;140:1541-8. DOI: 10.1007/BF01322528
31. Gouvea V, Lima RC, Linhares RE, Clark HF, Nosawa CM, Santos N. Identification of two lineages (WA-like and F45-like) within the major rotavirus genotype P [8]. Virus Res. 1999;59:141-7. DOI: 10.1016/S0168-1702(98)00124-5
32. Ulukanligil M, Seyrick A, Asian G, Ozbilge H, Atay S. Environmental pollution with soil-transmitted helminths in Sanliurfa, Turkey. Mem Inst Oswaldo Cruz. 2001;96:903-9. DOI: 10.1590/S0074-02762001000700004
33. Muttalib MA, Huq HM, Huq JA, Suzuki N. Soil pollution with Ascaris eggs in three villages of Bangladesh. In: Yokogawa M, editor. Collected papers on the control of soil-transmitted helminthiasis. Vol. II. Tokyo: APCO; 1983. p. 66-71.
34. Nyarango RM, Kabiru EW, Nyanchongi BO. The risk of pathogenic intestinal parasite infections in Kisii Municipality, Kenya. BMC Public Health. 2008;8:237-43. DOI: 10.1186/1471-2458-8-237
35. Ferreira FF, Guimaraes FR, Fumian TM, Victoria M, Vieira CB, Luz S, et al. Environmental dissemination of group A rotavirus: P-type, G-type and subgroup characterization. Water Sci Technol. 2009;60:633-42. DOI: 10.2166/wst.2009.413
36. Rutjes SA, Lodder WJ, van Leeuwen AD, de Roda Husman AM. Detection of infectious rotavirus in naturally contaminated source waters for drinking water production. J Appl Microbiol. 2009;107:97-105. DOI: 10.1111/j.1365-2672.2009.04184.x
37. Bergmans W. Review of drinking behaviour of African fruit bats (Mammalia: Megachiroptera). Bulletin of the Carnegie Museum of Natural History. 1978;6:20-5.
38. Nagashima S, Kobayashi N, Ishino M, Alam MM, Ahmed MU, Paul SK, et al. Whole genomic characterization of a human rotavirus strain B219 belonging to a novel group of the genus Rotavirus. J Med Virol. 2008;80:2023-33. DOI: 10.1002/jmv.21286
39. Parashar UD, Hummelman EG, Bresee JS, Miller MA, Glass RI. Global illness and deaths caused by rotavirus disease in children. Emerg Infect Dis. 2003;9:565-72.
40. Wildlife Conservation Society. Conference summary. One World One Health: Building Interdisciplinary Bridges to Health in a Globalized World, 2004 [cited 2010 Sep 2]. http://www.oneworldonehealth.org/sept2004/owoh_sept04.html