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Volumn 114, Issue 46, 2010, Pages 15278-15287

Sequence-selective binding of phenazinium dyes phenosafranin and safranin O to guanine-cytosine deoxyribopolynucleotides: Spectroscopic and thermodynamic studies

(3) Saha, Ishita a Hossain, Maidul a Suresh Kumar, Gopinatha a

a INDIAN INSTITUTE OF CHEMICAL BIOLOGY (India)

Author keywords

[No Author keywords available]

Indexed keywords

CALORIMETRY; DIALYSIS; DICHROISM; ENTHALPY; NUCLEIC ACIDS; POSITIVE IONS;

ADENINE-THYMINE; BASE PAIRS; BINDING AFFINITIES; BINDING PROCESS; BINDING REACTIONS; CIRCULAR DICHROISM; DNA BINDING; ENTHALPY CHANGE; FREE ENERGY OF BINDING; GUANINE CYTOSINES; HEAT CAPACITIES; ISOTHERMAL TITRATION; NEGATIVE ENTHALPY; POLYNUCLEOTIDES; SELECTIVE BINDING; SEQUENCE SELECTIVITY; TEMPERATURE DEPENDENCE; THERMAL MELTING; THERMODYNAMIC STUDIES;

BINDING ENERGY;

EID: 78649531767 PISSN: 15206106 EISSN: 15205207 Source Type: Journal
DOI: 10.1021/jp1064598 Document Type: Article

Times cited : (49)

References (69)

1
- 0019364861
- Waring, M. J. Annu. Rev. Biochem. 1981, 50, 159-192
- (1981) Annu. Rev. Biochem. , vol.50 , pp. 159-192
- Waring, M.J.¹

2
- 0035206465
- Hurley, L. H. Biochem. Soc. Trans. 2001, 29, 692-696
- (2001) Biochem. Soc. Trans. , vol.29 , pp. 692-696
- Hurley, L.H.¹

3
- 0036519363
- Hurley, L. H. Nature Rev. 2002, 2, 188-200
- (2002) Nature Rev. , vol.2 , pp. 188-200
- Hurley, L.H.¹

4
- 11844291970
- Martines, R.; Chacon-Garcia, L. Curr. Med. Chem. 2005, 12, 127-151
- (2005) Curr. Med. Chem. , vol.12 , pp. 127-151
- Martines, R.¹ Chacon-Garcia, L.²

5
- 37549056566
- Palchaudhuri, R.; Hergenrother, P. J. Curr. Opin. Biotechnol. 2007, 18, 497-503
- (2007) Curr. Opin. Biotechnol. , vol.18 , pp. 497-503
- Palchaudhuri, R.¹ Hergenrother, P.J.²

6
- 34548024885
- Maiti, M.; Suresh Kumar, G. Med. Res. Rev. 2007, 27, 649-695
- (2007) Med. Res. Rev. , vol.27 , pp. 649-695
- Maiti, M.¹ Suresh Kumar, G.²

7
- 61949281323
- Dufff, M. R., Jr.; Mudhivarthi, V. K.; Kumar, C. V. J. Phys. Chem. B 2009, 113, 1710-1721
- (2009) J. Phys. Chem. B , vol.113 , pp. 1710-1721
- Dufff, Jr.M.R.¹ Mudhivarthi, V.K.² Kumar, C.V.³

8
- 0032576722
- White, S.; Szewczyk, J. W.; Turner, J. M.; Baird, E. E.; Dervan, P. B. Nature 1998, 391, 468-471
- (1998) Nature , vol.391 , pp. 468-471
- White, S.¹ Szewczyk, J.W.² Turner, J.M.³ Baird, E.E.⁴ Dervan, P.B.⁵

9
- 0034830898
- Dervan, P. B. Bioorg. Med. Chem. 2001, 9, 2215-2235
- (2001) Bioorg. Med. Chem. , vol.9 , pp. 2215-2235
- Dervan, P.B.¹

10
- 0032824383
- Reddy, B. S. P.; Sondhi, S. M.; Lown, J. W. Pharmacol. Ther. 1999, 84, 1-111
- (1999) Pharmacol. Ther. , vol.84 , pp. 1-111
- Reddy, B.S.P.¹ Sondhi, S.M.² Lown, J.W.³

11
- 20444395811
- Broglia, M. F.; Gomez, M. L.; Bertolotti, S. G.; Montejano, H. A.; Previtali, C. M. J. Photochem. Photobiol. A 2005, 173, 115-120
- (2005) J. Photochem. Photobiol. A , vol.173 , pp. 115-120
- Broglia, M.F.¹ Gomez, M.L.² Bertolotti, S.G.³ Montejano, H.A.⁴ Previtali, C.M.⁵

12
- 0001597509
- Gopidas, K. R.; Kamat, P. V. J. Phys. Chem. 1990, 94, 4723-4727
- (1990) J. Phys. Chem. , vol.94 , pp. 4723-4727
- Gopidas, K.R.¹ Kamat, P.V.²

13
- 0030783486
- Jokush, S.; Timpe, H. J.; Schnabel, W.; Turro, N. J. J. Phys. Chem. A 1997, 101, 440-445
- (1997) J. Phys. Chem. A , vol.101 , pp. 440-445
- Jokush, S.¹ Timpe, H.J.² Schnabel, W.³ Turro, N.J.⁴

14
- 33748665023
- Jayanthi, S. S.; Ramamurthy, P. J. Chem. Soc., Faraday Trans 1998, 94, 1675-1680
- (1998) J. Chem. Soc., Faraday Trans , vol.94 , pp. 1675-1680
- Jayanthi, S.S.¹ Ramamurthy, P.²

15
- 77957906427
- Niu, X. L.; Sun, W.; Jiao, K. Russ. J. Electrochem. 2009, 45, 967-971
- (2009) Russ. J. Electrochem. , vol.45 , pp. 967-971
- Niu, X.L.¹ Sun, W.² Jiao, K.³

16
- 77957890771
- Priya, P. L.; Shanmughavel, P. Bioinformation 2009, 4, 123-126
- (2009) Bioinformation , vol.4 , pp. 123-126
- Priya, P.L.¹ Shanmughavel, P.²

17
- 33646770630
- Sun, W.; You, J.; Hu, X.; Jia, K. Anal. Sci. 2006, 22, 691-696
- (2006) Anal. Sci. , vol.22 , pp. 691-696
- Sun, W.¹ You, J.² Hu, X.³ Jia, K.⁴

18
- 31544439171
- Gao, F.; Zhang, L.; Bian, G. R.; Wang, L. Spectrosc. Lett. 2006, 39, 73-84
- (2006) Spectrosc. Lett. , vol.39 , pp. 73-84
- Gao, F.¹ Zhang, L.² Bian, G.R.³ Wang, L.⁴

19
- 77749268355
- Huang, H. Y.; Wang, C. M. J. Phys. Chem C 2010, 114, 3560-3567
- (2010) J. Phys. Chem C , vol.114 , pp. 3560-3567
- Huang, H.Y.¹ Wang, C.M.²

20
- 71649094716
- Bose, D.; Ghosh, D.; Das, P.; Girigoswami, A.; Sarkar, D.; Chattopadhyay, N. Chem. Phys. Lipids 2010, 163, 94-101
- (2010) Chem. Phys. Lipids , vol.163 , pp. 94-101
- Bose, D.¹ Ghosh, D.² Das, P.³ Girigoswami, A.⁴ Sarkar, D.⁵ Chattopadhyay, N.⁶

21
- 0018401167
- Balcarove, Z.; Kleinwatcher, Z.; Lober, G.; Luck, G.; Zimmer, C.; Klarner, R.; Smekal, E. Biophys. Chem. 1979, 9, 121-131
- (1979) Biophys. Chem. , vol.9 , pp. 121-131
- Balcarove, Z.¹ Kleinwatcher, Z.² Lober, G.³ Luck, G.⁴ Zimmer, C.⁵ Klarner, R.⁶ Smekal, E.⁷

22
- 36048941459
- Das, S.; Suresh Kumar, G. J. Mol. Struct. 2008, 872, 56-63
- (2008) J. Mol. Struct. , vol.872 , pp. 56-63
- Das, S.¹ Suresh Kumar, G.²

23
- 77957905013
- Saha, I.; Hossain, M.; Suresh Kumar, G. Phys. Chem. Chem. Phys. 2010, 12, 12771-12779
- (2010) Phys. Chem. Chem. Phys. , vol.12 , pp. 12771-12779
- Saha, I.¹ Hossain, M.² Suresh Kumar, G.³

24
- 49349105052
- Sarkar, D.; Das, P.; Basak, S.; Chattopadhyay, N. J. Phys. Chem. B 2008, 112, 9243-9249
- (2008) J. Phys. Chem. B , vol.112 , pp. 9243-9249
- Sarkar, D.¹ Das, P.² Basak, S.³ Chattopadhyay, N.⁴

25
- 0013787912
- Eigner, J.; Doty, P. J. Mol. Biol. 1968, 12, 549-580
- (1968) J. Mol. Biol. , vol.12 , pp. 549-580
- Eigner, J.¹ Doty, P.²

26
- 84984088862
- Cohen, G.; Eisnbers, H. Biopolymers 1969, 8, 45-69
- (1969) Biopolymers , vol.8 , pp. 45-69
- Cohen, G.¹ Eisnbers, H.²

27
- 0019941688
- Maiti, M.; Nandi, R.; Chowdhuri, K. FEBS Lett. 1982, 142, 280-284
- (1982) FEBS Lett. , vol.142 , pp. 280-284
- Maiti, M.¹ Nandi, R.² Chowdhuri, K.³

28
- 70349973209
- Hossain, M.; Suresh Kumar, G. Mol. BioSystems 2009, 5, 1311-1322
- (2009) Mol. BioSystems , vol.5 , pp. 1311-1322
- Hossain, M.¹ Suresh Kumar, G.²

29
- 61949239352
- Islam, M. M.; Roy Chowdhury, S.; Suresh Kumar, G. J. Phys. Chem. B 2009, 113, 1210-1224
- (2009) J. Phys. Chem. B , vol.113 , pp. 1210-1224
- Islam, M.M.¹ Roy Chowdhury, S.² Suresh Kumar, G.³

30
- 0016175370
- McGhee, J. D.; von Hippel, P. H. J. Mol. Biol. 1974, 86, 469-489
- (1974) J. Mol. Biol. , vol.86 , pp. 469-489
- McGhee, J.D.¹ Von Hippel, P.H.²

31
- 70349665346
- Sinha, R.; Suresh Kumar, G. J. Phys. Chem. B 2009, 113, 13410-13420
- (2009) J. Phys. Chem. B , vol.113 , pp. 13410-13420
- Sinha, R.¹ Suresh Kumar, G.²

32
- 60649106752
- Islam, M. M.; Pandya, P.; Kumar, S.; Suresh Kumar, G. Mol. BioSystems 2009, 5, 244-254
- (2009) Mol. BioSystems , vol.5 , pp. 244-254
- Islam, M.M.¹ Pandya, P.² Kumar, S.³ Suresh Kumar, G.⁴

33
- 0033534146
- Ren, J.; Chaires, J. B. Biochemistry 1999, 38, 16067-16075
- (1999) Biochemistry , vol.38 , pp. 16067-16075
- Ren, J.¹ Chaires, J.B.²

34
- 22144448571
- Chaires, J. B. Curr. Med. Chem.-Anti Cancer Agents 2005, 5, 339-352
- (2005) Curr. Med. Chem.-Anti Cancer Agents , vol.5 , pp. 339-352
- Chaires, J.B.¹

35
- 44149108423
- Giri, P.; Suresh Kumar, G. Arch. Biochem. Biophys. 2008, 474, 183-192
- (2008) Arch. Biochem. Biophys. , vol.474 , pp. 183-192
- Giri, P.¹ Suresh Kumar, G.²

36
- 33748595282
- Scidel, C. A. M.; Schultz, A.; Saueer, M. H. M. J. Phys. Chem. 1996, 100, 5541-5553
- (1996) J. Phys. Chem. , vol.100 , pp. 5541-5553
- Scidel, C.A.M.¹ Schultz, A.² Saueer, M.H.M.³

37
- 0034823017
- Reid, G. D.; Whittaker, D. J.; Day, M. A.; Creely, C. M.; Tuite, E. M.; Kelly, J. M.; Beddard, G. S. J. Am. Chem. Soc. 2001, 123, 6953-6954
- (2001) J. Am. Chem. Soc. , vol.123 , pp. 6953-6954
- Reid, G.D.¹ Whittaker, D.J.² Day, M.A.³ Creely, C.M.⁴ Tuite, E.M.⁵ Kelly, J.M.⁶ Beddard, G.S.⁷

38
- 0041624411
- Dohno, C.; Stemp, E. D. A.; Barton, J. K. J. Am. Chem. Soc. 2003, 125, 9586-9587
- (2003) J. Am. Chem. Soc. , vol.125 , pp. 9586-9587
- Dohno, C.¹ Stemp, E.D.A.² Barton, J.K.³

39
- 0027656390
- Doglia, S. M.; Albinsson, B.; Hiort, C.; Norden, B.; Graslund, A. Biopolymers 1993, 33, 1431-1442
- (1993) Biopolymers , vol.33 , pp. 1431-1442
- Doglia, S.M.¹ Albinsson, B.² Hiort, C.³ Norden, B.⁴ Graslund, A.⁵

40
- 0026039178
- Dunn, D.; Lin, V.; Kochevar, J. Photochem. Photobiol. 1991, 53, 47-56
- (1991) Photochem. Photobiol. , vol.53 , pp. 47-56
- Dunn, D.¹ Lin, V.² Kochevar, J.³

41
- 0347269083
- Maheswari, P. U.; Palaniandavar, M. J. Inorg. Biochem. 2004, 98, 219-230
- (2004) J. Inorg. Biochem. , vol.98 , pp. 219-230
- Maheswari, P.U.¹ Palaniandavar, M.²

42
- 0028104651
- Larsson, A.; Carlsson, C.; Jonsson, M.; Albinsson, B. J. Am. Chem. Soc. 1994, 116, 8459-8465
- (1994) J. Am. Chem. Soc. , vol.116 , pp. 8459-8465
- Larsson, A.¹ Carlsson, C.² Jonsson, M.³ Albinsson, B.⁴

43
- 0004040064
- Plenum Press: New York
- Lakowicz, J. R. Principles of Fluorescence Spectroscopy; Plenum Press: New York, 1983; p 257.
- (1983) Principles of Fluorescence Spectroscopy , pp. 257
- Lakowicz, J.R.¹

44
- 37049076176
- Kumar, C. V.; Asuncion, E. H. J. Chem. Soc., Chem. Commun. 1992, 6, 470-472
- (1992) J. Chem. Soc., Chem. Commun. , vol.6 , pp. 470-472
- Kumar, C.V.¹ Asuncion, E.H.²

45
- 0027538012
- Satyanarayana, S.; Dabrowiak, J. C.; Chaires, J. B. Biochemistry 1993, 32, 2573-2584
- (1993) Biochemistry , vol.32 , pp. 2573-2584
- Satyanarayana, S.¹ Dabrowiak, J.C.² Chaires, J.B.³

46
- 85048645035
- Lerman, L. S. J. Mol. Biol. 1961, 3, 18-30
- (1961) J. Mol. Biol. , vol.3 , pp. 18-30
- Lerman, L.S.¹

47
- 0015153612
- Crothers, D. M. Biopolymers 1971, 10, 2147-2160
- (1971) Biopolymers , vol.10 , pp. 2147-2160
- Crothers, D.M.¹

48
- 0001511660
- Job, P. Ann. Chim. 1928, 9, 113-203
- (1928) Ann. Chim. , vol.9 , pp. 113-203
- Job, P.¹

49
- 0020440236
- Huang, C. Y. Methods Enzymol. 1982, 27, 509-525
- (1982) Methods Enzymol. , vol.27 , pp. 509-525
- Huang, C.Y.¹

50
- 0022427469
- Wilson, W. D.; Wang, Y. H.; Krishnamoorthy, C. R.; Smith, J. C. Biochemistry 1985, 24, 3991-3999
- (1985) Biochemistry , vol.24 , pp. 3991-3999
- Wilson, W.D.¹ Wang, Y.H.² Krishnamoorthy, C.R.³ Smith, J.C.⁴

51
- 0023164663
- Alexeev, D. G.; Lipanov, A. A.; Skuratovskii, I. Y. Nature 1987, 325, 821-823
- (1987) Nature , vol.325 , pp. 821-823
- Alexeev, D.G.¹ Lipanov, A.A.² Skuratovskii, I.Y.³

52
- 0025194402
- Marky, L. A.; MacGregor, R. B., Jr. Biochemistry 1990, 29, 4805-4811
- (1990) Biochemistry , vol.29 , pp. 4805-4811
- Marky, L.A.¹ MacGregor, Jr.R.B.²

53
- 0024589495
- Herrera, J. E.; Chaires, J. B. Biochemistry 1989, 28, 1993-2000
- (1989) Biochemistry , vol.28 , pp. 1993-2000
- Herrera, J.E.¹ Chaires, J.B.²

54
- 34247631618
- Bhadra, K.; Maiti, M.; Suresh Kumar, G. Biochim. Biophys. Acta 2007, 1770, 1071-1080
- (2007) Biochim. Biophys. Acta , vol.1770 , pp. 1071-1080
- Bhadra, K.¹ Maiti, M.² Suresh Kumar, G.³

55
- 0020516246
- Chaires, J. B. Biochemistry 1983, 22, 4204-4211
- (1983) Biochemistry , vol.22 , pp. 4204-4211
- Chaires, J.B.¹

56
- 0023473988
- Breslauer, K. J.; Remeta, D. P.; Chou, W. Y.; Ferrante, R.; Curry, J.; Zaunczkowski, D.; Snyder, J. G.; Marky, L. A. Proc. Natl. Acad. Sci. U.S.A. 1987, 84, 8922-8926
- (1987) Proc. Natl. Acad. Sci. U.S.A. , vol.84 , pp. 8922-8926
- Breslauer, K.J.¹ Remeta, D.P.² Chou, W.Y.³ Ferrante, R.⁴ Curry, J.⁵ Zaunczkowski, D.⁶ Snyder, J.G.⁷ Marky, L.A.⁸

57
- 33646156870
- Shi, X.; Macgregor, R. B., Jr. Biophys. J. 2006, 90, 1729-1738
- (2006) Biophys. J. , vol.90 , pp. 1729-1738
- Shi, X.¹ MacGregor, Jr.R.B.²

58
- 33846621126
- Freyer, M. W.; Buscaglia, R.; Cashman, D.; Hyslop, S.; Wilson, W. D.; Chaires, J. B.; Lewis, E. A. Biophys. Chem. 2007, 126, 186-196
- (2007) Biophys. Chem. , vol.126 , pp. 186-196
- Freyer, M.W.¹ Buscaglia, R.² Cashman, D.³ Hyslop, S.⁴ Wilson, W.D.⁵ Chaires, J.B.⁶ Lewis, E.A.⁷

59
- 0017820499
- Record, M. T., Jr.; Anderson, C. F.; Lohman, T. M. Q. Rev. Biophys. 1978, 11, 103-178
- (1978) Q. Rev. Biophys. , vol.11 , pp. 103-178
- Record, Jr.M.T.¹ Anderson, C.F.² Lohman, T.M.³

60
- 0030465221
- Chaires, J. B. Anti-Cancer Drug Des. 1996, 11, 569-580
- (1996) Anti-Cancer Drug Des. , vol.11 , pp. 569-580
- Chaires, J.B.¹

61
- 4143080522
- Chaires, J. B. Biopolymers 1998, 44, 201-215
- (1998) Biopolymers , vol.44 , pp. 201-215
- Chaires, J.B.¹

62
- 0034655961
- Murphy, F. V.; Churchill, M. E. Structure 2000, 15, R83-R89
- (2000) Structure , vol.15
- Murphy, F.V.¹ Churchill, M.E.²

63
- 0034713855
- Ren, J.; Jenkins, T. C.; Chaires, J. B. Biochemistry 2000, 39, 8439-8447
- (2000) Biochemistry , vol.39 , pp. 8439-8447
- Ren, J.¹ Jenkins, T.C.² Chaires, J.B.³

64
- 0036647051
- Haq, I. Arch. Biochem. Biophys. 2002, 403, 1-15
- (2002) Arch. Biochem. Biophys. , vol.403 , pp. 1-15
- Haq, I.¹

65
- 33846599391
- Guthrie, K. M.; Parenty, A. D. C.; Smith, L. V.; Cronin, L.; Cooper, A. Biophys. Chem 2007, 126, 117-123
- (2007) Biophys. Chem , vol.126 , pp. 117-123
- Guthrie, K.M.¹ Parenty, A.D.C.² Smith, L.V.³ Cronin, L.⁴ Cooper, A.⁵

66
- 77953870360
- Hossain, M.; Suresh Kumar, G. J. Chem. Thermodyn. 2010, 42, 1273-1280
- (2010) J. Chem. Thermodyn. , vol.42 , pp. 1273-1280
- Hossain, M.¹ Suresh Kumar, G.²

67
- 77953594301
- Roy Chowdhury, S.; Islam, M. M.; Suresh Kumar, G. Mol. BioSystems 2010, 6, 1265-1276
- (2010) Mol. BioSystems , vol.6 , pp. 1265-1276
- Roy Chowdhury, S.¹ Islam, M.M.² Suresh Kumar, G.³

68
- 33750979299
- Buchmueller, K. L.; Bailey, S. L.; Matthews, D. A.; Taherbhai, D. A.; Register, J. K.; Davis, Z. S.; Bruce, C. D.; O'Hare, C.; Hartley, J. A.; Lee, M. Biochemistry 2006, 45, 13551-13565
- (2006) Biochemistry , vol.45 , pp. 13551-13565
- Buchmueller, K.L.¹ Bailey, S.L.² Matthews, D.A.³ Taherbhai, D.A.⁴ Register, J.K.⁵ Davis, Z.S.⁶ Bruce, C.D.⁷ O'Hare, C.⁸ Hartley, J.A.⁹ Lee, M.¹⁰

69
- 33645768556
- Nguyen, B.; Stanek, J.; Wilson, W. D. Biophys. J. 2006, 90, 1319-1328
- (2006) Biophys. J. , vol.90 , pp. 1319-1328
- Nguyen, B.¹ Stanek, J.² Wilson, W.D.³

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