메뉴 건너뛰기




Volumn 11, Issue 8, 1996, Pages 569-580

Dissecting the free energy of drug binding to DNA

Author keywords

[No Author keywords available]

Indexed keywords

CATION; LIGAND; POLYELECTROLYTE;

EID: 0030465221     PISSN: 02669536     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Review
Times cited : (102)

References (31)
  • 4
    • 0027295656 scopus 로고
    • Dissection of the free energy of anthracycline antibiotic binding to DNA: Electrostatic contributions
    • CHAIRES. J B, PRIEBE, W, GRAVES, D E & BURKE, TG. (1993). Dissection of the free energy of anthracycline antibiotic binding to DNA: electrostatic contributions. Journal of the American Chemistry Society, 115, 5360.
    • (1993) Journal of the American Chemistry Society , vol.115 , pp. 5360
    • Chaires, J.B.1    Priebe, W.2    Graves, D.E.3    Burke, T.G.4
  • 5
    • 0028674284 scopus 로고
    • Analysis of drug-DNA binding isotherms: A Monte Carlo approach
    • CORREIA, J J & CHAIRES, J B (1994). Analysis of drug-DNA binding isotherms: a Monte Carlo approach. Methods in Enzymology, 240, 593.
    • (1994) Methods in Enzymology , vol.240 , pp. 593
    • Correia, J.J.1    Chaires, J.B.2
  • 6
    • 0021689084 scopus 로고
    • Polyelectrolyte effects on site-binding equilibria with application to the intercalation of drugs into DNA
    • FRIEDMAN R.A G & MANNING, G S (1984). Polyelectrolyte effects on site-binding equilibria with application to the intercalation of drugs into DNA. Biopolymers, 23, 2671.
    • (1984) Biopolymers , vol.23 , pp. 2671
    • Friedman, R.A.G.1    Manning, G.S.2
  • 7
    • 12644309841 scopus 로고
    • The polyclectrolyte correction to site exclusion numbers in drug-DNA binding
    • Kallenbach, N.R., (Ed.). Adenine Press, Schenectady, NY
    • FRIEDMAN, R A.G., MANNING, G.S & SHAHIN, M A (1990). The polyclectrolyte correction to site exclusion numbers in drug-DNA binding. In Kallenbach, N.R., (Ed.). Chemistry and Physics of DNA-Ligand Interactions. Adenine Press, Schenectady, NY, pp. 37ff.
    • (1990) Chemistry and Physics of DNA-Ligand Interactions
    • Friedman, R.A.G.1    Manning, G.S.2    Shahin, M.A.3
  • 8
    • 0344843975 scopus 로고
    • Physico-chemical studies on anthracycline-DNA interactions: Analysis of equilibrium, kinetic and structural data
    • Kallenbach, N.R. (ed.), Adenine Press, Schenectady, NY
    • FRITZSCHE, H. & WALTER, A. (1990). Physico-chemical studies on anthracycline-DNA interactions: analysis of equilibrium, kinetic and structural data. In Kallenbach, N.R. (ed.), Chemistry and Physics of DNA-Ligand Interactions. Adenine Press, Schenectady, NY, pp. 1ff.
    • (1990) Chemistry and Physics of DNA-Ligand Interactions
    • Fritzsche, H.1    Walter, A.2
  • 10
    • 0022573212 scopus 로고
    • Kinetics of protein-nucleic acid interactions: Use of salt effects to probe mechanism of interaction
    • LOHMAN, T.M. (1985). Kinetics of protein-nucleic acid interactions: use of salt effects to probe mechanism of interaction. CRC Critical Reviews in Biochemistry, 19, 191.
    • (1985) CRC Critical Reviews in Biochemistry , vol.19 , pp. 191
    • Lohman, T.M.1
  • 11
    • 0026793123 scopus 로고
    • Nonspecific ligand-DNA equilibrium binding parameters determined by fluorescence methods
    • LOHMAN, T.M. & MASCOTTI, D.P. (1992a). Nonspecific ligand-DNA equilibrium binding parameters determined by fluorescence methods. Methods in Enzymology, 212, 424.
    • (1992) Methods in Enzymology , vol.212 , pp. 424
    • Lohman, T.M.1    Mascotti, D.P.2
  • 12
    • 0026808625 scopus 로고
    • Thermodynamics of ligand-DNA interactions
    • LOHMAN, T.M. & MASCOTTI, D P (1992b). Thermodynamics of ligand-DNA interactions. Methods in Enzymology, 212, 400.
    • (1992) Methods in Enzymology , vol.212 , pp. 400
    • Lohman, T.M.1    Mascotti, D.P.2
  • 14
    • 0017895903 scopus 로고
    • The molecular theory of polyelectrolyte solutions with applications to the electrostatic properties of polynucleotides
    • MANNING, G S. (1978). The molecular theory of polyelectrolyte solutions with applications to the electrostatic properties of polynucleotides. Quarterly Review of Biophysics, 11, 179.
    • (1978) Quarterly Review of Biophysics , vol.11 , pp. 179
    • Manning, G.S.1
  • 15
    • 0000541402 scopus 로고
    • Counterion binding in polyelectrolyte theory
    • MANNING, G.S. (1979). Counterion binding in polyelectrolyte theory. Accounts of Chemical Research, 12, 443.
    • (1979) Accounts of Chemical Research , vol.12 , pp. 443
    • Manning, G.S.1
  • 16
    • 0014433052 scopus 로고
    • Studies of the binding of actinomycin and related compounds to DNA
    • MUELLER, w & CROTHERS, D M. (1968). Studies of the binding of actinomycin and related compounds to DNA. Journal of Molecular Biology, 35, 251.
    • (1968) Journal of Molecular Biology , vol.35 , pp. 251
    • Mueller, W.1    Crothers, D.M.2
  • 17
    • 0009658541 scopus 로고
    • Cation-DNA interactions: NMR and theoretical studies of ion distributions and dynamics
    • Pasternak, C.A. (ed.), CRC Press, Boca Raton, FL, Chap. 14
    • PADMANABHAN, S., PAULSEN, M., ANDERSON, C F. & RECORD, M T., JR (1990). Cation-DNA interactions: NMR and theoretical studies of ion distributions and dynamics. In Pasternak, C.A. (ed.), Monovalent Cations in Biological Systems. CRC Press, Boca Raton, FL, Chap. 14.
    • (1990) Monovalent Cations in Biological Systems
    • Padmanabhan, S.1    Paulsen, M.2    Anderson, C.F.3    Record Jr., M.T.4
  • 18
    • 0002304026 scopus 로고
    • Some thermodynamic principles of nonspecific and site-specific protein-DNA interactions
    • Revzin, A. (ed.), CRC Press, Boca Raton, FL, Chap. 2
    • RECORD, M.T., JR. & SPOLAR, R (1990). Some thermodynamic principles of nonspecific and site-specific protein-DNA interactions. In Revzin, A. (ed.), The Biology of Nonspecific DNA-Protein Interactions. CRC Press, Boca Raton, FL, Chap. 2.
    • (1990) The Biology of Nonspecific DNA-Protein Interactions
    • Record Jr., M.T.1    Spolar, R.2
  • 19
    • 0017820499 scopus 로고
    • Thermodynamic analysis of ion effects on the binding and conformational equilibria of proteins and nucleic acids: The roles of ion association or release, screening, and ion effects on water activity
    • RECORD, M.T, JR., ANDERSON, C.F & LOHMAN, T M (1978). Thermodynamic analysis of ion effects on the binding and conformational equilibria of proteins and nucleic acids: the roles of ion association or release, screening, and ion effects on water activity. Quarterly Review of Biophysics, 11, 103.
    • (1978) Quarterly Review of Biophysics , vol.11 , pp. 103
    • Record Jr., M.T.1    Anderson, C.F.2    Lohman, T.M.3
  • 22
    • 0026323912 scopus 로고
    • Analysis of equilibrium and kinetic measurements to determine thermodynamic origins of stability and specificity and mechanism of formation of site-specific complexes between proteins and helical DNA
    • RECORD. M T, JR., HA. J-H. & FISHER, M.A (1991). Analysis of equilibrium and kinetic measurements to determine thermodynamic origins of stability and specificity and mechanism of formation of site-specific complexes between proteins and helical DNA. Methods in Enzymology, 208, 291.
    • (1991) Methods in Enzymology , vol.208 , pp. 291
    • Record Jr., M.T.1    Ha, J.-H.2    Fisher, M.A.3
  • 23
    • 0004417187 scopus 로고
    • Theoretical studies of the thermodynamic consequences of interactions of ions with polymeric and oligomeric DNA: The preferential interaction coefficient and its application to the thermodynamic analysis of electrolyte effects on conformational stability and ligand binding
    • Beveridge, D. L & Lavery, R. (eds), Adenine Press, Schenectady, NY
    • RECORD. M T., JR, OLMSTED, M & ANDERSON, C F. (1991). Theoretical studies of the thermodynamic consequences of interactions of ions with polymeric and oligomeric DNA: the preferential interaction coefficient and its application to the thermodynamic analysis of electrolyte effects on conformational stability and ligand binding. In Beveridge, D. L & Lavery, R. (eds), Theoretical Biochemistry and Molecular Biophysics. Adenine Press, Schenectady, NY, pp. 285ff.
    • (1991) Theoretical Biochemistry and Molecular Biophysics
    • Record Jr., M.T.1    Olmsted, M.2    Anderson, C.F.3
  • 24
    • 0026786133 scopus 로고
    • Neither Δ- Nor Δ-tris(phenanthroline)-ruthenium(II) binds to DNA by classical intercalation
    • SATYANARAYANA, S. DABROWIAK, J C. & CHAIRES, J B. (1992). Neither Δ- nor Δ-tris(phenanthroline)-ruthenium(II) binds to DNA by classical intercalation. Biochemistry, 31, 9319.
    • (1992) Biochemistry , vol.31 , pp. 9319
    • Satyanarayana, S.1    Dabrowiak, J.C.2    Chaires, J.B.3
  • 25
    • 0028589303 scopus 로고
    • Analysis of the thermodynamic linkage of DNA binding and ion binding for dimeric and tetrameric forms of the lac repressor
    • STSCKLE, D F, LIU, G, & FRIED, M G (1994). Analysis of the thermodynamic linkage of DNA binding and ion binding for dimeric and tetrameric forms of the lac repressor. European Journal of Biochemistry, 226, 869.
    • (1994) European Journal of Biochemistry , vol.226 , pp. 869
    • Stsckle, D.F.1    Liu, G.2    Fried, M.G.3
  • 26
    • 5544259061 scopus 로고
    • Structure-activity studies of anthracycline-DNA complexes
    • Neidle, S. & Waring, M. (eds), CRC Press, Boca Raton, FL, Chap. 2
    • WANG, A.H-J. (1993). Structure-activity studies of anthracycline-DNA complexes. In Neidle, S. & Waring, M. (eds), Molecular Aspects of Anticancer Drug-DNA Interactions. CRC Press, Boca Raton, FL, Vol. 1, Chap. 2.
    • (1993) Molecular Aspects of Anticancer Drug-DNA Interactions , vol.1
    • Wang, A.H.-J.1
  • 27
    • 0018618548 scopus 로고
    • Analysis of cooperativity and ion effects in the interaction of quinacrine with DNA
    • WILSON, W D & LOPP, I.G. (1979). Analysis of cooperativity and ion effects in the interaction of quinacrine with DNA. Biopolymers, 18, 3025.
    • (1979) Biopolymers , vol.18 , pp. 3025
    • Wilson, W.D.1    Lopp, I.G.2
  • 28
    • 0000691755 scopus 로고
    • Kinetic analysis of drug-nucleic acid binding modes: Absolute rates and effects of salt concentration
    • Neidle, S. & Waring, M. (eds), CRC Press, Boca Raton, FL, Chap. 6
    • WILSON, W.D &TAINOUS, F A (1994). Kinetic analysis of drug-nucleic acid binding modes: absolute rates and effects of salt concentration. In Neidle, S. & Waring, M. (eds), Molecular Aspects of Anticancer Drug-DNA Interactions. CRC Press, Boca Raton, FL, Vol. 2, Chap. 6.
    • (1994) Molecular Aspects of Anticancer Drug-DNA Interactions , vol.2
    • Wilson, W.D.1    Tainous, F.A.2
  • 29
    • 0022406278 scopus 로고
    • Mechanism of intercalation: Ion effects on the equilibrium and kinetic constants for the interaction of propidium and ethidium with DNA
    • WILSON, W.D., KRISNAMOORTHY, C.R., WANG, Y.-H & SMITH, J.C. (1985). Mechanism of intercalation: ion effects on the equilibrium and kinetic constants for the interaction of propidium and ethidium with DNA. Biopolymers, 24, 1941.
    • (1985) Biopolymers , vol.24 , pp. 1941
    • Wilson, W.D.1    Krisnamoorthy, C.R.2    Wang, Y.-H.3    Smith, J.C.4
  • 30
    • 0019857961 scopus 로고
    • Equilibrium binding of carcinogens and antitumor antibiotics to DNA: Site selectivity, cooperativity, allosterism
    • WINKLE, S.A. & KRUGH, T.R. (1981). Equilibrium binding of carcinogens and antitumor antibiotics to DNA: site selectivity, cooperativity, allosterism. Nucleic Acids Research, 9, 3175.
    • (1981) Nucleic Acids Research , vol.9 , pp. 3175
    • Winkle, S.A.1    Krugh, T.R.2
  • 31
    • 67650040559 scopus 로고
    • Linked functions and reciprocal effects in hemoglobin: A second look
    • WYMAN, J (1964). Linked functions and reciprocal effects in hemoglobin: a second look. Advances in Protein Chemistry, 19, 223.
    • (1964) Advances in Protein Chemistry , vol.19 , pp. 223
    • Wyman, J.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.