메뉴 건너뛰기




Volumn 2, Issue 5, 2008, Pages 244-250

Making connections for life: An in vivo map of the yeast interactome

Author keywords

[No Author keywords available]

Indexed keywords

SACCHAROMYCES CEREVISIAE;

EID: 78649239734     PISSN: 19552068     EISSN: 1955205X     Source Type: Journal    
DOI: 10.2976/1.2969243     Document Type: Article
Times cited : (3)

References (28)
  • 1
    • 33644550021 scopus 로고    scopus 로고
    • Structural systems biology: Modeling protein interactions
    • Aloy, P, and Russell, RB (2006). "Structural systems biology: modeling protein interactions." Nat. Rev. Mol. Cell Biol. 7, 188-197.
    • (2006) Nat. Rev. Mol. Cell Biol , vol.7 , pp. 188-197
    • Aloy, P.1    Russell, R.B.2
  • 2
    • 0037106398 scopus 로고    scopus 로고
    • Identification and relative quantitation of protein mixtures by enzymatic digestion followed by capillary reversed-phase liquid chromatography-tandem mass spectrometry
    • Bondarenko, PV, Chelius, D, and Shaler, TA (2002). "Identification and relative quantitation of protein mixtures by enzymatic digestion followed by capillary reversed-phase liquid chromatography-tandem mass spectrometry." Anal. Chem. 74, 4741-4749.
    • (2002) Anal. Chem , vol.74 , pp. 4741-4749
    • Bondarenko, P.V.1    Chelius, D.2    Shaler, T.A.3
  • 4
    • 30744464873 scopus 로고    scopus 로고
    • Insulin-dependent interactions of proteins with GLUT4 revealed through stable isotope labeling by amino acids in cell culture (SILAC)
    • Foster, LJ, Rudich, A, Talior, I, Patel, N, Huang, X, Furtado, LM, Bilan, PJ, Mann, M, and Klip, A (2006). "Insulin-dependent interactions of proteins with GLUT4 revealed through stable isotope labeling by amino acids in cell culture (SILAC)." J. Proteome Res. 5, 64-75.
    • (2006) J. Proteome Res , vol.5 , pp. 64-75
    • Foster, L.J.1    Rudich, A.2    Talior, I.3    Patel, N.4    Huang, X.5    Furtado, L.M.6    Bilan, P.J.7    Mann, M.8    Klip, A.9
  • 7
    • 0037795741 scopus 로고    scopus 로고
    • Absolute quantification of proteins and phosphoproteins from cell lysates by tandem MS
    • Gerber, SA, Rush, J, Stemman, O, Kirschner, MW, and Gygi, SP (2003). "Absolute quantification of proteins and phosphoproteins from cell lysates by tandem MS." Proc. Natl. Acad. Sci. U.S.A. 100, 6940-6945.
    • (2003) Proc. Natl. Acad. Sci. U.S.A , vol.100 , pp. 6940-6945
    • Gerber, S.A.1    Rush, J.2    Stemman, O.3    Kirschner, M.W.4    Gygi, S.P.5
  • 8
    • 33644670152 scopus 로고    scopus 로고
    • An integrated mass spectrometry-based proteomic approach: Quantitative analysis of tandem affinity-purified in vivo cross-linked protein complexes (QTAX) to decipher the 26 S proteasomeinteracting network
    • Guerrero, C, Tagwerker, C, Kaiser, P, and Huang, L (2006). "An integrated mass spectrometry-based proteomic approach: quantitative analysis of tandem affinity-purified in vivo cross-linked protein complexes (QTAX) to decipher the 26 S proteasomeinteracting network." Mol. Cell Proteomics 5, 366-378.
    • (2006) Mol. Cell Proteomics , vol.5 , pp. 366-378
    • Guerrero, C.1    Tagwerker, C.2    Kaiser, P.3    Huang, L.4
  • 11
    • 0033974688 scopus 로고    scopus 로고
    • Toward a protein-protein interaction map of the budding yeast: A comprehensive system to examine two-hybrid interactions in all possible combinations between the yeast proteins
    • Ito, T, Tashiro, K, Muta, S, Ozawa, R, Chiba, T, Nishizawa, M, Yamamoto, K, Kuhara, S, and Sakaki, Y (2000). "Toward a protein-protein interaction map of the budding yeast: a comprehensive system to examine two-hybrid interactions in all possible combinations between the yeast proteins." Proc. Natl. Acad. Sci. U.S.A. 97, 1143-1147.
    • (2000) Proc. Natl. Acad. Sci. U.S.A , vol.97 , pp. 1143-1147
    • Ito, T.1    Tashiro, K.2    Muta, S.3    Ozawa, R.4    Chiba, T.5    Nishizawa, M.6    Yamamoto, K.7    Kuhara, S.8    Sakaki, Y.9
  • 13
    • 0036583926 scopus 로고    scopus 로고
    • Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics
    • Ong, SE, Blagoev, B, Kratchmarova, I, Kristensen, DB, Steen, H, Pandey, A, and Mann, M (2002). "Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics." Mol. Cell Proteomics 1, 376-386.
    • (2002) Mol. Cell Proteomics , vol.1 , pp. 376-386
    • Ong, S.E.1    Blagoev, B.2    Kratchmarova, I.3    Kristensen, D.B.4    Steen, H.5    Pandey, A.6    Mann, M.7
  • 14
    • 24044520965 scopus 로고    scopus 로고
    • Isotopically coded cleavable cross-linker for studying protein-protein interaction and protein complexes
    • Petrotchenko, EV, Olkhovik, VK, and Borchers, CH (2005). "Isotopically coded cleavable cross-linker for studying protein-protein interaction and protein complexes." Mol. Cell Proteomics 4, 1167-1179.
    • (2005) Mol. Cell Proteomics , vol.4 , pp. 1167-1179
    • Petrotchenko, E.V.1    Olkhovik, V.K.2    Borchers, C.H.3
  • 15
    • 0033545844 scopus 로고    scopus 로고
    • Clonal selection and in vivo quantitation of protein interactions with protein-fragment complementation assays
    • Remy, I and Michnick, SW (1999). "Clonal selection and in vivo quantitation of protein interactions with protein-fragment complementation assays." Proc. Natl. Acad. Sci. U.S.A. 96, 5394-5399.
    • (1999) Proc. Natl. Acad. Sci. U.S.A , vol.96 , pp. 5394-5399
    • Remy, I.1    Michnick, S.W.2
  • 18
    • 33745742438 scopus 로고    scopus 로고
    • Chemical cross-linking and mass spectrometry to map three-dimensional protein structures and protein-protein interactions
    • Sinz, A (2006). "Chemical cross-linking and mass spectrometry to map three-dimensional protein structures and protein-protein interactions." Mass Spectrom. Rev. 25, 663-682.
    • (2006) Mass Spectrom. Rev , vol.25 , pp. 663-682
    • Sinz, A.1
  • 19
    • 36749104291 scopus 로고    scopus 로고
    • Quantification of dynamic protein complexes using Renilla luciferase fragment complementation applied to protein kinase A activities in vivo
    • Stefan, E, Aquin, S, Berger, N, Landry, CR, Nyfeler, B, Bouvier, M, and Michnick, SW (2007). "Quantification of dynamic protein complexes using Renilla luciferase fragment complementation applied to protein kinase A activities in vivo." Proc. Natl. Acad. Sci. U.S.A. 104, 16916-16921.
    • (2007) Proc. Natl. Acad. Sci. U.S.A , vol.104 , pp. 16916-16921
    • Stefan, E.1    Aquin, S.2    Berger, N.3    Landry, C.R.4    Nyfeler, B.5    Bouvier, M.6    Michnick, S.W.7
  • 20
    • 46849099222 scopus 로고    scopus 로고
    • Utility of formaldehyde cross-linking and mass spectrometry in the study of proteinprotein interactions
    • Sutherland, BW, Toews, J, and Kast, J (2008). "Utility of formaldehyde cross-linking and mass spectrometry in the study of proteinprotein interactions." J. Mass Spectrom. 43, 699-715.
    • (2008) J. Mass Spectrom , vol.43 , pp. 699-715
    • Sutherland, B.W.1    Toews, J.2    Kast, J.3
  • 21
    • 11844289583 scopus 로고    scopus 로고
    • Mass spectrometry identifiable cross-linking strategy for studying proteinprotein interactions
    • Tang, X, Munske, GR, Siems, WF, and Bruce, JE (2005). "Mass spectrometry identifiable cross-linking strategy for studying proteinprotein interactions." Anal. Chem. 77, 311-318.
    • (2005) Anal. Chem , vol.77 , pp. 311-318
    • Tang, X.1    Munske, G.R.2    Siems, W.F.3    Bruce, J.E.4
  • 23
    • 44149119998 scopus 로고    scopus 로고
    • Mass spectrometric identification of formaldehyde-induced peptide modifications under in vivo protein cross-linking conditions
    • Toews, J, Rogalski, JC, Clark, TJ, and Kast, J (2008). "Mass spectrometric identification of formaldehyde-induced peptide modifications under in vivo protein cross-linking conditions." Anal. Chim. Acta 618, 168-183.
    • (2008) Anal. Chim. Acta , vol.618 , pp. 168-183
    • Toews, J.1    Rogalski, J.C.2    Clark, T.J.3    Kast, J.4
  • 24
    • 22644437896 scopus 로고    scopus 로고
    • Identification and mapping of protein-protein interactions by a combination of cross-linking, cleavage, and proteomics
    • Trakselis, MA, Alley, SC, and Ishmael, FT (2005). "Identification and mapping of protein-protein interactions by a combination of cross-linking, cleavage, and proteomics." Bioconjugate Chem. 16, 741-750.
    • (2005) Bioconjugate Chem , vol.16 , pp. 741-750
    • Trakselis, M.A.1    Alley, S.C.2    Ishmael, F.T.3
  • 26
    • 10644254712 scopus 로고    scopus 로고
    • Identification of protein-protein interactions using in vivo cross-linking and mass spectrometry
    • Vasilescu, J, Guo, X, and Kast, J (2004). "Identification of protein-protein interactions using in vivo cross-linking and mass spectrometry." Proteomics 4, 3845-3854.
    • (2004) Proteomics , vol.4 , pp. 3845-3854
    • Vasilescu, J.1    Guo, X.2    Kast, J.3
  • 27
    • 39049117451 scopus 로고    scopus 로고
    • Identifying dynamic interactors of protein complexes by quantitative mass spectrometry
    • Wang, X and Huang, L (2008). "Identifying dynamic interactors of protein complexes by quantitative mass spectrometry." Mol. Cell Proteomics 7, 46-57.
    • (2008) Mol. Cell Proteomics , vol.7 , pp. 46-57
    • Wang, X.1    Huang, L.2
  • 28
    • 26844576371 scopus 로고    scopus 로고
    • Time-resolved mass spectrometry of tyrosine phosphorylation sites in the epidermal growth factor receptor signaling network reveals dynamic modules
    • Zhang, Y, Wolf-Yadlin, A, Ross, PL, Pappin, DJ, Rush, J, Lauffenburger, DA, and White, FM (2005). "Time-resolved mass spectrometry of tyrosine phosphorylation sites in the epidermal growth factor receptor signaling network reveals dynamic modules." Mol. Cell Proteomics 4, 1240-1250.
    • (2005) Mol. Cell Proteomics , vol.4 , pp. 1240-1250
    • Zhang, Y.1    Wolf-Yadlin, A.2    Ross, P.L.3    Pappin, D.J.4    Rush, J.5    Lauffenburger, D.A.6    White, F.M.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.