Proteomics analysis of plasma membrane from liver sinusoidal endothelial cells after partial hepatectomy by an improved two-dimensional electrophoresis

Molecular and Cellular Biochemistry

Volumn 344, Issue 1-2, 2010, Pages 137-150

  Li, Xuanwen ^a   Xiong, Li ^b   Xie, Chunliang ^a   Cao, Jia ^a   Deng, Huobao ^a   Lin, Yong ^a   Cao, Rui ^a   Li, Jianglin ^a   Chen, Ping ^a   Liang, Songping ^a  

^a HUNAN NORMAL UNIVERSITY   (China)

^b CENTRAL SOUTH UNIVERSITY   (China)

Author keywords

16 BAC PAGE; Angiogenesis; Partial hepatectomy; Plasma membrane; Proteomics

Indexed keywords

BETA3 INTEGRIN; COLLAGEN TYPE 4; INDUCIBLE NITRIC OXIDE SYNTHASE; MEMBRANE PROTEIN;

ANIMAL CELL; ANIMAL EXPERIMENT; ANIMAL TISSUE; ARTICLE; CELL MEMBRANE; CONTROLLED STUDY; ENDOTHELIUM CELL; IN VIVO STUDY; LIVER REGENERATION; LIVER SINUSOID; MALE; NONHUMAN; PARTIAL HEPATECTOMY; POLYACRYLAMIDE GEL ELECTROPHORESIS; PROTEIN EXPRESSION; PROTEOMICS; RAT; TWO DIMENSIONAL ELECTROPHORESIS;

ANIMALS; BLOTTING, WESTERN; CELL MEMBRANE; CHROMATOGRAPHY, AFFINITY; ELECTROPHORESIS, GEL, TWO-DIMENSIONAL; HEPATECTOMY; LIVER; MICROSCOPY, ELECTRON, TRANSMISSION; PROTEOMICS; RATS;

EID: 78449302354     PISSN: 03008177     EISSN: 15734919     Source Type: Journal    
DOI: 10.1007/s11010-010-0537-z     Document Type: Article

References (41)

1. J Folkman 1995 Angiogenesis in cancer, vascular, rheumatoid and other disease Nat Med 1 27 31 1:CAS:528:DyaK2MXjs1KnsLk%3D 10.1038/nm0195-27 7584949
2. TA Drixler MJ Vogten ED Ritchie TJ van Vroonhoven MF Gebbink EE Voest IH Borel Rinkes 2002 Liver regeneration is an angiogenesis-associated phenomenon Ann Surg 236 703 711 10.1097/00000658-200212000-00002 12454508 (discussion 711-712)
3. GK Michalopoulos MC DeFrances 1997 Liver regeneration Science 276 60 66 1:CAS:528:DyaK2sXitlyqt78%3D 10.1126/science.276.5309.60 9082986
4. A Martinez-Hernandez PS Amenta 1995 The extracellular matrix in hepatic regeneration FASEB J 9 1401 1410 1:CAS:528:DyaK2MXpsFOgtbc%3D 7589981
5. MA Ross CM Sander TB Kleeb SC Watkins DB Stolz 2001 Spatiotemporal expression of angiogenesis growth factor receptors during the revascularization of regenerating rat liver Hepatology 34 1135 1148 1:CAS:528: DC%2BD38XhslWisg%3D%3D 10.1053/jhep.2001.29624 11732003
6. DB Stolz MA Ross HM Salem WM Mars GK Michalopoulos K Enomoto 1999 Cationic colloidal silica membrane perturbation as a means of examining changes at the sinusoidal surface during liver regeneration Am J Pathol 155 1487 1498 1:STN:280:DC%2BD3c%2FhvFKnsQ%3D%3D 10550305
7. S Seaman J Stevens MY Yang D Logsdon C Graff-Cherry B St Croix 2007 Genes that distinguish physiological and pathological angiogenesis Cancer Cell 11 539 554 1:CAS:528:DC%2BD2sXmvVaksrk%3D 10.1016/j.ccr.2007.04.017 17560335
8. V Mittal DJ Nolan 2007 Genomics and proteomics approaches in understanding tumor angiogenesis Expert Rev Mol Diagn 7 133 147 1:CAS:528:DC%2BD2sXitlantbo%3D 10.1586/14737159.7.2.133 17331062
9. CW Strey MS Winters MM Markiewski JD Lambris 2005 Partial hepatectomy induced liver proteome changes in mice Proteomics 5 318 325 1:CAS:528: DC%2BD2MXhtleisLc%3D 10.1002/pmic.200400913 15602770
10. Y Sun X Deng W Li Y Yan H Wei Y Jiang F He 2007 Liver proteome analysis of adaptive response in rat immediately after partial hepatectomy Proteomics 7 4398 4407 1:CAS:528:DC%2BD2sXhsVOqsL%2FE 10.1002/pmic.200600913 17979177
11. LA McCann MC Haywood BH Ren AM Simpson M Guilhaus VC Wasinger MJ Raftery RA Davey 2007 Identification of vascular surface proteins by in vivo biotinylation: a method sufficiently sensitive to detect changes in rat liver 2 weeks after partial hepatectomy J Proteome Res 6 3108 3113 1:CAS:528: DC%2BD2sXntVyju7o%3D 10.1021/pr070032m 17602683
12. C Roesli V Mumprecht D Neri M Detmar 2008 Identification of the surface-accessible, lineage-specific vascular proteome by two-dimensional peptide mapping FASEB J 22 1933 1944 1:CAS:528:DC%2BD1cXntlyjtLs%3D 10.1096/fj.07-100529 18180333
13. HC Hsieh YT Chen JM Li TY Chou MF Chang SC Huang TL Tseng CC Liu SF Chen 2009 Protein profilings in mouse liver regeneration after partial hepatectomy using iTRAQ technology J Proteome Res 8 1004 1013 1:CAS:528:DC%2BD1cXhsFais7%2FN 10.1021/pr800696m 19099420
14. MA Fernandez C Albor M Ingelmo-Torres SJ Nixon C Ferguson T Kurzchalia F Tebar C Enrich RG Parton A Pol 2006 Caveolin-1 is essential for liver regeneration Science 313 1628 1632 1:CAS:528:DC%2BD28XpsVOkt7o%3D 10.1126/science.1130773 16973879
15. JN Rybak A Ettorre B Kaissling R Giavazzi D Neri G Elia 2005 In vivo protein biotinylation for identification of organ-specific antigens accessible from the vasculature Nat Methods 2 291 298 1:CAS:528:DC%2BD2MXisFKhtb0%3D 10.1038/nmeth745 15782212
16. AB Simonson JE Schnitzer 2007 Vascular proteomic mapping in vivo J Thromb Haemost 5 Suppl 1 183 187 10.1111/j.1538-7836.2007.02551.x 17635725
17. X Li Q Jin J Cao C Xie R Cao Z Liu J Xiong J Li X Yang P Chen S Liang 2009 Evaluation of two cell surface modification methods for proteomic analysis of plasma membrane from isolated mouse hepatocytes Biochim Biophys Acta 1794 32 41 1:CAS:528:DC%2BD1cXhsVCmsLbP 18707032
18. BS Jacobson DB Stolz JE Schnitzer 1996 Identification of endothelial cell-surface proteins as targets for diagnosis and treatment of disease Nat Med 2 482 484 1:CAS:528:DyaK28XitVKmt7g%3D 10.1038/nm0496-482 8597963
19. P Oh Y Li J Yu E Durr KM Krasinska LA Carver JE Testa JE Schnitzer 2004 Subtractive proteomic mapping of the endothelial surface in lung and solid tumours for tissue-specific therapy Nature 429 629 635 1:CAS:528: DC%2BD2cXks1Kls7c%3D 10.1038/nature02580 15190345
20. X Li C Xie J Cao Q He R Cao Y Lin Q Jin P Chen X Wang S Liang 2009 An in vivo membrane density perturbation strategy for identification of liver sinusoidal surface proteome accessible from the vasculature J Proteome Res 8 123 132 1:CAS:528:DC%2BD1cXhtl2nsrbO 10.1021/pr8006683 19053532
21. SE Ong M Mann 2005 Mass spectrometry-based proteomics turns quantitative Nat Chem Biol 1 252 262 1:CAS:528:DC%2BD2MXhtVamtrfI 10.1038/nchembio736 16408053
22. CC Wu JR Yates 3rd 2003 The application of mass spectrometry to membrane proteomics Nat Biotechnol 21 262 267 1:CAS:528:DC%2BD3sXhsFajsrs%3D 10.1038/nbt0303-262 12610573
23. X Lu H Zhu 2005 Tube-gel digestion: a novel proteomic approach for high throughput analysis of membrane proteins Mol Cell Proteomics 4 1948 1958 1:CAS:528:DC%2BD2MXhtlWqsb%2FM 10.1074/mcp.M500138-MCP200 16150870
24. R Cao Q He J Zhou Q He Z Liu X Wang P Chen J Xie S Liang 2008 High-throughput analysis of rat liver plasma membrane proteome by a nonelectrophoretic in-gel tryptic digestion coupled with mass spectrometry identification J Proteome Res 7 535 545 1:CAS:528:DC%2BD1cXitlWgug%3D%3D 10.1021/pr070411f 18166008
25. RJ Braun N Kinkl M Beer M Ueffing 2007 Two-dimensional electrophoresis of membrane proteins Anal Bioanal Chem 389 1033 1045 1:CAS:528:DC%2BD2sXhtVynur7P 10.1007/s00216-007-1514-6 17680235
26. GM Higgins RM Anderson 1931 Experimental pathology of the liver I. Restoration of the liver of the white rat following partial surgical removal Arch Pathol 12 186 202
27. X Li J Cao Q Jin C Xie Q He R Cao J Xiong P Chen X Wang S Liang 2008 A proteomic study reveals the diversified distribution of plasma membrane-associated proteins in rat hepatocytes J Cell Biochem 104 965 984 1:CAS:528:DC%2BD1cXntlWgs74%3D 10.1002/jcb.21680 18247341
28. P Chen X Li Y Sun Z Liu R Cao Q He M Wang J Xiong J Xie X Wang S Liang 2006 Proteomic analysis of rat hippocampal plasma membrane: characterization of potential neuronal-specific plasma membrane proteins J Neurochem 98 1126 1140 1:CAS:528:DC%2BD28XhtFemu7nP 10.1111/j.1471-4159.2006.03934.x 16895580
29. Q Yuan J An DG Liu L Sun YZ Ge YL Huang GJ Xu FK Zhao 2004 Proteomic analysis of differential protein expression in a human hepatoma revertant cell line by using an improved two-dimensional electrophoresis procedure combined with matrix assisted laser desorption/ionization-time of flight-mass spectrometry Electrophoresis 25 1160 1168 1:CAS:528:DC%2BD2cXjvVartL0%3D 10.1002/elps.200305769 15095460
30. YY Wang PY Cheung MS Wong SC Lo 2003 "Two-in-one" gel for spot matching after two-dimensional electrophoresis Proteomics 3 580 583 1:CAS:528:DC%2BD3sXjvFGis7Y%3D 10.1002/pmic.200300423 12748938
31. J Li H Steen SP Gygi 2003 Protein profiling with cleavable isotope-coded affinity tag (cICAT) reagents: the yeast salinity stress response Mol Cell Proteomics 2 1198 1204 1:CAS:528:DC%2BD3sXpsFGgu7o%3D 10.1074/mcp.M300070-MCP200 14506205
32. D Josic JG Clifton 2007 Mammalian plasma membrane proteomics Proteomics 7 3010 3029 1:CAS:528:DC%2BD2sXhtVelsL7E 10.1002/pmic.200700139 17654460
33. AE Speers CC Wu 2007 Proteomics of integral membrane proteins-theory and application Chem Rev 107 3687 3714 1:CAS:528:DC%2BD2sXos1egs7o%3D 10.1021/cr068286z 17683161
34. J Burre T Beckhaus C Corvey M Karas H Zimmermann W Volknandt 2006 Synaptic vesicle proteins under conditions of rest and activation: analysis by 2-D difference gel electrophoresis Electrophoresis 27 3488 3496 1:CAS:528:DC%2BD28XhtVWgtrjM 10.1002/elps.200500864 16944461
35. B Bisle A Schmidt B Scheibe C Klein A Tebbe J Kellermann F Siedler F Pfeiffer F Lottspeich D Oesterhelt 2006 Quantitative profiling of the membrane proteome in a halophilic archaeon Mol Cell Proteomics 5 1543 1558 1:CAS:528:DC%2BD28XpvVGgur0%3D 10.1074/mcp.M600106-MCP200 16804162
36. VL Thijssen S Hulsmans AW Griffioen 2008 The galectin profile of the endothelium: altered expression and localization in activated and tumor endothelial cells Am J Pathol 172 545 553 1:CAS:528:DC%2BD1cXis1aisL0%3D 10.2353/ajpath.2008.070938 18202194
37. S Ambs WG Merriam WP Bennett E Felley-Bosco MO Ogunfusika SM Oser S Klein PG Shields TR Billiar CC Harris 1998 Frequent nitric oxide synthase-2 expression in human colon adenomas: implication for tumor angiogenesis and colon cancer progression Cancer Res 58 334 341 1:CAS:528:DyaK1cXnt1ajtA%3D%3D 9443414
38. CN Chen FJ Hsieh YM Cheng KJ Chang PH Lee 2006 Expression of inducible nitric oxide synthase and cyclooxygenase-2 in angiogenesis and clinical outcome of human gastric cancer J Surg Oncol 94 226 233 1:CAS:528:DC%2BD28XpvFejurc%3D 10.1002/jso.20372 16900533
39. SA Mousa 2008 Cell adhesion molecules: potential therapeutic and diagnostic implications Mol Biotechnol 38 33 40 1:CAS:528:DC%2BD1cXmtFGisw%3D%3D 10.1007/s12033-007-0072-7 18095189
40. J Medina AG Arroyo F Sanchez-Madrid R Moreno-Otero 2004 Angiogenesis in chronic inflammatory liver disease Hepatology 39 1185 1195 1:CAS:528: DC%2BD2cXks1Sjtrw%3D 10.1002/hep.20193 15122744
41. S Li NF Huang S Hsu 2005 Mechanotransduction in endothelial cell migration J Cell Biochem 96 1110 1126 1:CAS:528:DC%2BD2MXht1KgtbbI 10.1002/jcb.20614 16167340