-
1
-
-
84984932472
-
Exploring the new world of the genome with DNA microarrays
-
P. A. Brown and D. Botstein, "Exploring the New World of the Genome with DNA Microarrays", Nature Genetics, vol. 21, pp. 33-37, 1999.
-
(1999)
Nature Genetics
, vol.21
, pp. 33-37
-
-
Brown, P.A.1
Botstein, D.2
-
3
-
-
2042437650
-
Initial sequencing and analysis of the human genome
-
Feb
-
J. Szustakowski, "Initial Sequencing and Analysis of the Human Genome", Nature, vol. 409, pp. 860-921, Feb. 2001.
-
(2001)
Nature
, vol.409
, pp. 860-921
-
-
Szustakowski, J.1
-
4
-
-
0003846041
-
A tutorial on learning with bayesian networks
-
Microsoft Corporation, Nov
-
D. Heckerman, "A Tutorial on Learning with Bayesian Networks", technical report, Microsoft Research, Microsoft Corporation, Nov. 1996.
-
(1996)
Technical Report, Microsoft Research
-
-
Heckerman, D.1
-
5
-
-
17644412264
-
Bayesian network analysis of signaling networks: A primer
-
Apr
-
D. Péer, "Bayesian Network Analysis of Signaling Networks: A Primer", Sciencés Signal Transduction Knowledge Environment, vol. 2005, no. 281, p. l4, Apr. 2005.
-
(2005)
Sciencés Signal Transduction Knowledge Environment
, vol.2005
, Issue.281
-
-
Péer, D.1
-
6
-
-
0000854197
-
Learning the structure of dynamic probabilistic networks
-
N. Friedman, K. Murphy, and S. Russell, "Learning the Structure of Dynamic Probabilistic Networks", Proc. Uncertainty in Artificial Intelligence Conf., pp. 139-147, 1998.
-
(1998)
Proc. Uncertainty in Artificial Intelligence Conf.
, pp. 139-147
-
-
Friedman, N.1
Murphy, K.2
Russell, S.3
-
7
-
-
0033707946
-
Using Bayesian networks to analyze expression data
-
N. Friedman, M. Linial, I. Nachman, and D. Péer, "Using Bayesian Networks to Analyze Expression Data", J. Computational Biology, vol. 7, nos. 3/4, pp. 601-620, 2000.
-
(2000)
J. Computational Biology
, vol.7
, Issue.3-4
, pp. 601-620
-
-
Friedman, N.1
Linial, M.2
Nachman, I.3
Péer, D.4
-
8
-
-
17644427718
-
Causal protein-signaling networks derived from multiparameter single-cell data
-
Apr
-
K. Sachs, O. Perez, D. Péer, D. Lauffenburger, and G. Nolan, "Causal Protein-Signaling Networks Derived from Multiparameter Single-Cell Data", Science, vol. 308, pp. 523-529, Apr. 2005.
-
(2005)
Science
, vol.308
, pp. 523-529
-
-
Sachs, K.1
Perez, O.2
Péer, D.3
Lauffenburger, D.4
Nolan, G.5
-
10
-
-
0344844807
-
Modelling regulatory pathways in E. coli from time series expression profiles
-
I. M. Ong, J. D. Glasner, and D. Page, "Modelling Regulatory Pathways in E. coli from Time Series Expression Profiles", Bioinformatics, vol. 18, pp. s241-s248, 2002.
-
(2002)
Bioinformatics
, vol.18
-
-
Ong, I.M.1
Glasner, J.D.2
Page, D.3
-
11
-
-
14844307159
-
Inferring quantitative models of regulatory networks from expression data
-
Aug
-
I. Nachman, A. Regev, and N. Friedman, "Inferring Quantitative Models of Regulatory Networks from Expression Data", Bioinformatics, vol. 20, suppl. 1, pp. i248-i256, Aug. 2004.
-
(2004)
Bioinformatics
, vol.20
, Issue.1 SUPPL.
-
-
Nachman, I.1
Regev, A.2
Friedman, N.3
-
12
-
-
0344464762
-
Sensitivity and specificity of inferring genetic regulatory interactions from microarray experiments with dynamic bayesian networks
-
Nov
-
D. Husmeier, "Sensitivity and Specificity of Inferring Genetic Regulatory Interactions from Microarray Experiments with Dynamic Bayesian Networks", Bioinformatics, vol. 19, no. 17, pp. 2271-2282, Nov. 2003.
-
(2003)
Bioinformatics
, vol.19
, Issue.17
, pp. 2271-2282
-
-
Husmeier, D.1
-
13
-
-
13844253637
-
Bayesian approach to reconstructing genetic regulatory networks with hidden factors
-
Feb
-
M. J. Beal, F. Falciani, Z. Ghahramani, C. Rangel, and D. L. Wild, "Bayesian Approach to Reconstructing Genetic Regulatory Networks with Hidden Factors", Bioinformatics, vol. 21, no. 3, pp. 349-356, Feb. 2005.
-
(2005)
Bioinformatics
, vol.21
, Issue.3
, pp. 349-356
-
-
Beal, M.J.1
Falciani, F.2
Ghahramani, Z.3
Rangel, C.4
Wild, D.L.5
-
14
-
-
15944361900
-
Informative structure priors: Joint learning of dynamic regulatory networks from multiple types of data
-
A. Bernard and A. J. Hartemink, "Informative Structure Priors: Joint Learning of Dynamic Regulatory Networks from Multiple Types of Data", Proc. Pacific Symp. Biocomputing, pp. 459-470, 2005.
-
(2005)
Proc. Pacific Symp. Biocomputing
, pp. 459-470
-
-
Bernard, A.1
Hartemink, A.J.2
-
15
-
-
12344259602
-
Advances to Bayesian network inference for generating causal networks from observational biological data
-
Dec
-
J. Yu, V. A. Smith, P. P. Wang, A. J. Hartemink, and E. D. Jarvis, "Advances to Bayesian Network Inference for Generating Causal Networks from Observational Biological Data", Bioinformatics, vol. 20, pp. 3594-3603, Dec. 2004.
-
(2004)
Bioinformatics
, vol.20
, pp. 3594-3603
-
-
Yu, J.1
Smith, V.A.2
Wang, P.P.3
Hartemink, A.J.4
Jarvis, E.D.5
-
16
-
-
0004194541
-
-
Cell Press & Blackwell Scientific Publishing
-
M. Ptashne, A Genetic Switch. Cell Press & Blackwell Scientific Publishing, 1992.
-
(1992)
A Genetic Switch
-
-
Ptashne, M.1
-
18
-
-
0034659898
-
Genomics, gene expression and DNA arrays
-
June
-
D. J. Lockhart and E. A. Winzeler, "Genomics, Gene Expression and DNA Arrays", Nature, vol. 405, pp. 827-836, June 2000.
-
(2000)
Nature
, vol.405
, pp. 827-836
-
-
Lockhart, D.J.1
Winzeler, E.A.2
-
19
-
-
84984933234
-
High density synthetic oligonucleotide arrays
-
R. J. Lipschutz, S. P. A. Fodor, T. R. Gingeras, and D. J. Lockhart, "High Density Synthetic Oligonucleotide Arrays", Nature Genetics, vol. 21, pp. 20-24, 1999.
-
(1999)
Nature Genetics
, vol.21
, pp. 20-24
-
-
Lipschutz, R.J.1
Fodor, S.P.A.2
Gingeras, T.R.3
Lockhart, D.J.4
-
21
-
-
78449313350
-
-
"ibioSim, "
-
"ibioSim", http://www.async.ece.utah.edu/iBioSim/, 2010.
-
(2010)
-
-
-
22
-
-
33645429016
-
Exact stochastic simulation of coupled chemical reactions
-
D. T. Gillespie, "Exact Stochastic Simulation of Coupled Chemical Reactions", J. Physical Chemistry, vol. 81, no. 25, pp. 2340-2361, 1977.
-
(1977)
J. Physical Chemistry
, vol.81
, Issue.25
, pp. 2340-2361
-
-
Gillespie, D.T.1
-
23
-
-
0037165942
-
Combinatorial synthesis of genetic networks
-
C. C. Guet, M. B. Elowitz, W. Hsing, and S. Leibler, "Combinatorial Synthesis of Genetic Networks", Science, vol. 296, pp. 1466-1470, 2002.
-
(2002)
Science
, vol.296
, pp. 1466-1470
-
-
Guet, C.C.1
Elowitz, M.B.2
Hsing, W.3
Leibler, S.4
-
24
-
-
0031742022
-
Comprehensive identification of cell cycle-regulated genes of the yeast saccharomyce cerevisiae by microarray hybridization
-
Dec
-
P. T. Spellman, G. Sherlock, M. Q. Zhang, V. R. Iyer, K. Anders, M. B. Eisen, P. O. Brown, D. Botstein, and B. Futcher, "Comprehensive Identification of Cell Cycle-Regulated Genes of the Yeast Saccharomyce Cerevisiae by Microarray Hybridization", Molecular Biology of the Cell, vol. 9, pp. 3272-3297, Dec. 1998.
-
(1998)
Molecular Biology of the Cell.
, vol.9
, pp. 3272-3297
-
-
Spellman, P.T.1
Sherlock, G.2
Zhang, M.Q.3
Iyer, V.R.4
Anders, K.5
Eisen, M.B.6
Brown, P.O.7
Botstein, D.8
Futcher, B.9
-
25
-
-
0037174671
-
Transcriptional regulatory networks in saccharomyces cerevisiae
-
Oct
-
T. I. Lee, N. J. Rinaldi, F. Robert, D. T. Odom, Z. Bar-Joseph, G. K. Gerber, N. M. Hannett, C. T. Harbison, C. M. Thompson, I. Simon, J. Zeitlinger, E. G. Jennings, H. L. Murray, D. B. Gordon, B. Ren, J. J. Wyrick, J. B. Tagne, T. L. Volkert, E. Fraenkel, D. K. Gifford, and R. A. Young, " Transcriptional Regulatory Networks in Saccharomyces Cerevisiae", Science, vol. 298, no. 5594, pp. 799-804, Oct. 2002.
-
(2002)
Science
, vol.298
, Issue.5594
, pp. 799-804
-
-
Lee, T.I.1
Rinaldi, N.J.2
Robert, F.3
Odom, D.T.4
Bar-Joseph, Z.5
Gerber, G.K.6
Hannett, N.M.7
Harbison, C.T.8
Thompson, C.M.9
Simon, I.10
Zeitlinger, J.11
Jennings, E.G.12
Murray, H.L.13
Gordon, D.B.14
Ren, B.15
Wyrick, J.J.16
Tagne, J.B.17
Volkert, T.L.18
Fraenkel, E.19
Gifford, D.K.20
Young, R.A.21
more..
|