메뉴 건너뛰기




Volumn 5, Issue 7, 2010, Pages 601-611

An S/MAR-based l1 retrotransposition cassette mediates sustained levels of insertional mutagenesis without suffering from epigenetic silencing of DNA methylation

Author keywords

DNA methylation; EBNA1; Episome; Minicircle; Nonviral; Retrotransposition; S MAR; Somatic mutagenesis; Vector

Indexed keywords

ENHANCED GREEN FLUORESCENT PROTEIN; EPSTEIN BARR VIRUS ANTIGEN 1; MINICIRCLE DNA;

EID: 78449244882     PISSN: 15592294     EISSN: 15592308     Source Type: Journal    
DOI: 10.4161/epi.5.7.12647     Document Type: Article
Times cited : (7)

References (45)
  • 1
    • 33746263173 scopus 로고    scopus 로고
    • Transposon technology and vertebrate functional genomics
    • An W, Boeke JD. Transposon technology and vertebrate functional genomics. Genome Biol 2005; 6:361
    • (2005) Genome Biol , vol.6 , pp. 361
    • An, W.1    Boeke, J.D.2
  • 3
    • 38449109095 scopus 로고    scopus 로고
    • Mutagenesis in rodents using the L1 retrotransposon
    • Ostertag EM, Madison BB, Kano H. Mutagenesis in rodents using the L1 retrotransposon. Genome Biol 2007; 8:16.
    • (2007) Genome Biol , vol.8 , pp. 16
    • Ostertag, E.M.1    Madison, B.B.2    Kano, H.3
  • 5
    • 38449111554 scopus 로고    scopus 로고
    • Transposons for cancer gene discovery: Sleeping Beauty and beyond
    • Collier LS, Largaespada DA. Transposons for cancer gene discovery: Sleeping Beauty and beyond. Genome Biol 2007; 8:15.
    • (2007) Genome Biol , vol.8 , pp. 15
    • Collier, L.S.1    Largaespada, D.A.2
  • 7
    • 2442667886 scopus 로고    scopus 로고
    • Transcriptional disruption by the L1 retrotransposon and implications for mammalian transcriptomes
    • Han JS, Szak ST, Boeke JD. Transcriptional disruption by the L1 retrotransposon and implications for mammalian transcriptomes. Nature 2004; 429:268-74.
    • (2004) Nature , vol.429 , pp. 268-274
    • Han, J.S.1    Szak, S.T.2    Boeke, J.D.3
  • 8
    • 0345604433 scopus 로고    scopus 로고
    • An important role for RUNX3 in human L1 transcription and retrotransposition
    • Yang N, Zhang L, Zhang Y, Kazazian HH, Jr. An important role for RUNX3 in human L1 transcription and retrotransposition. Nucl Acids Res 2003; 31: 4929-40.
    • (2003) Nucl Acids Res , vol.31 , pp. 4929-4940
    • Yang, N.1    Zhang, L.2    Zhang, Y.3    Kazazian Jr., H.H.4
  • 9
    • 2442671716 scopus 로고    scopus 로고
    • A highly active synthetic mammalian retrotransposon
    • Han JS, Boeke JD. A highly active synthetic mammalian retrotransposon. Nature 2004; 429:314-8.
    • (2004) Nature , vol.429 , pp. 314-318
    • Han, J.S.1    Boeke, J.D.2
  • 11
  • 13
    • 20544466648 scopus 로고    scopus 로고
    • Somatic mosaicism in neuronal precursor cells mediated by L1 retrotransposition
    • Muotri AR, Chu VT, Marchetto MC, Deng W, Moran JV, Gage FH. Somatic mosaicism in neuronal precursor cells mediated by L1 retrotransposition. Nature 2005; 435:903-10.
    • (2005) Nature , vol.435 , pp. 903-910
    • Muotri, A.R.1    Chu, V.T.2    Marchetto, M.C.3    Deng, W.4    Moran, J.V.5    Gage, F.H.6
  • 14
    • 66149168927 scopus 로고    scopus 로고
    • L1 retrotransposition occurs mainly in embryogenesis and creates somatic mosaicism
    • Kano H, Godoy I, Courtney C, Vetter MR, Gerton GL, Ostertag EM, et al. L1 retrotransposition occurs mainly in embryogenesis and creates somatic mosaicism. Genes Dev 2009; 23:1303-12.
    • (2009) Genes Dev , vol.23 , pp. 1303-1312
    • Kano, H.1    Godoy, I.2    Courtney, C.3    Vetter, M.R.4    Gerton, G.L.5    Ostertag, E.M.6
  • 16
    • 33646814901 scopus 로고    scopus 로고
    • Human LINE-1 retrotransposon induces DNA damage and apoptosis in cancer cells
    • Belgnaoui SM, Gosden RG, Semmes OJ, Haoudi A. Human LINE-1 retrotransposon induces DNA damage and apoptosis in cancer cells. Cancer Cell Int 2006; 6:13.
    • (2006) Cancer Cell Int , vol.6 , pp. 13
    • Belgnaoui, S.M.1    Gosden, R.G.2    Semmes, O.J.3    Haoudi, A.4
  • 17
    • 46149113196 scopus 로고    scopus 로고
    • L1 mobile element expression causes multiple types of toxicity
    • Wallace NA, Belancio VP, Deininger PL. L1 mobile element expression causes multiple types of toxicity. Gene 2008; 419:75-81.
    • (2008) Gene , vol.419 , pp. 75-81
    • Wallace, N.A.1    Belancio, V.P.2    Deininger, P.L.3
  • 18
    • 34548348766 scopus 로고    scopus 로고
    • Genome-wide prediction of matrix attachment regions that increase gene expression in mammalian cells
    • Girod PA, Nguyen DQ, Calabrese D, Puttini S, Grandjean M, Martinet D, et al. Genome-wide prediction of matrix attachment regions that increase gene expression in mammalian cells. Nat Methods 2007; 4:747-53.
    • (2007) Nat Methods , vol.4 , pp. 747-753
    • Girod, P.A.1    Nguyen, D.Q.2    Calabrese, D.3    Puttini, S.4    Grandjean, M.5    Martinet, D.6
  • 20
    • 59249084751 scopus 로고    scopus 로고
    • Sustained transgene expression using MAR elements
    • Harraghy N, Gaussin A, Mermod N. Sustained transgene expression using MAR elements. Curr Gene Ther 2008; 8:353-66.
    • (2008) Curr Gene Ther , vol.8 , pp. 353-366
    • Harraghy, N.1    Gaussin, A.2    Mermod, N.3
  • 21
    • 57049172006 scopus 로고    scopus 로고
    • Persistent episomal transgene expression in liver following delivery of a scaffold/ matrix attachment region containing non-viral vector
    • Argyros O, Wong SP, Niceta M, Waddington SN, Howe SJ, Coutelle C, et al. Persistent episomal transgene expression in liver following delivery of a scaffold/ matrix attachment region containing non-viral vector. Gene Ther 2008; 15:1593-605.
    • (2008) Gene Ther , vol.15 , pp. 1593-1605
    • Argyros, O.1    Wong, S.P.2    Niceta, M.3    Waddington, S.N.4    Howe, S.J.5    Coutelle, C.6
  • 24
    • 33746368052 scopus 로고    scopus 로고
    • SV40 large T antigen upregulates the retrotransposition frequency of viral-like 30 elements
    • Noutsopoulos D, Vartholomatos G, Kolaitis N, Tzavaras T. SV40 large T antigen upregulates the retrotransposition frequency of viral-like 30 elements. J Mol Biol 2006; 361:450-61.
    • (2006) J Mol Biol , vol.361 , pp. 450-461
    • Noutsopoulos, D.1    Vartholomatos, G.2    Kolaitis, N.3    Tzavaras, T.4
  • 25
    • 3843139313 scopus 로고    scopus 로고
    • Nuclear scaffold/matrix attached region modules linked to a transcription unit are sufficient for replication and maintenance of a mammalian episome
    • Jenke AC, Stehle IM, Herrmann F, Eisenberger T, Baiker A, Bode J, et al. Nuclear scaffold/matrix attached region modules linked to a transcription unit are sufficient for replication and maintenance of a mammalian episome. Proc Nat Acad Sci USA 2004; 101:11322-7.
    • (2004) Proc Nat Acad Sci USA , vol.101 , pp. 11322-11327
    • Jenke, A.C.1    Stehle, I.M.2    Herrmann, F.3    Eisenberger, T.4    Baiker, A.5    Bode, J.6
  • 26
    • 0030473770 scopus 로고    scopus 로고
    • Engineering a miniherpesvirus as a general strategy to transduce up to 180 kb of functional self-replicating human minichromosomes
    • Sun TQ, Livanos E, Vos JM. Engineering a miniherpesvirus as a general strategy to transduce up to 180 kb of functional self-replicating human minichromosomes. Gene Ther 1996; 3:1081-8.
    • (1996) Gene Ther , vol.3 , pp. 1081-1088
    • Sun, T.Q.1    Livanos, E.2    Vos, J.M.3
  • 27
    • 0033780721 scopus 로고    scopus 로고
    • Mitotic stability of an episomal vector containing a human scaffold/matrix-attached region is provided by association with nuclear matrix
    • Baiker A, Maercker C, Piechaczek C, Schmidt SB, Bode J, Benham C, et al. Mitotic stability of an episomal vector containing a human scaffold/matrix-attached region is provided by association with nuclear matrix. Nat Cell Biol 2000; 2:182-4.
    • (2000) Nat Cell Biol , vol.2 , pp. 182-184
    • Baiker, A.1    Maercker, C.2    Piechaczek, C.3    Schmidt, S.B.4    Bode, J.5    Benham, C.6
  • 28
    • 34948866264 scopus 로고    scopus 로고
    • The coupling of synthesis and partitioning of EBV's plasmid replicon is revealed in live cells
    • Nanbo A, Sugden A, Sugden B. The coupling of synthesis and partitioning of EBV's plasmid replicon is revealed in live cells. EMBO J 2007; 26:4252-62.
    • (2007) EMBO J , vol.26 , pp. 4252-4262
    • Nanbo, A.1    Sugden, A.2    Sugden, B.3
  • 29
    • 0034162764 scopus 로고    scopus 로고
    • Expression of the human CFTR gene from episomal oriP-EBNA1-YACs in mouse cells
    • Huertas D, Howe S, McGuigan A, Huxley C. Expression of the human CFTR gene from episomal oriP-EBNA1-YACs in mouse cells. Hum Mol Genet 2000; 9:617-29.
    • (2000) Hum Mol Genet , vol.9 , pp. 617-629
    • Huertas, D.1    Howe, S.2    McGuigan, A.3    Huxley, C.4
  • 30
    • 0030940594 scopus 로고    scopus 로고
    • Identification of critical CpG sites for repression of L1 transcription by DNA methylation
    • Hata K, Sakaki Y. Identification of critical CpG sites for repression of L1 transcription by DNA methylation. Gene 1997; 189:227-34.
    • (1997) Gene , vol.189 , pp. 227-234
    • Hata, K.1    Sakaki, Y.2
  • 31
    • 17644398266 scopus 로고    scopus 로고
    • Hemimethylation and non-CpG methylation levels in a promoter region of human LINE-1 (L1) repeated elements
    • Burden AF, Manley NC, Clark AD, Gartler SM, Laird CD, Hansen RS. Hemimethylation and non-CpG methylation levels in a promoter region of human LINE-1 (L1) repeated elements. J Biol Chem 2005; 280:14413-9.
    • (2005) J Biol Chem , vol.280 , pp. 14413-14419
    • Burden, A.F.1    Manley, N.C.2    Clark, A.D.3    Gartler, S.M.4    Laird, C.D.5    Hansen, R.S.6
  • 32
    • 45349086923 scopus 로고    scopus 로고
    • Global mapping of DNA methylation in mouse promoters reveals epigenetic reprogramming of pluripotency genes
    • Farthing CR, Ficz G, Ng RK, Chan CF, Andrews S, Dean W, et al. Global mapping of DNA methylation in mouse promoters reveals epigenetic reprogramming of pluripotency genes. PLoS Gene 2008; 4:1000116.
    • (2008) PLoS Gene , vol.4 , pp. 1000116
    • Farthing, C.R.1    Ficz, G.2    Ng, R.K.3    Chan, C.F.4    Andrews, S.5    Dean, W.6
  • 33
    • 33847198958 scopus 로고    scopus 로고
    • Sleeping beauty transposase has an affinity for heterochromatin conformation
    • Ikeda R, Kokubu C, Yusa K, Keng VW, Horie K, Takeda J. Sleeping beauty transposase has an affinity for heterochromatin conformation. Mol Cell Biol 2007; 27:1665-76.
    • (2007) Mol Cell Biol , vol.27 , pp. 1665-1676
    • Ikeda, R.1    Kokubu, C.2    Yusa, K.3    Keng, V.W.4    Horie, K.5    Takeda, J.6
  • 34
    • 61349143203 scopus 로고    scopus 로고
    • Prognostic implications of and relationship between CpG island hypermethylation and repetitive DNA hypomethylation in hepatocellular carcinoma
    • Lee HS, Kim BH, Cho NY, Yoo EJ, Choi M, Shin SH, et al. Prognostic implications of and relationship between CpG island hypermethylation and repetitive DNA hypomethylation in hepatocellular carcinoma. Clin Cancer Res 2009; 15:812-20.
    • (2009) Clin Cancer Res , vol.15 , pp. 812-820
    • Lee, H.S.1    Kim, B.H.2    Cho, N.Y.3    Yoo, E.J.4    Choi, M.5    Shin, S.H.6
  • 37
    • 70349774458 scopus 로고    scopus 로고
    • The L1 retrotransposition assay: A retrospective and toolkit
    • Rangwala SH, Kazazian HH Jr. The L1 retrotransposition assay: A retrospective and toolkit. Methods 2009; 49:219-26.
    • (2009) Methods , vol.49 , pp. 219-226
    • Rangwala, S.H.1    Kazazian Jr., H.H.2
  • 38
    • 29244487057 scopus 로고    scopus 로고
    • Gene transfer into human hematopoietic progenitor cells with an episomal vector carrying an S/MAR element
    • Papapetrou EP, Ziros PG, Micheva ID, Zoumbos NC, Athanassiadou A. Gene transfer into human hematopoietic progenitor cells with an episomal vector carrying an S/MAR element. Gene Ther 2006; 13:40-51.
    • (2006) Gene Ther , vol.13 , pp. 40-51
    • Papapetrou, E.P.1    Ziros, P.G.2    Micheva, I.D.3    Zoumbos, N.C.4    Athanassiadou, A.5
  • 39
    • 0842307053 scopus 로고    scopus 로고
    • An episomal mammalian replicon: Sequence-independent binding of the origin recognition complex
    • Schaarschmidt D, Baltin J, Stehle IM, Lipps HJ, Knippers R. An episomal mammalian replicon: sequence-independent binding of the origin recognition complex. EMBO J 2004; 23:191-201.
    • (2004) EMBO J , vol.23 , pp. 191-201
    • Schaarschmidt, D.1    Baltin, J.2    Stehle, I.M.3    Lipps, H.J.4    Knippers, R.5
  • 40
    • 14544277626 scopus 로고    scopus 로고
    • Origin recognition and the chromosome cycle
    • Stillman B. Origin recognition and the chromosome cycle. FEBS Lett 2005; 579:877-84.
    • (2005) FEBS Lett , vol.579 , pp. 877-884
    • Stillman, B.1
  • 41
    • 0036705432 scopus 로고    scopus 로고
    • Extrachromosomal plasmid vectors for gene therapy
    • Stoll SM, Calos MP. Extrachromosomal plasmid vectors for gene therapy. Curr Opin Mol Ther 2002; 4:299-305.
    • (2002) Curr Opin Mol Ther , vol.4 , pp. 299-305
    • Stoll, S.M.1    Calos, M.P.2
  • 42
    • 33749260340 scopus 로고    scopus 로고
    • Designing nonviral vectors for efficient gene transfer and long-term gene expression
    • Jackson DA, Juranek S, Lipps HJ. Designing nonviral vectors for efficient gene transfer and long-term gene expression. Mol Ther 2006; 14:613-26.
    • (2006) Mol Ther , vol.14 , pp. 613-626
    • Jackson, D.A.1    Juranek, S.2    Lipps, H.J.3
  • 43
    • 0034637528 scopus 로고    scopus 로고
    • A distinct sequence (ATA AA)n separates methylated and unmethylated domains at the 5'-end of the GSTP1 CpG island
    • Millar DS, Paul CL, Molloy PL, Clark SJ. A distinct sequence (ATA AA)n separates methylated and unmethylated domains at the 5'-end of the GSTP1 CpG island. J Biol Chem 2000; 275:24893-9.
    • (2000) J Biol Chem , vol.275 , pp. 24893-24899
    • Millar, D.S.1    Paul, C.L.2    Molloy, P.L.3    Clark, S.J.4
  • 44
    • 69849108458 scopus 로고    scopus 로고
    • Control of chicken CR1 retrotransposons is independent of Dicer-mediated RNA interference pathway
    • Lee SH, Eldi P, Cho SY, Rangasamy D. Control of chicken CR1 retrotransposons is independent of Dicer-mediated RNA interference pathway. BMC Biol 2009; 7:53.
    • (2009) BMC Biol , vol.7 , pp. 53
    • Lee, S.H.1    Eldi, P.2    Cho, S.Y.3    Rangasamy, D.4
  • 45
    • 33746745365 scopus 로고    scopus 로고
    • Absolute and relative QPCR quantification of plasmid copy number in Escherichia coli
    • Lee C, Kim J, Shin SG, Hwang S. Absolute and relative QPCR quantification of plasmid copy number in Escherichia coli. J Biotechnol 2006; 123:273-80.
    • (2006) J Biotechnol , vol.123 , pp. 273-280
    • Lee, C.1    Kim, J.2    Shin, S.G.3    Hwang, S.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.