DNA methylation detection using MS-qFRET, a quantum dot-based nanoassay

Methods

Volumn 52, Issue 3, 2010, Pages 237-241

  Bailey, Vasudev J ^a,b   Keeley, Brian P ^a   Razavi, Christopher R ^a   Griffiths, Elizabeth ^b   Carraway, Hetty E ^b   Wang, Tza Huei ^a,c  

^a JOHNS HOPKINS UNIVERSITY SCHOOL OF MEDICINE   (United States)

^b JOHNS HOPKINS UNIVERSITY   (United States)

^c Johns Hopkins University   (United States)

Author keywords

DNA methylation; Nanotechnology; Promoter hypermethylation; QD FRET; Quantum dots

Indexed keywords

CYCLIN DEPENDENT KINASE INHIBITOR 2B; DNA; QUANTUM DOT;

ACUTE GRANULOCYTIC LEUKEMIA; CLINICAL ARTICLE; CONTROLLED STUDY; DNA DETERMINATION; DNA METHYLATION; DNA TEMPLATE; FLUORESCENCE RESONANCE ENERGY TRANSFER; HUMAN; HUMAN CELL; NANOTECHNOLOGY; PRIORITY JOURNAL; REVIEW;

DNA METHYLATION; FLUORESCENCE RESONANCE ENERGY TRANSFER; HUMANS; LEUKEMIA, MYELOID, ACUTE; NANOTECHNOLOGY; QUANTUM DOTS;

EID: 78049425259     PISSN: 10462023     EISSN: 10959130     Source Type: Journal    
DOI: 10.1016/j.ymeth.2010.03.007     Document Type: Review

References (34)

1. Bird A. Genes Dev. 2002, 16:6-21.
2. Laird P.W. Nat. Rev. Cancer 2003, 3:253-266.
3. Baylin S.B., Ohm J.E. Nat. Rev. Cancer 2006, 6:107-116.
4. Herman J.G., Baylin S.B. N. Engl. J. Med. 2003, 349:2042-2054.
5. Esteller M., Catasus L., Matias-Guiu X., Mutter G.L., Prat J., Baylin S.B., Herman J.G. Am. J. Pathol. 1999, 155:1767-1772.
6. Esteller M., Garcia-Foncillas J., Andion E., Goodman S.N., Hidalgo O.F., Vanaclocha V., Baylin S.B., Herman J.G. N. Engl. J. Med. 2000, 343:1350-1354.
7. Gore S.D., Baylin S., Sugar E., Carraway H., Miller C.B., Carducci M., Grever M., Galm O., Dauses T., Karp J.E., Rudek M.A., Zhao M., Smith B.D., Manning J., Jiemjit A., Dover G., Mays A., Zwiebel J., Murgo A., Weng L.J., Herman J.G. Cancer Res. 2006, 66:6361-6369.
8. Brock M.V., Hooker H.C., Ota-Machida E., Han Y., Guo M., Ames S., Glöckner S., Piantadosi S., Gabrielson E., Pridham G., Pelosky K., Belinsky S.A., Yang S.C., Baylin S.B., Herman J.G. N. Engl. J. Med. 2008, 358:1118-1128.
9. Jones P.A., Laird P.W. Nat. Genet. 1999, 21:163-167.
10. Herman J.G., Graff J.R., Myohanen S., Nelkin B.D., Baylin S.B. Proc. Natl. Acad. Sci. USA 1996, 93:9821-9826.
11. Eads C.A., Danenberg K.D., Kawakami K., Saltz L.B., Blake C., Shibata D., Danenberg P.V., Laird P.W. Nucleic Acids Res. 2000, 28:E32.
12. Bailey V.J., Easwaran H., Zhang Y., Griifiths E., Beliknsy S., Herman J.G., Baylin S.B., Carraway H.E., Wang T.-H. Genome Res. 2009, 19:1455-1461.
13. Zhang C.Y., Yeh H.C., Kuroki M.T., Wang T.H. Nat. Mater. 2005, 4:826-831.
14. Herman J.G., Civin C.I., Issa J.P., Collector M.I., Sharkis S.J., Baylin S.B. Cancer Res. 1997, 57:837-841.
15. Cameron E.E., Baylin S.B., Herman J.G. Blood 1999, 94:2445-2451.
16. Herman J.G., Jen J., Merlo A., Baylin S.B. Cancer Res. 1996, 56:722-727.
17. Tien H.F., Tang J.H., Tsay W., Liu M.C., Lee F.Y., Wang C.H., Chen Y.C., Shen M.C. Br. J. Haematol. 2001, 112:148-154.
18. Uchida T., Kinoshita T., Nagai H., Nakahara Y., Saito H., Hotta T., Murate T. Blood 1997, 90:1403-1409.
19. Melki J.R., Vincent P.C., Clark S.J. Cancer Res. 1999, 59:3730-3740.
20. Galm O., Wilop S., Luders C., Jost E., Gehbauer G., Herman J.G., Osieka R. Ann. Hematol. 2005, 84(Suppl. 1):39-46.
21. Esteller M., Fraga M.F., Paz M.F., Campo E., Colomer D., Novo F.J., Calasanz M.J., Galm O., Guo M., Benitez J., Herman J.G. Science 2002, 297:1807-1808. Discussion 07-8.
22. Baylin S.B. Nat. Clin. Pract. Oncol. 2005, 2(Suppl. 1):S4-S11.
23. Baylin S.B., Mufti G.J. Nat. Clin. Pract. Oncol. 2005, 2(Suppl. 1):S1-S3.
24. Brueckner B., Kuck D., Lyko F. Cancer J. 2007, 13:17-22.
25. Leone G., Voso M.T., Teofili L., Lubbert M. Clin. Immunol. 2003, 109:89-102.
26. Lyko F., Brown R. J. Natl. Cancer Inst. 2005, 97:1498-1506.
27. Murgo A.J. Semin. Oncol. 2005, 32:458-464.
28. Gore S.D., Hermes-DeSantis E.R. Cancer Control 2008, 15(Suppl.):40-49.
29. Stresemann C., Bokelmann I., Mahlknecht U., Lyko F. Mol. Cancer Ther. 2008, 7:2998-3005.
30. Jones P.A., Taylor S.M. Cell 1980, 20:85-93.
31. Cameron E.E., Bachman K.E., Myohanen S., Herman J.G., Baylin S.B. Nat. Genet. 1999, 21:103-107.
32. Medintz I.L., Clapp A.R., Mattoussi H., Goldman E.R., Fisher B., Mauro J.M. Nat. Mater. 2003, 2:630-638.
33. Bailey V.J., Lim T.C., Ho Y.P., Wang T.H. Nanotechnology 2008, 19.
34. Bailey V.J., Keeley B.P., Zhang Y., Ho Y.P., Easwaran H., Brock M.V., Pelosky K.L., Carraway H.E., Baylin S.B., Herman J.G., Wang T.H. Chembiochem 2010, 11:71-74.