Polymorphisms in bovine immune genes and their associations with somatic cell count and milk production in dairy cattle

BMC Genetics

Volumn 11, Issue , 2010, Pages

  Beecher, Christine ^a,b   Daly, Mairead ^a   Childs, Stuart ^a   Berry, Donagh P ^c   Magee, David A ^d   McCarthy, Tommie V ^b   Giblin, Linda ^a  

^a TEAGASC FOOD RESEARCH CENTRE   (Ireland)

^b UNIVERSITY COLLEGE CORK   (Ireland)

^c ANIMAL AND GRASSLAND RESEARCH AND INNOVATION CENTRE   (Ireland)

^d UNIVERSITY COLLEGE DUBLIN   (Ireland)

Author keywords

[No Author keywords available]

Indexed keywords

CHEMOKINE RECEPTOR CX3CR1; MILK FAT; MILK PROTEIN; TOLL LIKE RECEPTOR 2; CHEMOKINE RECEPTOR CXCR1;

ARTICLE; BULL (BOVINE); CATTLE FARMING; DAIRY CATTLE; FAT CONTENT; FEMALE; GENE; GENETIC ASSOCIATION; GENETIC POLYMORPHISM; GENOTYPE; LACTATION; MAMMARY GLAND FUNCTION; MILK PRODUCTION; NONHUMAN; PROTEIN ANALYSIS; SERPINA1 GENE; SOMATIC CELL GENETICS; ANIMAL; BOVINE MASTITIS; CATTLE; DNA SEQUENCE; GENE FREQUENCY; GENETICS; MALE; MILK; PHENOTYPE;

BOS; BOVINAE; FRIESIA;

ANIMALS; CATTLE; FEMALE; GENE FREQUENCY; GENOTYPE; LACTATION; MALE; MASTITIS, BOVINE; MILK; MILK PROTEINS; PHENOTYPE; POLYMORPHISM, GENETIC; RECEPTORS, INTERLEUKIN-8A; SEQUENCE ANALYSIS, DNA; TOLL-LIKE RECEPTOR 2;

EID: 78049367108     PISSN: None     EISSN: 14712156     Source Type: Journal    
DOI: 10.1186/1471-2156-11-99     Document Type: Article

References (41)

1. SABRE Cutting edge genomics for sustainable animal breeding. Cutting edge genomics for sustainable animal breeding 2006, Farm Animal Genetics and Genomics Faraday Partnership Ltd, SABRE.
2. Berry DP, Harris BL, Winkelman AM, Montgomerie W. Phenotypic associations between traits other than production and longevity in New Zealand dairy cattle. J Dairy Sci 2005, 88:2962-2974. 10.3168/jds.S0022-0302(05)72976-3, 16027210.
3. Berry DP, Amer PR. Derivation of a health sub-index for the Economic Breeding Index in Ireland. Technical Report to the Irish Cattle Breeding Federation (August) , http://www.icbf.com/publications/files/Derivation_of_health_sub-index_with_loco.doc
4. Bartlett PC, van Wijk J, Wilson DJ, Green CD, Miller GY, Majewski GA, Heider LE. Temporal patterns of lost milk production following clinical mastitis in a large Michigan Holstein herd. J Dairy Sci 1991, 74:1561-1572. 10.3168/jds.S0022-0302(91)78318-5, 1880266.
5. LeBlanc SJ, Lissemore KD, Kelton DF, Duffield TF, Leslie KE. Major advances in disease prevention in dairy cattle. J Dairy Sci 2006, 89:1267-1279. 10.3168/jds.S0022-0302(06)72195-6, 16537959.
6. Hayes BJ, Bowman PJ, Chamberlain AJ, Goddard ME. Invited review: Genomic selection in dairy cattle: progress and challenges. J Dairy Sci 2009, 92:433-443. 10.3168/jds.2008-1646, 19164653.
7. Heringstad B, Klemetsdal G, Ruane J. Selection for mastitis resistance in dairy cattle: a review with focus on the situation in the Nordic countries. Livest Prod Sci 2000, 64:95-106.
8. Rupp R, Bergonier D, Dion S, Hygonenq MC, Aurel MR, Robert-Granie C, Foucras G. Response to somatic cell count-based selection for mastitis resistance in a divergent selection experiment in sheep. J Dairy Sci 2009, 92:1203-1219. 10.3168/jds.2008-1435, 19233814.
9. Ogorevc J, Kunej T, Razpet A, Dovc P. Database of cattle candidate genes and genetic markers for milk production and mastitis. Anim Genet 2009, 40:832-851. 10.1111/j.1365-2052.2009.01921.x, 2779988, 19508288.
10. Mai MD, Sahana G, Christiansen FB, Guldbrandtsen B. A genome wide association study for milk production traits in Danish Jersey cattle using a 50 K SNP chip. J Anim Sci 88:3522-3528. 10.2527/jas.2009-2713, 20656975.
11. Van Eenennaam AL, Li J, Thallman RM, Quaas RL, Dikeman ME, Gill CA, Franke DE, Thomas MG. Validation of commercial DNA tests for quantitative beef quality traits. J Anim Sci 2007, 85:891-900. 10.2527/jas.2006-512, 17178813.
12. Oviedo-Boyso J, Valdez-Alarcon JJ, Cajero-Juarez M, Ochoa-Zarzosa A, Lopez-Meza JE, Bravo-Patino A, Baizabal-Aguirre VM. Innate immune response of bovine mammary gland to pathogenic bacteria responsible for mastitis. J Infect 2007, 54:399-409. 10.1016/j.jinf.2006.06.010, 16882453.
13. Akira S, Takeda K. Toll-like receptor signalling. Nat Rev Immunol 2004, 4:499-511. 10.1038/nri1391, 15229469.
14. White SN, Taylor KH, Abbey CA, Gill CA, Womack JE. Haplotype variation in bovine Toll-like receptor 4 and computational prediction of a positively selected ligand-binding domain. Proc Natl Acad Sci USA 2003, 100:10364-10369. 10.1073/pnas.1333957100, 193567, 12915733.
15. Sharma BS, Leyva I, Schenkel F, Karrow NA. Association of toll-like receptor 4 polymorphisms with somatic cell score and lactation persistency in Holstein bulls. J Dairy Sci 2006, 89:3626-3635. 10.3168/jds.S0022-0302(06)72402-X, 16899698.
16. Goldammer T, Zerbe H, Molenaar A, Schuberth HJ, Brunner RM, Kata SR, Seyfert HM. Mastitis increases mammary mRNA abundance of beta-defensin 5, toll-like-receptor 2 (TLR2), and TLR4 but not TLR9 in cattle. Clin Diagn Lab Immunol 2004, 11:174-185. 321333, 14715566.
17. Zheng J, Watson AD, Kerr DE. Genome-wide expression analysis of lipopolysaccharide-induced mastitis in a mouse model. Infect Immun 2006, 74:1907-1915. 10.1128/IAI.74.3.1907-1915.2006, 1418644, 16495566.
18. Youngerman SM, Saxton AM, Oliver SP, Pighetti GM. Association of CXCR2 polymorphisms with subclinical and clinical mastitis in dairy cattle. J Dairy Sci 2004, 87:2442-2448. 10.3168/jds.S0022-0302(04)73367-6, 15328266.
19. Damaj BB, McColl SR, Neote K, Songqing N, Ogborn KT, Hebert CA, Naccache PH. Identification of G-protein binding sites of the human interleukin-8 receptors by functional mapping of the intracellular loops. FASEB J 1996, 10:1426-1434.
20. Rambeaud M, Pighetti GM. Impaired neutrophil migration associated with specific bovine CXCR2 genotypes. Infect Immun 2005, 73:4955-4959. 10.1128/IAI.73.8.4955-4959.2005, 1201266, 16041010.
21. Jin MS, Lee JO. Structures of the toll-like receptor family and its ligand complexes. Immunity 2008, 29:182-191. 10.1016/j.immuni.2008.07.007, 18701082.
22. Ibeagha-Awemu EM, Lee JW, Ibeagha AE, Zhao X. Bovine CD14 gene characterization and relationship between polymorphisms and surface expression on monocytes and polymorphonuclear neutrophils. BMC Genet 2008, 9:50. 10.1186/1471-2156-9-50, 2536669, 18691417.
23. Martinon F, Tschopp J. NLRs join TLRs as innate sensors of pathogens. Trends Immunol 2005, 26:447-454. 10.1016/j.it.2005.06.004, 15967716.
24. Ogura Y, Inohara N, Benito A, Chen FF, Yamaoka S, Nunez G. Nod2, a Nod1/Apaf-1 family member that is restricted to monocytes and activates NF-kappaB. J Biol Chem 2001, 276:4812-4818. 10.1074/jbc.M008072200, 11087742.
25. Pant SD, Schenkel FS, Leyva-Baca I, Sharma BS, Karrow NA. Identification of single nucleotide polymorphisms in bovine CARD15 and their associations with health and production traits in Canadian Holsteins. BMC Genomics 2007, 8:421. 10.1186/1471-2164-8-421, 2234259, 18005441.
26. Zlotnik A, Morales J, Hedrick JA. Recent advances in chemokines and chemokine receptors. Crit Rev Immunol 1999, 19:1-47.
27. Heaton MP, Chitko-McKnown CG, Grosse WM, Keele JW, Keen JE, Laegreid WW. Interleukin-8 haplotype structure from nucleotide sequence variation in commercial populations of U.S. beef cattle. Mamm Genome 2001, 12:219-226. 10.1007/s003350010269, 11252171.
28. Leyva-Baca I, Schenkel F, Sharma BS, Jansen GB, Karrow NA. Identification of single nucleotide polymorphisms in the bovine CCL2, IL8, CCR2 and IL8RA genes and their association with health and production in Canadian Holsteins. Anim Genet 2007, 38:198-202. 10.1111/j.1365-2052.2007.01588.x, 17433017.
29. Chowanadisai W, Lonnerdal B. Alpha(1)-antitrypsin and antichymotrypsin in human milk: origin, concentrations, and stability. Am J Clin Nutr 2002, 76:828-833.
30. Khatib H, Heifetz E, Dekkers JC. Association of the protease inhibitor gene with production traits in Holstein dairy cattle. J Dairy Sci 2005, 88:1208-1213. 10.3168/jds.S0022-0302(05)72787-9, 15738254.
31. Washburn SP, White SL, Green JT, Benson GA. Reproduction, mastitis, and body condition of seasonally calved Holstein and Jersey cows in confinement or pasture systems. J Dairy Sci 2002, 85:105-111. 10.3168/jds.S0022-0302(02)74058-7, 11860102.
32. Walsh S, Buckley F, Berry DP, Rath M, Pierce K, Byrne N, Dillon P. Effects of breed, feeding system, and parity on udder health and milking characteristics. J Dairy Sci 2007, 90:5767-5779. 10.3168/jds.2007-0389, 18024771.
33. Goertz I, Baes C, Weimann C, Reinsch N, Erhardt G. Association between single nucleotide polymorphisms in the CXCR1 gene and somatic cell score in Holstein dairy cattle. J Dairy Sci 2009, 92:4018-4022. 10.3168/jds.2008-1536, 19620685.
34. Ma Y, Ryan C, Barbano DM, Galton DM, Rudan MA, Boor KJ. Effects of somatic cell count on quality and shelf-life of pasteurized fluid milk. J Dairy Sci 2000, 83:264-274. 10.3168/jds.S0022-0302(00)74873-9, 10714859.
35. Gerhardt CC, Romero IA, Cancello R, Camoin L, Strosberg AD. Chemokines control fat accumulation and leptin secretion by cultured human adipocytes. Mol Cell Endocrinol 2001, 175:81-92. 10.1016/S0303-7207(01)00394-X, 11325518.
36. Tanaka T, Itoh H, Doi K, Fukunaga Y, Hosoda K, Shintani M, Yamashita J, Chun TH, Inoue M, Masatsugu K, et al. Down regulation of peroxisome proliferator-activated receptorgamma expression by inflammatory cytokines and its reversal by thiazolidinediones. Diabetologia 1999, 42:702-710. 10.1007/s001250051218, 10382590.
37. Bionaz M, Loor JJ. Gene networks driving bovine milk fat synthesis during the lactation cycle. BMC Genomics 2008, 9:366. 10.1186/1471-2164-9-366, 2547860, 18671863.
38. Berry DP, Shalloo L, Cromie AR, Veerkamp RF, Dillion P, Amer PR, Kearney JF, Evans RD, Wickham B. The economic breeding index: a generation on. Irish Cattle Breeding Federation 2007, 29-34.
39. Berry DP, Kearney F, Harris B. Genomic selection in Ireland. Interbull International Workshop; Uppsala, Sweden 2009,
40. Harris B, Johnson D. Approximate reliability of genetic evaluations under an animal model. J Dairy Sci 1998, 81:2723-2728. 10.3168/jds.S0022-0302(98)75829-1, 9812277.
41. Gilmour AR, Cullis BR, Welham SJ, Thompson R. 2009, ASREML Reference Manual.: New South Wales Agriculture, Orange Agricultural Institute, Orange, NSW, Australia.