-
1
-
-
17344372249
-
Modified oligonucleotides: synthesis and strategy for users
-
Verma,S. and Eckstein,F. (1998) Modified oligonucleotides: synthesis and strategy for users. Annu. Rev. Biochem., 67, 99-134.
-
(1998)
Annu. Rev. Biochem.
, vol.67
, pp. 99-134
-
-
Verma, S.1
Eckstein, F.2
-
2
-
-
0026108692
-
Light-directed, spatially addressable parallel chemical synthesis
-
Fodor,S.P., Read,J.L., Pirrung,M.C., Stryer,L., Lu,A.T. and Solas,D. (1991) Light-directed, spatially addressable parallel chemical synthesis. Science, 251, 767-773.
-
(1991)
Science
, vol.251
, pp. 767-773
-
-
Fodor, S.P.1
Read, J.L.2
Pirrung, M.C.3
Stryer, L.4
Lu, A.T.5
Solas, D.6
-
3
-
-
0032085014
-
Analysing genetic information with DNA arrays
-
Case-Green,S.C., Mir,K.U., Pritchard,C.E. and Southern,E.M. (1998) Analysing genetic information with DNA arrays. Curr. Opin. Chem. Biol., 2, 404-410.
-
(1998)
Curr. Opin. Chem. Biol.
, vol.2
, pp. 404-410
-
-
Case-Green, S.C.1
Mir, K.U.2
Pritchard, C.E.3
Southern, E.M.4
-
4
-
-
84984933234
-
High density synthetic oligonucleotide arrays
-
Lipshutz,R.J., Fodor,S.P., Gingeras,T.R. and Lockhart,D.J. (1999) High density synthetic oligonucleotide arrays. Nat. Genet., 21, 20-24.
-
(1999)
Nat. Genet.
, vol.21
, pp. 20-24
-
-
Lipshutz, R.J.1
Fodor, S.P.2
Gingeras, T.R.3
Lockhart, D.J.4
-
6
-
-
0032750623
-
Triple helix formation and the antigene strategy for sequence-specific control of gene expression
-
Praseuth,D., Guieysse,A.L. and Héléne,C. (1999) Triple helix formation and the antigene strategy for sequence-specific control of gene expression. Biochim. Biophys. Acta, 1498, 181-206.
-
(1999)
Biochim. Biophys. Acta
, vol.1498
, pp. 181-206
-
-
Praseuth, D.1
Guieysse, A.L.2
Héléne, C.3
-
7
-
-
0033812002
-
Heterocyclic modifications of oligonucleotides and antisense technology
-
Herdewijn,P. (2000) Heterocyclic modifications of oligonucleotides and antisense technology. Antisense Nucleic Acid Drug Dev., 10, 297-310.
-
(2000)
Antisense Nucleic Acid Drug Dev.
, vol.10
, pp. 297-310
-
-
Herdewijn, P.1
-
8
-
-
0037733977
-
Antisense technologies Improvement through novel chemical modifications
-
Kurreck,J. (2003) Antisense technologies. Improvement through novel chemical modifications. Eur. J. Biochem., 270, 1628-1644.
-
(2003)
Eur. J. Biochem.
, vol.270
, pp. 1628-1644
-
-
Kurreck, J.1
-
9
-
-
0344033606
-
Recent improvements in antigene technology
-
Buchini,S. and Leumann,C.J. (2003) Recent improvements in antigene technology. Curr. Opin. Chem. Biol., 7, 717-726.
-
(2003)
Curr. Opin. Chem. Biol.
, vol.7
, pp. 717-726
-
-
Buchini, S.1
Leumann, C.J.2
-
10
-
-
60149094505
-
RNA interference: from basic research to therapeutic applications
-
Kurreck,J. (2009) RNA interference: from basic research to therapeutic applications. Angew Chem. Int. Ed. Engl., 48, 1378-1398.
-
(2009)
Angew Chem. Int. Ed. Engl.
, vol.48
, pp. 1378-1398
-
-
Kurreck, J.1
-
11
-
-
14844351976
-
Amino-functionalized DNA: the properties of C5-amino-alkyl substituted 20-deoxyuridines and their application in DNA triplex formation
-
Brazier,J.A., Shibata,T., Townsley,J., Taylor,B.F., Frary,E., Williams,N.H. and Williams,D.M. (2005) Amino-functionalized DNA: the properties of C5-amino-alkyl substituted 20-deoxyuridines and their application in DNA triplex formation. Nucleic Acids Res., 33, 1362-1371.
-
(2005)
Nucleic Acids Res.
, vol.33
, pp. 1362-1371
-
-
Brazier, J.A.1
Shibata, T.2
Townsley, J.3
Taylor, B.F.4
Frary, E.5
Williams, N.H.6
Williams, D.M.7
-
12
-
-
33747622548
-
8-Dihydropyrido[2 3-d]pyrimidin-2-one; a bicyclic cytosine analogue capable of enhanced stabilisation of DNA duplexes
-
Shibata,T., Buurma,N.J., Brazier,J.A., Thompson,P., Haq,I. and Williams,D.M. (2006) 7,8-Dihydropyrido[2,3-d]pyrimidin-2-one; a bicyclic cytosine analogue capable of enhanced stabilisation of DNA duplexes. Chem. Commun., 33, 3516-3518.
-
(2006)
Chem. Commun.
, vol.7
, pp. 3516-3518
-
-
Shibata, T.1
Buurma, N.J.2
Brazier, J.A.3
Thompson, P.4
Haq, I.5
Williams, D.M.6
-
13
-
-
0031059866
-
Processing of X-ray diffraction data collected in oscillation mode
-
Otwinowski,Z. and Minor,W. (1997) Processing of X-ray diffraction data collected in oscillation mode. Meth. Enzymol., 276, 307-326.
-
(1997)
Meth. Enzymol.
, vol.276
, pp. 307-326
-
-
Otwinowski, Z.1
Minor, W.2
-
14
-
-
84920325457
-
AMoRe: an automated package for molecular replacement
-
Navaza,J. (1994) AMoRe: an automated package for molecular replacement. Acta Crytallogr. A, 50, 157-163.
-
(1994)
Acta Crytallogr. A
, vol.50
, pp. 157-163
-
-
Navaza, J.1
-
15
-
-
0034647435
-
A new crystal form for the dodecamer C-G-C-G-A-A-T-T-C-G-C-G: symmetry effects on sequence-dependent DNA structure
-
Johansson,E., Parkinson,G. and Neidle,S. (2000) A new crystal form for the dodecamer C-G-C-G-A-A-T-T-C-G-C-G: symmetry effects on sequence-dependent DNA structure. J. Mol. Biol., 300, 551-561.
-
(2000)
J. Mol. Biol.
, vol.300
, pp. 551-561
-
-
Johansson, E.1
Parkinson, G.2
Neidle, S.3
-
16
-
-
0032499635
-
The B-DNA dodecamer at high resolution reveals a spine of water on sodium
-
Shui,X., McFail-Isom,L., Hu,G.G. and Williams,L.D. (1998) The B-DNA dodecamer at high resolution reveals a spine of water on sodium. Biochemistry, 37, 8341-8355.
-
(1998)
Biochemistry
, vol.37
, pp. 8341-8355
-
-
Shui, X.1
McFail-Isom, L.2
Hu, G.G.3
Williams, L.D.4
-
17
-
-
3543012707
-
Crystallography & NMR system: A new software suite for macromolecular structure determination
-
Brü nger,A.T., Adams,P.D., Clore,G.M., DeLano,W.L., Gros,P., Grosse-Kunstleve,R.W., Jiang,J.S., Kuszewski,J., Nilges,M., Pannu,N.S. et al. (1998) Crystallography & NMR system: A new software suite for macromolecular structure determination. Acta Crystallogr. D Biol. Crystallogr., 54, 905-921.
-
(1998)
Acta Crystallogr. D Biol. Crystallogr.
, vol.54
, pp. 905-921
-
-
Brünger, A.T.1
Adams, P.D.2
Clore, G.M.3
DeLano, W.L.4
Gros, P.5
Grosse-Kunstleve, R.W.6
Jiang, J.S.7
Kuszewski, J.8
Nilges, M.9
Pannu, N.S.10
-
18
-
-
0242396923
-
3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures
-
Lu,X.J. and Olson,W.K. (2003) 3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures. Nucleic Acids Res., 31, 5108-5121.
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 5108-5121
-
-
Lu, X.J.1
Olson, W.K.2
-
19
-
-
0034669632
-
Cations mediate B-DNA conformational heterogeneity
-
Sines,C.C., McFail-Isom,L., Howerton,S.B., VanDerveer,D. and Williams,L.D. (2000) Cations mediate B-DNA conformational heterogeneity. J. Am. Chem. Soc., 122, 11048-11056.
-
(2000)
J. Am. Chem. Soc.
, vol.122
, pp. 11048-11056
-
-
Sines, C.C.1
McFail-Isom, L.2
Howerton, S.B.3
VanDerveer, D.4
Williams, L.D.5
-
20
-
-
0031768808
-
The structure of the most studied DNA fragment changes under the influence of ions: a new packing of d(CGCGAATTCGCG)
-
Liu,J., Malinina,L., Huynh-Dinh,T. and Subirana,J.A. (1998) The structure of the most studied DNA fragment changes under the influence of ions: a new packing of d(CGCGAATTCGCG). FEBS Lett., 438, 211-214.
-
(1998)
FEBS Lett
, vol.438
, pp. 211-214
-
-
Liu, J.1
Malinina, L.2
Huynh-Dinh, T.3
Subirana, J.A.4
-
22
-
-
0035850731
-
A standard reference frame for the description of nucleic acid base-pair geometry
-
Olson,W.K., Bansal,M., Burley,S.K., Dickerson,R.E., Gerstein,M., Harvey,S.C., Heinemann,U., Lu,X.J., Neidle,S., Shakked,Z. et al. (2001) A standard reference frame for the description of nucleic acid base-pair geometry. J. Mol. Biol., 313, 229-237.
-
(2001)
J. Mol. Biol.
, vol.313
, pp. 229-237
-
-
Olson, W.K.1
Bansal, M.2
Burley, S.K.3
Dickerson, R.E.4
Gerstein, M.5
Harvey, S.C.6
Heinemann, U.7
Lu, X.J.8
Neidle, S.9
Shakked, Z.10
-
23
-
-
78049409049
-
-
Kodansha Ltd, Tokyo
-
Sasada,Y. and Takénaka,A. (1989) Molecular Science in Crystals, Directionality of Hydrogen Bonds. Kodansha Ltd, Tokyo, pp. 90-104.
-
(1989)
Molecular Science in Crystals, Directionality of Hydrogen Bonds
, pp. 90-104
-
-
Sasada, Y.1
Takénaka, A.2
-
24
-
-
0020674698
-
Base-stacking and base-pairing contributions to helix stability: thermodynamics of double helix formation with CCGG, CCGGp, CCGGAp, ACCG Gp CCGGUp and ACCGGUp
-
Petersheim,M. and Turner,D.H. (1983) Base-stacking and base-pairing contributions to helix stability: thermodynamics of double helix formation with CCGG, CCGGp, CCGGAp, ACCG Gp, CCGGUp and ACCGGUp. Biochemistry, 22, 256-263.
-
(1983)
Biochemistry
, vol.22
, pp. 256-263
-
-
Petersheim, M.1
Turner, D.H.2
-
25
-
-
0034194135
-
Thermodynamic parameters for DNA sequences with dangling ends
-
Bommarito,S., Peyret,N. and Santa Lucia,J. (2000) Thermodynamic parameters for DNA sequences with dangling ends. Nucleic Acids Res., 28, 1929-1934.
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 1929-1934
-
-
Bommarito, S.1
Peyret, N.2
Santa Lucia, J.3
-
26
-
-
0004014257
-
-
Department of Biochemistry and Molecular Biology, University College London
-
Hubbard,S.J. and Thornton,J.M. (1993) NACCESS. Department of Biochemistry and Molecular Biology, University College London.
-
(1993)
NACCESS
-
-
Hubbard, S.J.1
Thornton, J.M.2
-
27
-
-
0000112594
-
Secondary structure in poly-ribothymidylic acid
-
Shugar,D. and Szer,W. (1962) Secondary structure in poly-ribothymidylic acid. J. Mol. Biol, 5, 480-582.
-
(1962)
J. Mol. Biol
, vol.5
, pp. 480-582
-
-
Shugar, D.1
Szer, W.2
-
28
-
-
0028904989
-
Origins of the large differences in stability of DNA and RNA helices; C-5 methyl and 2′-hydroxyl effects
-
Wang,S.H. and Kool,E.T. (1995) Origins of the large differences in stability of DNA and RNA helices; C-5 methyl and 2′-hydroxyl effects. Biochemistry, 34, 4125-4132.
-
(1995)
Biochemistry
, vol.34
, pp. 4125-4132
-
-
Wang, S.H.1
Kool, E.T.2
-
29
-
-
0035477783
-
Crystallographic studies on damaged DNAs IV. N4-methoxycytosine shows a second face for Watson-Crick base-pairing, leading to purine transition mutagenesis
-
Hossain,M.T., Sunami,T., Tsunoda,M., Hikima,T., Chatake,T., Ueno,Y., Matsuda,A. and Takénaka,A. (2001) Crystallographic studies on damaged DNAs IV. N4-methoxycytosine shows a second face for Watson-Crick base-pairing, leading to purine transition mutagenesis. Nucleic Acids Res., 29, 3949-2954.
-
(2001)
Nucleic Acids Res.
, vol.29
, pp. 3949-12954
-
-
Hossain, M.T.1
Sunami, T.2
Tsunoda, M.3
Hikima, T.4
Chatake, T.5
Ueno, Y.6
Matsuda, A.7
Takénaka, A.8
-
30
-
-
0032500628
-
A thymine-like base analogues forms wobble pairs with adenine in a Z-DNA duplex
-
Schuerman,G.S., Van,L., Loakes,D., Brown,D.M., Kong Thoo Lin,P., Moore,M.H. and Salisbury,S.A. (1998) A thymine-like base analogues forms wobble pairs with adenine in a Z-DNA duplex. J.Mol.Biol, 282, 1005-1011.
-
(1998)
J. Mol. Biol
, vol.282
, pp. 1005-1011
-
-
Schuerman, G.S.1
Van, L.2
Loakes, D.3
Brown, D.M.4
Kong Thoo Lin, P.5
Moore, M.H.6
Salisbury, S.A.7
-
31
-
-
0026321093
-
Molecular basis for methoxyamine initiated mutagenesis
-
Stone,M.J., Nedderman,A.N.R., Williams,D.H., Kong Thoo Lin,P. and Brown,D.M. (1991) Molecular basis for methoxyamine initiated mutagenesis. J. Mol. Biol., 222, 711-723.
-
(1991)
J. Mol. Biol.
, vol.222
, pp. 711-723
-
-
Stone, M.J.1
Nedderman, A.N.R.2
Williams, D.H.3
Kong Thoo Lin, P.4
Brown, D.M.5
-
32
-
-
0015498795
-
Tautomerism of nucleic acid bases I. Cytosine
-
Lee,G.C.Y., Prestegard,J.H. and Chan,S.I. (1972) Tautomerism of nucleic acid bases. I. Cytosine. J. Am. Chem. Soc., 94, 951-959.
-
(1972)
J. Am. Chem. Soc.
, vol.94
, pp. 951-959
-
-
Lee, G.C.Y.1
Prestegard, J.H.2
Chan, S.I.3
-
33
-
-
0022505062
-
Structure of an adenine-cytosine base pair in DNA and its implications for mismatch repair
-
Hunter,W.N., Brown,T., Anand,N.N. and Kennard,O. (1986) Structure of an adenine-cytosine base pair in DNA and its implications for mismatch repair. Nature, 320, 552-555.
-
(1986)
Nature
, vol.320
, pp. 552-555
-
-
Hunter, W.N.1
Brown, T.2
Anand, N.N.3
Kennard, O.4
-
34
-
-
0001475194
-
+ base pairs
-
+ base pairs. Biochemistry, 37, 11726-11731.
-
(1998)
Biochemistry
, vol.37
, pp. 11726-11731
-
-
Jang, S.B.1
Hung, L.W.2
Chi, Y.I.3
Holbrook, E.L.4
Carter, R.J.5
Holbrook, S.R.6
-
35
-
-
0025346833
-
Influence of pH on the conformation and stability of mismatch base-pairs in DNA
-
Brown,T., Leonard,G.A., Booth,E.D. and Kneale,G. (1990) Influence of pH on the conformation and stability of mismatch base-pairs in DNA. J. Mol. Biol., 212, 437-440.
-
(1990)
J. Mol. Biol.
, vol.212
, pp. 437-440
-
-
Brown, T.1
Leonard, G.A.2
Booth, E.D.3
Kneale, G.4
-
36
-
-
0024828309
-
The structure of DAPI bound to DNA
-
Larsen,T.A., Goodsell,D.S., Cascio,D., Grzeskowiak,K. and Dickerson,R.E. (1989) The structure of DAPI bound to DNA. J. Biomol. Struct. Dyn., 7, 477-491.
-
(1989)
J. Biomol. Struct. Dyn.
, vol.7
, pp. 477-491
-
-
Larsen, T.A.1
Goodsell, D.S.2
Cascio, D.3
Grzeskowiak, K.4
Dickerson, R.E.5
-
37
-
-
0033554872
-
Crystal structure of d(GGCCAATTGG) complexed with DAPI reveals novel binding mode
-
Vlieghe,D., Sponer,J. and Van Meervelt,L. (1999) Crystal structure of d(GGCCAATTGG) complexed with DAPI reveals novel binding mode. Biochemistry, 38, 16443-16451.
-
(1999)
Biochemistry
, vol.38
, pp. 16443-16451
-
-
Vlieghe, D.1
Sponer, J.2
Van Meervelt, L.3
-
38
-
-
0024296533
-
The molecular structure of the complex of Hoechst 33258 and the DNA dodecamer d(CGCGAATTCGCG)
-
Teng,M.K., Usman,N., Frederick,C.A. and Wang,A.H. (1988) The molecular structure of the complex of Hoechst 33258 and the DNA dodecamer d(CGCGAATTCGCG). Nucleic Acids Res., 16, 2671-2690.
-
(1988)
Nucleic Acids Res.
, vol.16
, pp. 2671-2690
-
-
Teng, M.K.1
Usman, N.2
Frederick, C.A.3
Wang, A.H.4
-
39
-
-
0025885778
-
Low-temperature crystallographic analysis of the binding of Hoechst 33258 to the double-helical DNA dodecamer C-G-CG-A-A-T-T-C-G-C-G
-
Quintana,J.R., Lipanov,A.A. and Dickerson,R.E. (1991) Low-temperature crystallographic analysis of the binding of Hoechst 33258 to the double-helical DNA dodecamer C-G-CG-A-A-T-T-C-G-C-G. Biochemistry, 30, 10294-10306.
-
(1991)
Biochemistry
, vol.30
, pp. 10294-10306
-
-
Quintana, J.R.1
Lipanov, A.A.2
Dickerson, R.E.3
-
40
-
-
0026569363
-
Conformation of B-DNA containing O6-ethyl-G-C base pairs stabilized by minor groove binding drugs: molecular structure of d(CGC[e6G]AATTCGCG) complexed with Hoechst 33258 or Hoechst 333
-
Sriram,M., van der Marel,G.A., Roelen,H.L., van Boom,J.H. and Wang,A.H. (1992) Conformation of B-DNA containing O6-ethyl-G-C base pairs stabilized by minor groove binding drugs: molecular structure of d(CGC[e6G]AATTCGCG) complexed with Hoechst 33258 or Hoechst 333 EMBO J., 11, 225-232.
-
(1992)
EMBO J.
, vol.11
, pp. 225-232
-
-
Sriram, M.1
van der Marel, G.A.2
Roelen, H.L.3
van Boom, J.H.4
Wang, A.H.5
-
42
-
-
0025110405
-
Molecular structure of the complex formed between the anticancer drug cisplatin and d(pGpG): C222(1) crystal form
-
Coll,M., Sherman,S.E., Gibson,D., Lippard,S.J. and Wang,A.H. (1990) Molecular structure of the complex formed between the anticancer drug cisplatin and d(pGpG): C222(1) crystal form. J. Biomol. Struct. Dyn., 8, 315-330.
-
(1990)
J. Biomol. Struct. Dyn.
, vol.8
, pp. 315-330
-
-
Coll, M.1
Sherman, S.E.2
Gibson, D.3
Lippard, S.J.4
Wang, A.H.5
-
43
-
-
84889120137
-
Improved methods for building protein models in electron density maps and the location of errors in these models
-
Jones,T.A., Zou,J.Y., Cowan,S.W. and Kjeldgaard,M. (1991) Improved methods for building protein models in electron density maps and the location of errors in these models. Acta Crystallogr, A47, 110-111.
-
(1991)
Acta Crystallogr
, vol.A47
, pp. 110-111
-
-
Jones, T.A.1
Zou, J.Y.2
Cowan, S.W.3
Kjeldgaard, M.4
|