-
1
-
-
10044228602
-
Photolyase and cryptochrome blue-light photoreceptors
-
Sancar A (2004) Photolyase and cryptochrome blue-light photoreceptors. Adv Protein Chem 69: 73-100.
-
(2004)
Adv Protein Chem
, vol.69
, pp. 73-100
-
-
Sancar, A.1
-
2
-
-
32344444896
-
Photolyases and cryptochromes: Common mechanisms of DNA repair and light-driven signaling?
-
Essen LO (2006) Photolyases and cryptochromes: common mechanisms of DNA repair and light-driven signaling? Curr Opin Struct Biol 16: 51-59.
-
(2006)
Curr Opin Struct Biol
, vol.16
, pp. 51-59
-
-
Essen, L.O.1
-
3
-
-
0027349267
-
Temporal organization: Reflections of a Darwinian clockwatcher
-
Pittendrigh CS (1993) Temporal organization: reflections of a Darwinian clockwatcher. Annu Rev Physiol 55: 16-54.
-
(1993)
Annu Rev Physiol
, vol.55
, pp. 16-54
-
-
Pittendrigh, C.S.1
-
4
-
-
0348011476
-
The coevolution of blue-light photoreception and circadian rhythms
-
Gehring W, Rosbash M (2003) The coevolution of blue-light photoreception and circadian rhythms. J Mol Evol 57: S286-289.
-
(2003)
J Mol Evol
, vol.57
-
-
Gehring, W.1
Rosbash, M.2
-
5
-
-
62449268975
-
Circadian oscillation of nucleotide excision repair in mammalian brain
-
Kang TH, Reardon JT, Kemp M, Sancar A (2009) Circadian oscillation of nucleotide excision repair in mammalian brain. Proc Natl Acad Sci USA 106: 2864-2867.
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 2864-2867
-
-
Kang, T.H.1
Reardon, J.T.2
Kemp, M.3
Sancar, A.4
-
6
-
-
37549030498
-
A conserved DNA damage response pathway responsible for coupling the cell division cycle to the circadian and metabolic cycles
-
Chen Z, McKnight SL (2007) A conserved DNA damage response pathway responsible for coupling the cell division cycle to the circadian and metabolic cycles. Cell Cycle 6: 2906-2912.
-
(2007)
Cell Cycle
, vol.6
, pp. 2906-2912
-
-
Chen, Z.1
McKnight, S.L.2
-
7
-
-
0034594904
-
Light acts directly on organs and cells in culture to set the vertebrate circadian clock
-
Whitmore D, Foulkes NS, Sassone-Corsi P (2000) Light acts directly on organs and cells in culture to set the vertebrate circadian clock. Nature 404: 87-91.
-
(2000)
Nature
, vol.404
, pp. 87-91
-
-
Whitmore, D.1
Foulkes, N.S.2
Sassone-Corsi, P.3
-
8
-
-
14744291081
-
Imaging of single light-responsive clock cells reveals fluctuating free-running periods
-
Carr AJ, Whitmore D (2005) Imaging of single light-responsive clock cells reveals fluctuating free-running periods. Nat Cell Biol 7: 319-321.
-
(2005)
Nat Cell Biol
, vol.7
, pp. 319-321
-
-
Carr, A.J.1
Whitmore, D.2
-
9
-
-
0033822171
-
Circadian rhythm genetics: From flies to mice to humans
-
Wager-Smith K, Kay SA (2000) Circadian rhythm genetics: From flies to mice to humans. Nat Genet 26: 23-27.
-
(2000)
Nat Genet
, vol.26
, pp. 23-27
-
-
Wager-Smith, K.1
Kay, S.A.2
-
10
-
-
0037076218
-
Light induction of a vertebrate clock gene involves signaling through blue-light receptors and MAP kinases
-
Cermakian N, Pando MP, Thompson CL, Pinchak AB, Selby CP, et al. (2002) Light induction of a vertebrate clock gene involves signaling through blue-light receptors and MAP kinases. Curr Biol 12: 844-848.
-
(2002)
Curr Biol
, vol.12
, pp. 844-848
-
-
Cermakian, N.1
Pando, M.P.2
Thompson, C.L.3
Pinchak, A.B.4
Selby, C.P.5
-
11
-
-
69749106655
-
Common light signaling pathways controlling DNA repair and circadian clock entrainment in zebrafish
-
Hirayama J, Miyamura N, Uchida Y, Asaoka Y, Honda R, et al. (2009) Common light signaling pathways controlling DNA repair and circadian clock entrainment in zebrafish. Cell Cycle 8: 2794-801.
-
(2009)
Cell Cycle
, vol.8
, pp. 2794-2801
-
-
Hirayama, J.1
Miyamura, N.2
Uchida, Y.3
Asaoka, Y.4
Honda, R.5
-
12
-
-
22544475560
-
Common pathways in circadian and cell cycle clocks: Light-dependent activation of Fos/AP-1 in zebrafish controls CRY-1a and WEE-1
-
Hirayama J, Cardone L, Doi M, Sassone-Corsi P (2005) Common pathways in circadian and cell cycle clocks: light-dependent activation of Fos/AP-1 in zebrafish controls CRY-1a and WEE-1. Proc Natl Acad Sci U S A 102: 10194-10199.
-
(2005)
Proc Natl Acad Sci U S A
, vol.102
, pp. 10194-10199
-
-
Hirayama, J.1
Cardone, L.2
Doi, M.3
Sassone-Corsi, P.4
-
13
-
-
0029808748
-
Transcription factor AP-1 regulation by mitogen-activated protein kinase signal transduction pathways
-
Whitmarsh AJ, Davis RJ (1996) Transcription factor AP-1 regulation by mitogen-activated protein kinase signal transduction pathways. J Mol Med 10: 589-607.
-
(1996)
J Mol Med
, vol.10
, pp. 589-607
-
-
Whitmarsh, A.J.1
Davis, R.J.2
-
14
-
-
38649085332
-
Identification of novel light-induced genes in the suprachiasmatic nucleus
-
Porterfield VM, Piontkivska H, Mintz, EM (2007) Identification of novel light-induced genes in the suprachiasmatic nucleus. BMC Neurosci 8: 98-107.
-
(2007)
BMC Neurosci
, vol.8
, pp. 98-107
-
-
Porterfield, V.M.1
Piontkivska, H.2
Mintz, E.M.3
-
15
-
-
33745329809
-
The circadian PAR-domain basic leucine zipper transcription factors DBP, TEF, and HLF modulate basal and inducible xenobiotic detoxification
-
Gachon F, Olela FF, Schaad O, Descombes P, Schibler U (2006) The circadian PAR-domain basic leucine zipper transcription factors DBP, TEF, and HLF modulate basal and inducible xenobiotic detoxification. Cell Metab 4: 25-36.
-
(2006)
Cell Metab
, vol.4
, pp. 25-36
-
-
Gachon, F.1
Olela, F.F.2
Schaad, O.3
Descombes, P.4
Schibler, U.5
-
16
-
-
0028909574
-
DNA-binding specificity of the PAR basic leucine zipper protein VBP partially overlaps those of the C/ EBP and CREB/ATF families and is influenced by domains that flank the core basic region
-
Haas NB, Cantwell CA, Johnson PF, Burch JB (1995) DNA-binding specificity of the PAR basic leucine zipper protein VBP partially overlaps those of the C/ EBP and CREB/ATF families and is influenced by domains that flank the core basic region. Mol Cell Biol 15: 1923-1932.
-
(1995)
Mol Cell Biol
, vol.15
, pp. 1923-1932
-
-
Haas, N.B.1
Cantwell, C.A.2
Johnson, P.F.3
Burch, J.B.4
-
18
-
-
54349097684
-
Autonomous onset of the circadian clock in the zebrafish embryo
-
Dekens MPS, Whitmore D (2008) Autonomous onset of the circadian clock in the zebrafish embryo. EMBO J 27: 2757-2765.
-
(2008)
EMBO J
, vol.27
, pp. 2757-2765
-
-
Dekens, M.P.S.1
Whitmore, D.2
-
19
-
-
21244477916
-
Circadian profiling of the transcriptome in immortalized rat SCN cells
-
Menger GJ, Lu K, Thomas T, Cassone VM, Earnest DJ (2005) Circadian profiling of the transcriptome in immortalized rat SCN cells. Physiol Genomics 21: 370-381.
-
(2005)
Physiol Genomics
, vol.21
, pp. 370-381
-
-
Menger, G.J.1
Lu, K.2
Thomas, T.3
Cassone, V.M.4
Earnest, D.J.5
-
20
-
-
0029914630
-
Similarity among the Drosophila (6-4)photolyase, a human photolyase homolog, and the DNA photolyase-blue-light photoreceptor family
-
Todo T, Ryo H, Yamamoto K, Toh H, Inui T, et al. (1996) Similarity among the Drosophila (6-4)photolyase, a human photolyase homolog, and the DNA photolyase-blue-light photoreceptor family. Science 272: 109-112.
-
(1996)
Science
, vol.272
, pp. 109-112
-
-
Todo, T.1
Ryo, H.2
Yamamoto, K.3
Toh, H.4
Inui, T.5
-
21
-
-
0032553599
-
Role of mouse cryptochrome blue-light photoreceptor in circadian photo-responses
-
Thresher RJ, Vitaterna MH, Miyamoto Y, Kazantsev A, Hsu DS, et al. (1998) Role of mouse cryptochrome blue-light photoreceptor in circadian photo-responses. Science 282: 1490-1494.
-
(1998)
Science
, vol.282
, pp. 1490-1494
-
-
Thresher, R.J.1
Vitaterna, M.H.2
Miyamoto, Y.3
Kazantsev, A.4
Hsu, D.S.5
-
22
-
-
0033834420
-
Molecular analysis of zebrafish photolyase/cryptochrome family: Two types of cryptochromes present in zebrafish
-
Kobayashi Y, Ishikawa T, Hirayama J, Daiyasu H, Kanai S, et al. (2000) Molecular analysis of zebrafish photolyase/cryptochrome family: two types of cryptochromes present in zebrafish. Genes Cells 5: 725-738.
-
(2000)
Genes Cells
, vol.5
, pp. 725-738
-
-
Kobayashi, Y.1
Ishikawa, T.2
Hirayama, J.3
Daiyasu, H.4
Kanai, S.5
-
24
-
-
35648973259
-
Circadian control by the reduction/ oxidation pathway: Catalase represses light-dependent clock gene expression in the zebrafish
-
Hirayama J, Cho S, Sassone-Corsi P (2007) Circadian control by the reduction/ oxidation pathway: catalase represses light-dependent clock gene expression in the zebrafish. Proc Natl Acad Sci USA 104: 15747-15752.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 15747-15752
-
-
Hirayama, J.1
Cho, S.2
Sassone-Corsi, P.3
-
25
-
-
33750509178
-
CUL4-DDB1 ubiquitin ligase interacts with multiple WD40-repeat proteins and regulates histone methylation
-
Higa LA, Wu M, Ye T, Kobayashi R, Sun H, Zhang H (2006) CUL4-DDB1 ubiquitin ligase interacts with multiple WD40-repeat proteins and regulates histone methylation. Nat Cell Biol 8: 1277-1283.
-
(2006)
Nat Cell Biol
, vol.8
, pp. 1277-1283
-
-
Higa, L.A.1
Wu, M.2
Ye, T.3
Kobayashi, R.4
Sun, H.5
Zhang, H.6
-
26
-
-
0035985177
-
Identification of genes periodically expressed in the human cell cycle and their expression in tumors
-
Whitfield ML, Sherlock G, Saldanha AJ, Murray JI, Ball CA, et al. (2002) Identification of genes periodically expressed in the human cell cycle and their expression in tumors. Mol Biol Cell 13: 1977-2000.
-
(2002)
Mol Biol Cell
, vol.13
, pp. 1977-2000
-
-
Whitfield, M.L.1
Sherlock, G.2
Saldanha, A.J.3
Murray, J.I.4
Ball, C.A.5
-
27
-
-
0344232726
-
Light regulates the cell cycle in zebrafish
-
Dekens MPS, Santoriello C, Vallone D, Grassi G, Whitmore D, et al. (2003) Light regulates the cell cycle in zebrafish. Curr Biol 13: 2051-2057.
-
(2003)
Curr Biol
, vol.13
, pp. 2051-2057
-
-
Dekens, M.P.S.1
Santoriello, C.2
Vallone, D.3
Grassi, G.4
Whitmore, D.5
-
28
-
-
0037125133
-
A novel human DNA glycosylase that removes oxidative DNA damage and is homologous to Escherichia coli endonuclease VIII
-
Bandaru V, Sunkara S, Wallace SS, Bond JP (2002) A novel human DNA glycosylase that removes oxidative DNA damage and is homologous to Escherichia coli endonuclease VIII. DNA Repair 1: 517-529.
-
(2002)
DNA Repair
, vol.1
, pp. 517-529
-
-
Bandaru, V.1
Sunkara, S.2
Wallace, S.S.3
Bond, J.P.4
-
29
-
-
28244480266
-
Purification, cDNA cloning, and expression profiles of the cyclobutane pyrimidine dimer photolyase of Xenopus laevis
-
Tanida H, Tahara E, Mochizuki M, Yamane Y, Ryoji M (2005) Purification, cDNA cloning, and expression profiles of the cyclobutane pyrimidine dimer photolyase of Xenopus laevis. FEBS J 272: 6098-6108.
-
(2005)
FEBS J
, vol.272
, pp. 6098-6108
-
-
Tanida, H.1
Tahara, E.2
Mochizuki, M.3
Yamane, Y.4
Ryoji, M.5
-
30
-
-
0037082129
-
Peptide methionine sulfoxide reductase: Structure, mechanism of action, and biological function
-
Weissbach H, Etienne F, Hoshi T, Heinemann SH, Lowther WT, et al. (2002) Peptide methionine sulfoxide reductase: structure, mechanism of action, and biological function. Arch Biochem Biophys 397: 172-178.
-
(2002)
Arch Biochem Biophys
, vol.397
, pp. 172-178
-
-
Weissbach, H.1
Etienne, F.2
Hoshi, T.3
Heinemann, S.H.4
Lowther, W.T.5
-
31
-
-
33947381788
-
Redox in redux: Emergent roles for glutathione S-transferase P (GSTP) in regulation of cell signaling and S-glutathionylation
-
Tew KD (2007) Redox in redux: Emergent roles for glutathione S-transferase P (GSTP) in regulation of cell signaling and S-glutathionylation. Biochem Pharmacol 73: 1257-1269.
-
(2007)
Biochem Pharmacol
, vol.73
, pp. 1257-1269
-
-
Tew, K.D.1
-
32
-
-
0029915241
-
Involvement of peripheral benzodiazepine receptors in the protection of hematopoietic cells against oxygen radical damage
-
Carayon P, Portier M, Dussossoy D, Bord A, Petitprêtre G, et al. (1996) Involvement of peripheral benzodiazepine receptors in the protection of hematopoietic cells against oxygen radical damage. Blood 87: 3170-3178.
-
(1996)
Blood
, vol.87
, pp. 3170-3178
-
-
Carayon, P.1
Portier, M.2
Dussossoy, D.3
Bord, A.4
Petitprêtre, G.5
-
33
-
-
23044479387
-
Characterization of hypoxia induced gene 1: Expression during rat central nervous system maturation and evidence of antisense RNA expression
-
Bedo G, Vargas M, Ferreiro MJ, Chalar C, Agrati D (2005) Characterization of hypoxia induced gene 1: expression during rat central nervous system maturation and evidence of antisense RNA expression. Int J Dev Biol 49: 431-436.
-
(2005)
Int J Dev Biol
, vol.49
, pp. 431-436
-
-
Bedo, G.1
Vargas, M.2
Ferreiro, M.J.3
Chalar, C.4
Agrati, D.5
-
35
-
-
0038618920
-
Differential regulation of Period 2 and Period 3 expression during development of the zebrafish circadian clock
-
Delaunay F, Thisse C, Thisse B, Laudet V (2003) Differential regulation of Period 2 and Period 3 expression during development of the zebrafish circadian clock. Gene Expr Patterns 3: 319-324.
-
(2003)
Gene Expr Patterns
, vol.3
, pp. 319-324
-
-
Delaunay, F.1
Thisse, C.2
Thisse, B.3
Laudet, V.4
-
36
-
-
19044392845
-
Functional development of the zebrafish pineal gland: Light-induced expression of period2 is required for onset of the circadian clock
-
Ziv L, Levkovitz S, Toyama R, Falcon J, Gothilf Y (2005) Functional development of the zebrafish pineal gland: light-induced expression of period2 is required for onset of the circadian clock. J Neuroendocrinol 17: 314-320.
-
(2005)
J Neuroendocrinol
, vol.17
, pp. 314-320
-
-
Ziv, L.1
Levkovitz, S.2
Toyama, R.3
Falcon, J.4
Gothilf, Y.5
-
37
-
-
34249713720
-
MicroRNA modulation of circadian-clock period and entrainment
-
Cheng HY, Papp JW, Varlamova O, Dziema H, Russell B, et al. (2007) MicroRNA modulation of circadian-clock period and entrainment. Neuron 54: 813-829.
-
(2007)
Neuron
, vol.54
, pp. 813-829
-
-
Cheng, H.Y.1
Papp, J.W.2
Varlamova, O.3
Dziema, H.4
Russell, B.5
-
38
-
-
0030045791
-
The Two PAR Leucine Zipper Proteins, TEF and DBP, Display Similar Circadian and Tissue-specific expression, but have different target promoter preferences
-
Fonjallaz P, Ossipow V, Wanner G, Schibler U (1996) The two PAR leucine zipper proteins, TEF and DBP, display similar circadian and tissue-specific expression, but have different target promoter preferences. EMBO J 15: 351-362.
-
(1996)
EMBO J
, vol.15
, pp. 351-362
-
-
Fonjallaz, P.1
Ossipow, V.2
Wanner, G.3
Schibler, U.4
-
39
-
-
0037178787
-
The orphan nuclear receptor REV-ERBalpha controls circadian transcription within the positive limb of the mammalian circadian oscillator
-
Preitner N, Damiola F, Lopez-Molina L, Zakany J, Duboule D, et al. (2002) The orphan nuclear receptor REV-ERBalpha controls circadian transcription within the positive limb of the mammalian circadian oscillator. Cell 110: 251-260.
-
(2002)
Cell
, vol.110
, pp. 251-260
-
-
Preitner, N.1
Damiola, F.2
Lopez-Molina, L.3
Zakany, J.4
Duboule, D.5
-
40
-
-
0032491907
-
Cloning and characterization of two isoforms of the zebrafish thyrotroph embryonic factor (tef alpha and tef beta)
-
Xu X, Liu L, Wong KC, Ge R (1998) Cloning and characterization of two isoforms of the zebrafish thyrotroph embryonic factor (tef alpha and tef beta). Biochim Biophys Acta 1395: 13-20.
-
(1998)
Biochim Biophys Acta
, vol.1395
, pp. 13-20
-
-
Xu, X.1
Liu, L.2
Wong, K.C.3
Ge, R.4
-
41
-
-
70350518303
-
Light directs zebrafish period2 expression via conserved D and
-
Vatine G, Vallone D, Appelbaum L, Mracek P, Ben-Moshe Z, et al. (2009) Light directs zebrafish period2 expression via conserved D and E boxes. PLoS Biol 7: e1000223.
-
(2009)
E Boxes. PLoS Biol
, vol.7
-
-
Vatine, G.1
Vallone, D.2
Appelbaum, L.3
Mracek, P.4
Ben-Moshe, Z.5
-
42
-
-
0029089791
-
The rat hepatic leukemia factor (HLF) gene encodes two transcriptional activators with distinct circadian rhythms, tissue distributions and target preferences
-
Falvey E, Fleury-Olela F, Schibler U (1995) The rat hepatic leukemia factor (HLF) gene encodes two transcriptional activators with distinct circadian rhythms, tissue distributions and target preferences. EMBO J 14: 4307-4317.
-
(1995)
EMBO J
, vol.14
, pp. 4307-4317
-
-
Falvey, E.1
Fleury-Olela, F.2
Schibler, U.3
-
43
-
-
2942679506
-
The loss of circadian PAR bZip transcription factors results in epilepsy
-
Gachon F, Fonjallaz P, Damiola F, Gos P, Kodama T, et al. (2004) The loss of circadian PAR bZip transcription factors results in epilepsy. Genes Dev 18: 1397-1412.
-
(2004)
Genes Dev
, vol.18
, pp. 1397-1412
-
-
Gachon, F.1
Fonjallaz, P.2
Damiola, F.3
Gos, P.4
Kodama, T.5
-
44
-
-
0026091281
-
TEF, a transcription factor expressed specifically in the anterior pituitary during embryogenesis, defines a new class of leucine zipper proteins
-
Drolet DW, Scully KM, Simmons DM, Wegner M, Chu KT, et al. (1991) TEF, a transcription factor expressed specifically in the anterior pituitary during embryogenesis, defines a new class of leucine zipper proteins. Genes Dev 5: 1739-1753.
-
(1991)
Genes Dev
, vol.5
, pp. 1739-1753
-
-
Drolet, D.W.1
Scully, K.M.2
Simmons, D.M.3
Wegner, M.4
Chu, K.T.5
-
45
-
-
0036786776
-
Zebrafish CRY represses transcription mediated by CLOCK-BMAL heterodimer without inhibiting its binding to DNA
-
Ishikawa T, Hirayama J, Kobayashi Y, Todo T (2002) Zebrafish CRY represses transcription mediated by CLOCK-BMAL heterodimer without inhibiting its binding to DNA. Genes Cells 7: 1073-1086.
-
(2002)
Genes Cells
, vol.7
, pp. 1073-1086
-
-
Ishikawa, T.1
Hirayama, J.2
Kobayashi, Y.3
Todo, T.4
-
46
-
-
0028387996
-
Large-scale mutagenesis in the zebrafish: In search of genes controlling development in a vertebrate
-
Mullins MC, Hammerschmidt M, Haffter P, Nusslein-Volhard C. (1994) Large-scale mutagenesis in the zebrafish: in search of genes controlling development in a vertebrate. Curr Biol 4: 189-202.
-
(1994)
Curr Biol
, vol.4
, pp. 189-202
-
-
Mullins, M.C.1
Hammerschmidt, M.2
Haffter, P.3
Nusslein-Volhard, C.4
-
47
-
-
0036581160
-
Relative expression software tool (REST) for group-wise comparison and statistical analysis of relative expression results in real-time PCR
-
Pfaffl MW, Horgan GW, Dempfle L (2002) Relative expression software tool (REST) for group-wise comparison and statistical analysis of relative expression results in real-time PCR. Nucleic Acids Res 30: e36.
-
(2002)
Nucleic Acids Res
, vol.30
-
-
Pfaffl, M.W.1
Horgan, G.W.2
Dempfle, L.3
-
48
-
-
0033780376
-
Effective targeted gene 'knockdown' in zebrafish
-
Nasevicius A, Ekker SC (2000) Effective targeted gene 'knockdown' in zebrafish. Nat Genet 26: 216-220.
-
(2000)
Nat Genet
, vol.26
, pp. 216-220
-
-
Nasevicius, A.1
Ekker, S.C.2
|