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Volumn 32, Issue 11, 2010, Pages 1725-1731

Isolation and characterization of the gene encoding the chloroplast-type ferredoxin component of carbazole 1,9a-dioxygenase from a putative Kordiimonas sp

Author keywords

Car gene cluster; Carbazole; Carbazole 1,9a dioxygenase; Chloroplast type ferredoxin

Indexed keywords

AMINO ACID SEQUENCE; CARBAZOLE; CARDO SYSTEMS; CHLOROPLAST-TYPE FERREDOXIN; CONSENSUS SEQUENCE; DIOXYGENASES; ESCHERICHIA COLI JM109; FLUORENES; GENE CLUSTERS; IRON-SULFUR PROTEINS; ISOLATION AND CHARACTERIZATION; TRANSFORMATION RATIO;

EID: 77957937649     PISSN: 01415492     EISSN: 15736776     Source Type: Journal    
DOI: 10.1007/s10529-010-0358-x     Document Type: Article
Times cited : (11)

References (24)
  • 1
    • 0014398462 scopus 로고
    • Molecular geometry and carcinogenic activity of aromatic compounds. New perspectives
    • Arcos JC, Argus MF (1968) Molecular geometry and carcinogenic activity of aromatic compounds. New perspectives. Adv Cancer Res 11: 305-471.
    • (1968) Adv Cancer Res , vol.11 , pp. 305-471
    • Arcos, J.C.1    Argus, M.F.2
  • 2
    • 0002557598 scopus 로고
    • Phthalate dioxygenase reductase and related flavin-iron-sulfur containing electron transferases
    • F. Muller (Ed.), Boca Raton, FL: CRC Press
    • Batie CJ, Ballou DP, Correll CC (1991) Phthalate dioxygenase reductase and related flavin-iron-sulfur containing electron transferases. In: Muller F (ed) Chemistry and biochemistry of flavoenzymes, vol 3. CRC Press, Boca Raton, FL, pp 543-556.
    • (1991) Chemistry and Biochemistry of Flavoenzymes , vol.3 , pp. 543-556
    • Batie, C.J.1    Ballou, D.P.2    Correll, C.C.3
  • 3
    • 0028233145 scopus 로고
    • Evidence for a novel pathway in the degradation of fluorine by Pseudomonas sp. strain F274
    • Grifoll M, Selifonov SA, Chapman PJ (1994) Evidence for a novel pathway in the degradation of fluorine by Pseudomonas sp. strain F274. Appl Environ Microbiol 60: 2438-2449.
    • (1994) Appl Environ Microbiol , vol.60 , pp. 2438-2449
    • Grifoll, M.1    Selifonov, S.A.2    Chapman, P.J.3
  • 4
    • 0037150032 scopus 로고    scopus 로고
    • Sphingomonas sp. strain KA1, carrying a carbazole dioxygenase gene homologue, degrades chlorinated dibenzo-p-dioxins in soil
    • Habe H, Ashikawa Y, Saiki Y, Yoshida T, Nojiri H, Omori T (2002) Sphingomonas sp. strain KA1, carrying a carbazole dioxygenase gene homologue, degrades chlorinated dibenzo-p-dioxins in soil. FEMS Microbiol Lett 211: 43-49.
    • (2002) FEMS Microbiol Lett , vol.211 , pp. 43-49
    • Habe, H.1    Ashikawa, Y.2    Saiki, Y.3    Yoshida, T.4    Nojiri, H.5    Omori, T.6
  • 5
    • 0025905579 scopus 로고
    • A new family of bacterial regulatory proteins
    • Haydon DJ, Guest JR (1991) A new family of bacterial regulatory proteins. FEMS Microbiol Lett 63: 291-295.
    • (1991) FEMS Microbiol Lett , vol.63 , pp. 291-295
    • Haydon, D.J.1    Guest, J.R.2
  • 7
    • 15744395874 scopus 로고    scopus 로고
    • Diversity of carbazole-degrading bacteria having the car gene cluster: isolation of a novel Gram-positive carbazole-degrading bacterium
    • Inoue K, Habe H, Yamane H, Omori T, Nojiri H (2005) Diversity of carbazole-degrading bacteria having the car gene cluster: isolation of a novel Gram-positive carbazole-degrading bacterium. FEMS Microbiol Lett 245: 145-153.
    • (2005) FEMS Microbiol Lett , vol.245 , pp. 145-153
    • Inoue, K.1    Habe, H.2    Yamane, H.3    Omori, T.4    Nojiri, H.5
  • 8
    • 33646561203 scopus 로고    scopus 로고
    • Characterization of novel carbazole catabolism genes from Gram-positive carbazole degrader Nocardioides aromaticivorans IC177
    • Inoue K, Habe H, Ymane H, Nojiri H (2006) Characterization of novel carbazole catabolism genes from Gram-positive carbazole degrader Nocardioides aromaticivorans IC177. Appl Environ Microbiol 72: 3321-3329.
    • (2006) Appl Environ Microbiol , vol.72 , pp. 3321-3329
    • Inoue, K.1    Habe, H.2    Ymane, H.3    Nojiri, H.4
  • 9
    • 68949212842 scopus 로고    scopus 로고
    • Specific interactions between the ferredoxin and terminal oxygenase components of a class IIB Rieske nonheme iron oxygenase, carbazole 1,9a-dioxygenase
    • Inoue K, Ashikawa Y, Umeda T, Abo M, Katsuki J, Usami Y, Noguchi H, Fujimoto Z, Terada T, Yamane H, Nojiri H (2009) Specific interactions between the ferredoxin and terminal oxygenase components of a class IIB Rieske nonheme iron oxygenase, carbazole 1, 9a-dioxygenase. J Mol Biol 392: 436-451.
    • (2009) J Mol Biol , vol.392 , pp. 436-451
    • Inoue, K.1    Ashikawa, Y.2    Umeda, T.3    Abo, M.4    Katsuki, J.5    Usami, Y.6    Noguchi, H.7    Fujimoto, Z.8    Terada, T.9    Yamane, H.10    Nojiri, H.11
  • 10
    • 0031284266 scopus 로고    scopus 로고
    • Cloning and characterization of the genes involved in the degradation of dibenzofuran by Terrabacter sp. strain DBF63
    • Kasuga K, Nojiri H, Yamane H, Kodama T, Omori T (1997) Cloning and characterization of the genes involved in the degradation of dibenzofuran by Terrabacter sp. strain DBF63. J Bacteriol 84: 387-399.
    • (1997) J Bacteriol , vol.84 , pp. 387-399
    • Kasuga, K.1    Nojiri, H.2    Yamane, H.3    Kodama, T.4    Omori, T.5
  • 12
    • 67651166633 scopus 로고    scopus 로고
    • Isolation and characterization of a car gene cluster from the naphthalene, phenanthrene, and carbazole-degrading marine isolate Lysobacter sp. strain OC7
    • Maeda R, Nagashima H, Zulkharnain AB, Iwata K, Omori T (2009b) Isolation and characterization of a car gene cluster from the naphthalene, phenanthrene, and carbazole-degrading marine isolate Lysobacter sp. strain OC7. Curr Microbiol 59: 154-159.
    • (2009) Curr Microbiol , vol.59 , pp. 154-159
    • Maeda, R.1    Nagashima, H.2    Zulkharnain, A.B.3    Iwata, K.4    Omori, T.5
  • 13
    • 0026743341 scopus 로고
    • The electron-transport proteins of hydroxylating bacterial dioxygenases
    • Mason JR, Cammack R (1992) The electron-transport proteins of hydroxylating bacterial dioxygenases. Annu Rev Microbiol 46: 277-305.
    • (1992) Annu Rev Microbiol , vol.46 , pp. 277-305
    • Mason, J.R.1    Cammack, R.2
  • 14
    • 77953649933 scopus 로고    scopus 로고
    • Cloning and nucleotide sequences of carbazole degradation genes from marine bacterium Neptuniibacter sp. strain CAR-SF
    • Nagashima H, Zulkharnain AB, Maeda R, Fuse H, Iwata K, Omori T (2010) Cloning and nucleotide sequences of carbazole degradation genes from marine bacterium Neptuniibacter sp. strain CAR-SF. Curr Microbiol 61: 50-56.
    • (2010) Curr Microbiol , vol.61 , pp. 50-56
    • Nagashima, H.1    Zulkharnain, A.B.2    Maeda, R.3    Fuse, H.4    Iwata, K.5    Omori, T.6
  • 17
    • 0024726277 scopus 로고
    • Examination of protein sequence homologies: homologies. 5. New perspectives on evolution between bacterial and chloroplast-type ferredoxins inferred from sequence evidence
    • Otaka E, Ooi T (1989) Examination of protein sequence homologies: homologies. 5. New perspectives on evolution between bacterial and chloroplast-type ferredoxins inferred from sequence evidence. J Mol Evol 29: 246-254.
    • (1989) J Mol Evol , vol.29 , pp. 246-254
    • Otaka, E.1    Ooi, T.2
  • 20
    • 0030744612 scopus 로고    scopus 로고
    • Identification and characterization of genes encoding carbazole 1,9a-dioxygenase in Pseudomonas sp. strain CA10
    • Sato S, Nam J-W, Kasuga K, Nojiri H, Yamane H, Omori T (1997) Identification and characterization of genes encoding carbazole 1, 9a-dioxygenase in Pseudomonas sp. strain CA10. J Bacteriol 179: 4850-4858.
    • (1997) J Bacteriol , vol.179 , pp. 4850-4858
    • Sato, S.1    Nam, J.-W.2    Kasuga, K.3    Nojiri, H.4    Yamane, H.5    Omori, T.6
  • 21
    • 0016610995 scopus 로고
    • Determination of cistron specificity in bacteria ribosomes
    • Shine J, Dalgano L (1975) Determination of cistron specificity in bacteria ribosomes. Nature 254: 34-38.
    • (1975) Nature , vol.254 , pp. 34-38
    • Shine, J.1    Dalgano, L.2
  • 22
    • 0036950947 scopus 로고    scopus 로고
    • Detailed comparison between the substrate specificities of two angular dioxygenases, dibenzofuran 4,4a-dioxygenase from Terrabacter sp. and carbazole 1,9a-dioxygenase from Pseudomonas resinovorans
    • Takagi T, Nojiri H, Yoshida T, Habe H, Omori T (2002) Detailed comparison between the substrate specificities of two angular dioxygenases, dibenzofuran 4, 4a-dioxygenase from Terrabacter sp. and carbazole 1, 9a-dioxygenase from Pseudomonas resinovorans. Biotechnol Lett 24: 2099-2106.
    • (2002) Biotechnol Lett , vol.24 , pp. 2099-2106
    • Takagi, T.1    Nojiri, H.2    Yoshida, T.3    Habe, H.4    Omori, T.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.