메뉴 건너뛰기




Volumn 5, Issue , 2010, Pages

The calculation of information and organismal complexity

Author keywords

[No Author keywords available]

Indexed keywords

ANIMAL; ARTICLE; BIOLOGY; CLASSIFICATION; GENETICS; GENOME; HUMAN; MOLECULAR EVOLUTION;

EID: 77957730193     PISSN: None     EISSN: 17456150     Source Type: Journal    
DOI: 10.1186/1745-6150-5-59     Document Type: Article
Times cited : (15)

References (49)
  • 1
    • 59449090539 scopus 로고    scopus 로고
    • The problem of the eukaryotic genome size
    • Patrushev LI, Minkevich IG. The problem of the eukaryotic genome size. Biochem. (Moscow) 2008, 73:1519-1552.
    • (2008) Biochem. (Moscow) , vol.73 , pp. 1519-1552
    • Patrushev, L.I.1    Minkevich, I.G.2
  • 2
    • 7244245762 scopus 로고    scopus 로고
    • Finishing the euchromatic sequence of the human genome
    • 10.1038/nature03001, 15496913, International Human Genome Sequencing Consortium
    • International Human Genome Sequencing Consortium Finishing the euchromatic sequence of the human genome. Nature 2004, 431:931-945. 10.1038/nature03001, 15496913, International Human Genome Sequencing Consortium.
    • (2004) Nature , vol.431 , pp. 931-945
  • 3
    • 4243088097 scopus 로고    scopus 로고
    • The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics
    • Stein LD, Bao Z, Blasiar D, et al. The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics. PLoS Biol 2003, 1:166-192.
    • (2003) PLoS Biol , vol.1 , pp. 166-192
    • Stein, L.D.1    Bao, Z.2    Blasiar, D.3
  • 4
    • 0037023384 scopus 로고    scopus 로고
    • A draft sequence of the rice genome (Oryza sativa L. ssp. indica)
    • 10.1126/science.1068037, 11935017
    • Yu J, Hu S, Wang J, et al. A draft sequence of the rice genome (Oryza sativa L. ssp. indica). Science 2002, 296:79-92. 10.1126/science.1068037, 11935017.
    • (2002) Science , vol.296 , pp. 79-92
    • Yu, J.1    Hu, S.2    Wang, J.3
  • 5
    • 4344685561 scopus 로고    scopus 로고
    • A non-adaptationist perspective on evolution of genomic complexity or the continued dethroning of man
    • Koonin EV. A non-adaptationist perspective on evolution of genomic complexity or the continued dethroning of man. Cell Cycle 2004, 3:280-285.
    • (2004) Cell Cycle , vol.3 , pp. 280-285
    • Koonin, E.V.1
  • 6
    • 0034661690 scopus 로고    scopus 로고
    • Evolution of biology information
    • 10.1093/nar/28.14.2794, 102656, 10908337
    • Schneider TD. Evolution of biology information. Nucleic Acids research 2000, 28:2794-2799. 10.1093/nar/28.14.2794, 102656, 10908337.
    • (2000) Nucleic Acids research , vol.28 , pp. 2794-2799
    • Schneider, T.D.1
  • 7
    • 0036905397 scopus 로고    scopus 로고
    • What is complexity?
    • 10.1002/bies.10192, 12447974
    • Adami C. What is complexity?. BioEssays 2002, 24:1085-1094. 10.1002/bies.10192, 12447974.
    • (2002) BioEssays , vol.24 , pp. 1085-1094
    • Adami, C.1
  • 8
    • 0034712858 scopus 로고    scopus 로고
    • Evolution of biological complexity
    • 10.1073/pnas.97.9.4463, 18257, 10781045
    • Adami C, Ofria C, Collier TC. Evolution of biological complexity. Proc Natl Acad Sci 2000, 97:4463-4468. 10.1073/pnas.97.9.4463, 18257, 10781045.
    • (2000) Proc Natl Acad Sci , vol.97 , pp. 4463-4468
    • Adami, C.1    Ofria, C.2    Collier, T.C.3
  • 9
    • 33646876182 scopus 로고    scopus 로고
    • Average gene length is highly conserved on proaryotes and eukaryotes and diverges between the two kingdoms
    • Xu L, Chen H, Hu X, Zhang R, Zhang Z, Luo ZW. Average gene length is highly conserved on proaryotes and eukaryotes and diverges between the two kingdoms. Mol Biol and Evol 2006, 23:1107-1108.
    • (2006) Mol Biol and Evol , vol.23 , pp. 1107-1108
    • Xu, L.1    Chen, H.2    Hu, X.3    Zhang, R.4    Zhang, Z.5    Luo, Z.W.6
  • 10
    • 78149416457 scopus 로고    scopus 로고
    • The UCSC Archaeal Genome Browser
    • The UCSC Archaeal Genome Browser. , http://archaea.ucsc.edu/
  • 14
    • 78149412763 scopus 로고    scopus 로고
    • Gene Index - DFCI
    • Gene Index - DFCI. , http://compbio.dfci.harvard.edu/tgi/tgipage.html
  • 15
    • 78149415928 scopus 로고    scopus 로고
    • UniGene home
    • UniGene home. , http://www.ncbi.nlm.nih.gov/sites/entrez?db=UniGene
  • 16
    • 32544458667 scopus 로고    scopus 로고
    • Gene sequence signatures revealed by mining the UniGene affiliation network
    • 10.1093/bioinformatics/bti796, 16339286
    • Zhang J, Zhang L, Coombes KR. Gene sequence signatures revealed by mining the UniGene affiliation network. Bioinformatics 2006, 22:385-391. 10.1093/bioinformatics/bti796, 16339286.
    • (2006) Bioinformatics , vol.22 , pp. 385-391
    • Zhang, J.1    Zhang, L.2    Coombes, K.R.3
  • 17
    • 79959686429 scopus 로고    scopus 로고
    • Alternative splicing prediction database
    • Alternative splicing prediction database. , http://t.caspur.it/ASPicDB/
  • 18
    • 78149413554 scopus 로고    scopus 로고
    • List of distinct cell types in the adult human body
    • Wikipedia
    • Wikipedia List of distinct cell types in the adult human body. Wikipedia., http://en.wikipedia.org/wiki/List_of_distinct_cell_types_in_the_adult_human_body
  • 19
    • 78149414330 scopus 로고    scopus 로고
    • Sponge
    • Wikipedia
    • Wikipedia sponge. Wikipedia., http://en.wikipedia.org/wiki/Sponge
  • 21
    • 0030874420 scopus 로고    scopus 로고
    • Size and complexity among multicellular organisms
    • Bell G. Size and complexity among multicellular organisms. Biol J of the Linnean Society 1997, 60:345-363.
    • (1997) Biol J of the Linnean Society , vol.60 , pp. 345-363
    • Bell, G.1
  • 22
    • 0028163267 scopus 로고
    • Morphological Complexity Increase in Metazoans
    • Valentine JW, et al. Morphological Complexity Increase in Metazoans. Paleobiology 1994, 20:131-142.
    • (1994) Paleobiology , vol.20 , pp. 131-142
    • Valentine, J.W.1
  • 23
    • 42949146575 scopus 로고    scopus 로고
    • MicroRNAs and the advent of vertebrate morphological complexity
    • 10.1073/pnas.0712259105, 2268565, 18287013
    • Heimberg AM, Sempere LF, Moy VN, Donoghue PCJ, Peterson KJ. MicroRNAs and the advent of vertebrate morphological complexity. Proc Natl Acad Sci 2008, 105:2946-2950. 10.1073/pnas.0712259105, 2268565, 18287013.
    • (2008) Proc Natl Acad Sci , vol.105 , pp. 2946-2950
    • Heimberg, A.M.1    Sempere, L.F.2    Moy, V.N.3    Donoghue, P.C.J.4    Peterson, K.J.5
  • 24
    • 78149407428 scopus 로고    scopus 로고
    • Functional evolution in the ancestral lineage of vertebrates or when genomic complexity was wagging its morphological tail
    • Aburomia R, Khaner O, Sidow A. Functional evolution in the ancestral lineage of vertebrates or when genomic complexity was wagging its morphological tail. Journal of Structural and Functl Genomics 2002, 00:1-8.
    • (2002) Journal of Structural and Functl Genomics , vol.0 , pp. 1-8
    • Aburomia, R.1    Khaner, O.2    Sidow, A.3
  • 25
    • 42449084197 scopus 로고    scopus 로고
    • Increasing morphological complexity in multiple parallel lineages of the Crustacea
    • 10.1073/pnas.0709378105, 2290764, 18347335
    • Purvis A, Wills MA. Increasing morphological complexity in multiple parallel lineages of the Crustacea. Proc Natl Acad Sci 2008, 105:4786-4791. 10.1073/pnas.0709378105, 2290764, 18347335.
    • (2008) Proc Natl Acad Sci , vol.105 , pp. 4786-4791
    • Purvis, A.1    Wills, M.A.2
  • 26
    • 78149408021 scopus 로고    scopus 로고
    • Massive turnover of functional sequence in human and other mammalian genomes
    • 10.1101/gr.108795.110, 20693480
    • Meader SJ, Ponting CP, Lunter G. Massive turnover of functional sequence in human and other mammalian genomes. Genome Res 2010, 20:1335-43. 10.1101/gr.108795.110, 20693480.
    • (2010) Genome Res , vol.20 , pp. 1335-1343
    • Meader, S.J.1    Ponting, C.P.2    Lunter, G.3
  • 28
    • 0004205075 scopus 로고
    • Exploring Complexity, An Introduction
    • WH Freeman and Co, New York
    • Nicolis G, Prigogine I. Exploring Complexity, An Introduction. 1989, WH Freeman and Co, New York.
    • (1989)
    • Nicolis, G.1    Prigogine, I.2
  • 29
    • 36148994321 scopus 로고    scopus 로고
    • Natural Distribution
    • 10.1016/j.mbs.2007.07.004, 17822723
    • Gronholm T, Annila A. Natural Distribution. Mathematical Biosciences 2007, 210:659-667. 10.1016/j.mbs.2007.07.004, 17822723.
    • (2007) Mathematical Biosciences , vol.210 , pp. 659-667
    • Gronholm, T.1    Annila, A.2
  • 30
    • 33847219928 scopus 로고    scopus 로고
    • Natural Process - Natural Selection
    • 10.1016/j.bpc.2007.01.005, 17289252
    • Sharma V, Annila A. Natural Process - Natural Selection. Biophys Chem 2007, 127:123-128. 10.1016/j.bpc.2007.01.005, 17289252.
    • (2007) Biophys Chem , vol.127 , pp. 123-128
    • Sharma, V.1    Annila, A.2
  • 31
    • 33747363294 scopus 로고    scopus 로고
    • BBSRC ChickEST Database
    • BBSRC ChickEST Database. , http://www.chick.manchester.ac.uk/new_index.html
  • 33
    • 10744232510 scopus 로고    scopus 로고
    • Generation, annotation, evolutionary analysis, and database integration of 20,000 unique sea urchin EST clusters
    • 10.1101/gr.1674103, 403816, 14656975
    • Poustka AJ, Groth D, Hennig S, Thamm S, Cameron A, Beck A, Reinhardt R, Herwig R, Panopoulou G, Lehrach H. Generation, annotation, evolutionary analysis, and database integration of 20,000 unique sea urchin EST clusters. Genome Res 2003, 13:2736-2746. 10.1101/gr.1674103, 403816, 14656975.
    • (2003) Genome Res , vol.13 , pp. 2736-2746
    • Poustka, A.J.1    Groth, D.2    Hennig, S.3    Thamm, S.4    Cameron, A.5    Beck, A.6    Reinhardt, R.7    Herwig, R.8    Panopoulou, G.9    Lehrach, H.10
  • 34
    • 78149406241 scopus 로고    scopus 로고
    • GenBank
    • GenBank. , http://www.ncbi.nlm.nih.gov/sites/entrez?db=Genome&itool=toolbar
  • 37
    • 78149414034 scopus 로고    scopus 로고
    • List of sequenced eukaryotic genomes
    • Wikipedia
    • Wikipedia List of sequenced eukaryotic genomes. Wikipedia., http://en.wikipedia.org/wiki/List_of_sequenced_eukaryotic_genomes
  • 41
    • 17444363029 scopus 로고    scopus 로고
    • Genome size and organization in the blacklegged tick, lxodes scapularis and the the Southern cattle tick, Boophilus microplus
    • 10.1111/j.1365-2583.2005.00551.x, 15796755
    • Ullmann AJ, Lima CM, Guerrero FD, Piesman J, Black WC. Genome size and organization in the blacklegged tick, lxodes scapularis and the the Southern cattle tick, Boophilus microplus. Insect Mol Biol 2005, 14:217-222. 10.1111/j.1365-2583.2005.00551.x, 15796755.
    • (2005) Insect Mol Biol , vol.14 , pp. 217-222
    • Ullmann, A.J.1    Lima, C.M.2    Guerrero, F.D.3    Piesman, J.4    Black, W.C.5
  • 42
    • 78149407426 scopus 로고    scopus 로고
    • The Aedes aegypti genome project
    • 10.1126/science.1138878, 2868357, 17510324
    • The Aedes aegypti genome project. Science 2007, 316:1718-1722. 10.1126/science.1138878, 2868357, 17510324., http://www.nd.edu/~dseverso/genome.html
    • (2007) Science , vol.316 , pp. 1718-1722
  • 43
    • 33750995860 scopus 로고    scopus 로고
    • The genome of the sea urchin Strongylocentrotus purpuratus
    • 10.1126/science.1133609, 17095691, Sea urchin genome sequencing consortium
    • Sea urchin genome sequencing consortium The genome of the sea urchin Strongylocentrotus purpuratus. Science 2006, 314:941-952. 10.1126/science.1133609, 17095691, Sea urchin genome sequencing consortium.
    • (2006) Science , vol.314 , pp. 941-952
  • 46
    • 84971615495 scopus 로고    scopus 로고
    • Animal genome size database
    • Animal genome size database. , http://www.genomesize.com/search.php
  • 47
    • 78149409830 scopus 로고    scopus 로고
    • Supplementary material table 1
    • Chen H, et al. supplementary material table 1. Mol Biol and Evol Online 2006, http://mbe.oxfordjournals.org/cgi/content/full/msk019/DC1
    • (2006) Mol Biol and Evol Online
    • Chen, H.1
  • 48
    • 78149415064 scopus 로고    scopus 로고
    • Porcine genome sequencing project
    • Porcine genome sequencing project. , http://www.sanger.ac.uk/Projects/S_scrofa/
  • 49
    • 84884279848 scopus 로고    scopus 로고
    • Plant DNA C-value database
    • Plant DNA C-value database. , http://data.kew.org/cvalues/


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.