-
2
-
-
0019405577
-
Generation of biological patterns and form: Some physical, mathematical, and logical aspects
-
Gierer, A. (1981) Generation of biological patterns and form: some physical, mathematical, and logical aspects. Prog. Biophys. Mol. Biol. 37, 1-47
-
(1981)
Prog. Biophys. Mol. Biol.
, vol.37
, pp. 1-47
-
-
Gierer, A.1
-
3
-
-
34249066421
-
GPI-anchored receptor clusters transiently recruit Lyn and Gα for temporary cluster immobilization and Lyn activation: Single-molecule tracking study 1
-
Suzuki, K.G., Fujiwara, T.K., Sanematsu, F., Iino, R., Edidin, M. and Kusumi, A. (2007) GPI-anchored receptor clusters transiently recruit Lyn and Gα for temporary cluster immobilization and Lyn activation: single-molecule tracking study 1. J. Cell Biol. 177, 717-730
-
(2007)
J. Cell Biol.
, vol.177
, pp. 717-730
-
-
Suzuki, K.G.1
Fujiwara, T.K.2
Sanematsu, F.3
Iino, R.4
Edidin, M.5
Kusumi, A.6
-
4
-
-
58149279827
-
Activation of the MAPK module from different spatial locations generates distinct system outputs
-
Inder, K., Harding, A., Plowman, S.J., Philips, M.R., Parton, R.G. and Hancock, J.F. (2008) Activation of the MAPK module from different spatial locations generates distinct system outputs. Mol. Biol. Cell. 19, 4776-4784
-
(2008)
Mol. Biol. Cell.
, vol.19
, pp. 4776-4784
-
-
Inder, K.1
Harding, A.2
Plowman, S.J.3
Philips, M.R.4
Parton, R.G.5
Hancock, J.F.6
-
5
-
-
70849086538
-
Why and how bacteria localize proteins
-
Shapiro, L., McAdams, H.H. and Losick, R. (2009) Why and how bacteria localize proteins. Science 326, 1225-1228
-
(2009)
Science
, vol.326
, pp. 1225-1228
-
-
Shapiro, L.1
McAdams, H.H.2
Losick, R.3
-
6
-
-
71149087930
-
Spatially distributed cell signalling
-
Kholodenko, B.N. (2009) Spatially distributed cell signalling. FEBS Lett. 583, 4006-4012
-
(2009)
FEBS Lett.
, vol.583
, pp. 4006-4012
-
-
Kholodenko, B.N.1
-
7
-
-
0037192461
-
Visualization of a Ran-GTP gradient in interphase and mitotic Xenopus egg extracts
-
Kalab, P., Weis, K. and Heald, R. (2002) Visualization of a Ran-GTP gradient in interphase and mitotic Xenopus egg extracts. Science 295, 2452-2456
-
(2002)
Science
, vol.295
, pp. 2452-2456
-
-
Kalab, P.1
Weis, K.2
Heald, R.3
-
8
-
-
23944436962
-
Spatial coordination of spindle assembly by chromosome-mediated signaling gradients
-
Caudron, M., Bunt, G., Bastiaens, P. and Karsenti, E. (2005) Spatial coordination of spindle assembly by chromosome-mediated signaling gradients. Science 309, 1373-1376
-
(2005)
Science
, vol.309
, pp. 1373-1376
-
-
Caudron, M.1
Bunt, G.2
Bastiaens, P.3
Karsenti, E.4
-
9
-
-
56749171363
-
Regulation of microtubule dynamics by reaction cascades around chromosomes
-
Athale, C.A., Dinarina, A., Mora-Coral, M., Pugieux, C., Nedelec, F. and Karsenti, E. (2008) Regulation of microtubule dynamics by reaction cascades around chromosomes. Science 322, 1243-1247
-
(2008)
Science
, vol.322
, pp. 1243-1247
-
-
Athale, C.A.1
Dinarina, A.2
Mora-Coral, M.3
Pugieux, C.4
Nedelec, F.5
Karsenti, E.6
-
10
-
-
33846781374
-
Phosphoinositides and Rho proteins spatially regulate actin polymerization to initiate and maintain directed movement in a one-dimensional model of a motile cell
-
Dawes, A.T. and Edelstein-Keshet, L. (2007) Phosphoinositides and Rho proteins spatially regulate actin polymerization to initiate and maintain directed movement in a one-dimensional model of a motile cell. Biophys. J. 92, 744-768
-
(2007)
Biophys. J.
, vol.92
, pp. 744-768
-
-
Dawes, A.T.1
Edelstein-Keshet, L.2
-
11
-
-
63249091694
-
Signaling cascades as cellular devices for spatial computations
-
Stelling, J. and Kholodenko, B.N. (2008) Signaling cascades as cellular devices for spatial computations. J. Math. Biol. 58, 35-55
-
(2008)
J. Math. Biol.
, vol.58
, pp. 35-55
-
-
Stelling, J.1
Kholodenko, B.N.2
-
12
-
-
0032864252
-
Spatial gradients of cellular phospho-proteins
-
Brown, G.C. and Kholodenko, B.N. (1999) Spatial gradients of cellular phospho-proteins. FEBS Lett. 457, 452-454
-
(1999)
FEBS Lett.
, vol.457
, pp. 452-454
-
-
Brown, G.C.1
Kholodenko, B.N.2
-
13
-
-
33750619877
-
Potential for control of signaling pathways via cell size and shape
-
Meyers, J., Craig, J. and Odde, D.J. (2006) Potential for control of signaling pathways via cell size and shape. Curr. Biol. 16, 1685-1693
-
(2006)
Curr. Biol.
, vol.16
, pp. 1685-1693
-
-
Meyers, J.1
Craig, J.2
Odde, D.J.3
-
14
-
-
43049156015
-
Cell shape and negative links in regulatory motifs together control spatial information flow in signaling networks
-
Neves, S.R., Tsokas, P., Sarkar, A., Grace, E.A., Rangamani, P., Taubenfeld, S.M., Alberini, C.M., Schaff, J.C., Blitzer, R.D., Moraru, I.I. and Iyengar, R. (2008) Cell shape and negative links in regulatory motifs together control spatial information flow in signaling networks. Cell 133, 666-680
-
(2008)
Cell
, vol.133
, pp. 666-680
-
-
Neves, S.R.1
Tsokas, P.2
Sarkar, A.3
Grace, E.A.4
Rangamani, P.5
Taubenfeld, S.M.6
Alberini, C.M.7
Schaff, J.C.8
Blitzer, R.D.9
Moraru, I.I.10
Iyengar, R.11
-
15
-
-
43049176242
-
Giving space to cell signaling
-
Kholodenko, B.N. and Kolch, W. (2008) Giving space to cell signaling. Cell 133, 566-567
-
(2008)
Cell
, vol.133
, pp. 566-567
-
-
Kholodenko, B.N.1
Kolch, W.2
-
16
-
-
0038608273
-
Four-dimensional organization of protein kinase signaling cascades: The roles of diffusion, endocytosis and molecular motors
-
Kholodenko, B.N. (2003) Four-dimensional organization of protein kinase signaling cascades: the roles of diffusion, endocytosis and molecular motors. J. Exp. Biol. 206, 2073-2082
-
(2003)
J. Exp. Biol.
, vol.206
, pp. 2073-2082
-
-
Kholodenko, B.N.1
-
17
-
-
77950860161
-
Retrograde signaling in axonal regeneration
-
Rishal, I. and Fainzilber, M. (2010) Retrograde signaling in axonal regeneration. Exp. Neurol. 223, 5-10
-
(2010)
Exp. Neurol.
, vol.223
, pp. 5-10
-
-
Rishal, I.1
Fainzilber, M.2
-
18
-
-
0036536713
-
MAP kinase cascade signaling and endocytic trafficking: A marriage of convenience?
-
Kholodenko, B.N. (2002) MAP kinase cascade signaling and endocytic trafficking: a marriage of convenience? Trends Cell Biol. 12, 173-177
-
(2002)
Trends Cell Biol.
, vol.12
, pp. 173-177
-
-
Kholodenko, B.N.1
-
19
-
-
63549090526
-
Positional information generated by spatially distributed signaling cascades
-
Muñoz-García, J., Neufeld, Z. and Kholodenko, B.N. (2009) Positional information generated by spatially distributed signaling cascades. PLoS Comput. Biol. 5, e1000330
-
(2009)
PLoS Comput. Biol.
, vol.5
-
-
Muñoz-García, J.1
Neufeld, Z.2
Kholodenko, B.N.3
-
20
-
-
0038732770
-
EGFR activation coupled to inhibition of tyrosine phosphatases causes lateral signal propagation
-
Reynolds, A.R., Tischer, C., Verveer, P.J., Rocks, O. and Bastiaens, P.I. (2003) EGFR activation coupled to inhibition of tyrosine phosphatases causes lateral signal propagation. Nat. Cell Biol. 5, 447-453
-
(2003)
Nat. Cell Biol.
, vol.5
, pp. 447-453
-
-
Reynolds, A.R.1
Tischer, C.2
Verveer, P.J.3
Rocks, O.4
Bastiaens, P.I.5
-
21
-
-
33751116969
-
Vimentin binding to phosphorylated Erk sterically hinders enzymatic dephosphorylation of the kinase
-
Perlson, E., Michaelevski, I., Kowalsman, N., Ben-Yaakov, K., Shaked, M., Seger, R., Eisenstein, M. and Fainzilber, M. (2006) Vimentin binding to phosphorylated Erk sterically hinders enzymatic dephosphorylation of the kinase. J. Mol. Biol. 364, 938-944
-
(2006)
J. Mol. Biol.
, vol.364
, pp. 938-944
-
-
Perlson, E.1
Michaelevski, I.2
Kowalsman, N.3
Ben-Yaakov, K.4
Shaked, M.5
Seger, R.6
Eisenstein, M.7
Fainzilber, M.8
-
22
-
-
0036532226
-
Self-perpetuating states in signal transduction: Positive feedback, double-negative feedback and bistability
-
Ferrell, Jr, J.E. (2002) Self-perpetuating states in signal transduction: positive feedback, double-negative feedback and bistability. Curr. Opin. Cell Biol. 14, 140-148
-
(2002)
Curr. Opin. Cell Biol.
, vol.14
, pp. 140-148
-
-
Ferrell Jr., J.E.1
-
23
-
-
0842288229
-
Signaling switches and bistability arising from multisite phosphorylation in protein kinase cascades
-
Markevich, N.I., Hoek, J.B. and Kholodenko, B.N. (2004) Signaling switches and bistability arising from multisite phosphorylation in protein kinase cascades. J. Cell Biol. 164, 353-359
-
(2004)
J. Cell Biol.
, vol.164
, pp. 353-359
-
-
Markevich, N.I.1
Hoek, J.B.2
Kholodenko, B.N.3
-
26
-
-
33846042014
-
Long-range signaling by phosphoprotein waves arising from bistability in protein kinase cascades
-
Markevich, N.I., Tsyganov, M.A., Hoek, J.B. and Kholodenko, B.N. (2006) Long-range signaling by phosphoprotein waves arising from bistability in protein kinase cascades. Mol. Syst. Biol. 2, 61
-
(2006)
Mol. Syst. Biol.
, vol.2
, pp. 61
-
-
Markevich, N.I.1
Tsyganov, M.A.2
Hoek, J.B.3
Kholodenko, B.N.4
-
27
-
-
43649095122
-
Wave-pinning and cell polarity from a bistable reaction-diffusion system
-
Mori, Y., Jilkine, A. and Edelstein-Keshet, L. (2008) Wave-pinning and cell polarity from a bistable reaction-diffusion system. Biophys. J. 94, 3684-3697
-
(2008)
Biophys. J.
, vol.94
, pp. 3684-3697
-
-
Mori, Y.1
Jilkine, A.2
Edelstein-Keshet, L.3
-
28
-
-
33747872720
-
Bistable switching and excitable behaviour in the activation of Src at mitosis
-
DOI 10.1093/bioinformatics/btl201
-
Fuss, H., Dubitzky, W., Downes, S. and Kurth, M.J. (2006) Bistable switching and excitable behaviour in the activation of Src at mitosis. Bioinformatics 22, e158-e165 (Pubitemid 44288282)
-
(2006)
Bioinformatics
, vol.22
, Issue.14
-
-
Fuss, H.1
Dubitzky, W.2
Downes, S.3
Kurth, M.J.4
-
29
-
-
68149171467
-
Toggle switches, pulses and oscillations are intrinsic properties of the Src activation/deactivation cycle
-
Kaimachnikov, N.P. and Kholodenko, B.N. (2009) Toggle switches, pulses and oscillations are intrinsic properties of the Src activation/deactivation cycle. FEBS J. 276, 4102-4118
-
(2009)
FEBS J.
, vol.276
, pp. 4102-4118
-
-
Kaimachnikov, N.P.1
Kholodenko, B.N.2
-
30
-
-
33750962907
-
A Ras-induced conformational switch in the Ras activator Son of sevenless
-
Freedman, T.S., Sondermann, H., Friedland, G.D., Kortemme, T., Bar-Sagi, D., Marqusee, S. and Kuriyan, J. (2006) A Ras-induced conformational switch in the Ras activator Son of sevenless. Proc. Natl. Acad. Sci. U.S.A. 103, 16692-16697
-
(2006)
Proc. Natl. Acad. Sci. U.S.A.
, vol.103
, pp. 16692-16697
-
-
Freedman, T.S.1
Sondermann, H.2
Friedland, G.D.3
Kortemme, T.4
Bar-Sagi, D.5
Marqusee, S.6
Kuriyan, J.7
-
31
-
-
33644524741
-
Cell-signalling dynamics in time and space
-
Kholodenko, B.N. (2006) Cell-signalling dynamics in time and space. Nat. Rev. Mol. Cell Biol. 7, 165-176
-
(2006)
Nat. Rev. Mol. Cell Biol.
, vol.7
, pp. 165-176
-
-
Kholodenko, B.N.1
-
32
-
-
35748968807
-
Spatial regulation of Fus3 MAP kinase activity through a reaction-diffusion mechanism in yeast pheromone signalling
-
Maeder, C.I., Hink, M.A., Kinkhabwala, A., Mayr, R., Bastiaens, P.I. and Knop, M. (2007) Spatial regulation of Fus3 MAP kinase activity through a reaction-diffusion mechanism in yeast pheromone signalling. Nat. Cell Biol. 9, 1319-1326
-
(2007)
Nat. Cell Biol.
, vol.9
, pp. 1319-1326
-
-
Maeder, C.I.1
Hink, M.A.2
Kinkhabwala, A.3
Mayr, R.4
Bastiaens, P.I.5
Knop, M.6
-
33
-
-
64349110975
-
Systems-level interactions between insulin-EGF networks amplify mitogenic signaling
-
Borisov, N., Aksamitiene, E., Kiyatkin, A., Legewie, S., Berkhout, J., Maiwald, T., Kaimachnikov, N.P., Timmer, J., Hoek, J.B. and Kholodenko, B.N. (2009) Systems-level interactions between insulin-EGF networks amplify mitogenic signaling. Mol. Syst. Biol. 5, 256
-
(2009)
Mol. Syst. Biol.
, vol.5
, pp. 256
-
-
Borisov, N.1
Aksamitiene, E.2
Kiyatkin, A.3
Legewie, S.4
Berkhout, J.5
Maiwald, T.6
Kaimachnikov, N.P.7
Timmer, J.8
Hoek, J.B.9
Kholodenko, B.N.10
-
34
-
-
0034667593
-
Meaningful relationships: The regulation of the Ras/Raf/MEK/ERK pathway by protein interactions
-
Kolch, W. (2000) Meaningful relationships: the regulation of the Ras/Raf/MEK/ERK pathway by protein interactions. Biochem. J. 351, 289-305
-
(2000)
Biochem. J.
, vol.351
, pp. 289-305
-
-
Kolch, W.1
-
35
-
-
18844364205
-
Subcellular localization determines MAP kinase signal output
-
Harding, A., Tian, T., Westbury, E., Frische, E. and Hancock, J.F. (2005) Subcellular localization determines MAP kinase signal output. Curr. Biol. 15, 869-873
-
(2005)
Curr. Biol.
, vol.15
, pp. 869-873
-
-
Harding, A.1
Tian, T.2
Westbury, E.3
Frische, E.4
Hancock, J.F.5
-
36
-
-
33747429073
-
Bistability from double phosphorylation in signal transduction
-
Ortega, F., Garces, J.L., Mas, F., Kholodenko, B.N. and Cascante, M. (2006) Bistability from double phosphorylation in signal transduction. FEBS J. 273, 3915-3926
-
(2006)
FEBS J.
, vol.273
, pp. 3915-3926
-
-
Ortega, F.1
Garces, J.L.2
Mas, F.3
Kholodenko, B.N.4
Cascante, M.5
-
37
-
-
33645979394
-
Bistability, stochasticity, and oscillations in the mitogen-activated protein kinase cascade
-
Wang, X., Hao, N., Dohlman, H.G. and Elston, T.C. (2006) Bistability, stochasticity, and oscillations in the mitogen-activated protein kinase cascade. Biophys. J. 90, 1961-1978
-
(2006)
Biophys. J.
, vol.90
, pp. 1961-1978
-
-
Wang, X.1
Hao, N.2
Dohlman, H.G.3
Elston, T.C.4
|