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Volumn 38, Issue 17, 2010, Pages

A practical, bioinformatic workflow system for large data sets generated by next-generation sequencing

Author keywords

[No Author keywords available]

Indexed keywords

GUANOSINE TRIPHOSPHATASE; PHOSPHATASE; PROTEIN KINASE;

EID: 77957223031     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gkq667     Document Type: Article
Times cited : (63)

References (84)
  • 2
    • 38449123700 scopus 로고    scopus 로고
    • Profiling C. elegans gene expression with DNA microarrays
    • Portman,D.S. (2006) Profiling C. elegans gene expression with DNA microarrays. WormBook, 20, 1-11.
    • (2006) WormBook , vol.20 , pp. 1-11
    • Portman, D.S.1
  • 3
    • 38449111466 scopus 로고    scopus 로고
    • Gene expression changes associated with aging in C. elegans
    • Golden,T.R. and Melov,S. (2007) Gene expression changes associated with aging in C. elegans. WormBook, 12, 1-12.
    • (2007) WormBook , vol.12 , pp. 1-12
    • Golden, T.R.1    Melov, S.2
  • 4
    • 0036773892 scopus 로고    scopus 로고
    • Whole-genome expression profiles identify gene batteries in Drosophila
    • Stathopoulos,A. and Levine,M. (2002) Whole-genome expression profiles identify gene batteries in Drosophila. Dev. Cell., 3, 464-465.
    • (2002) Dev. Cell. , vol.3 , pp. 464-465
    • Stathopoulos, A.1    Levine, M.2
  • 6
    • 73649118486 scopus 로고    scopus 로고
    • Stage-specific expression profiling of Drosophila spermatogenesis suggests that meiotic sex chromosome inactivation drives genomic relocation of testis-expressed genes
    • Vibranovski,M.D., Lopes,H.F., Karr,T.L. and Long,M. (2009) Stage-specific expression profiling of Drosophila spermatogenesis suggests that meiotic sex chromosome inactivation drives genomic relocation of testis-expressed genes. PLoS Genet., 5, e1000731.
    • (2009) PLoS Genet. , vol.5
    • Vibranovski, M.D.1    Lopes, H.F.2    Karr, T.L.3    Long, M.4
  • 7
    • 59249083109 scopus 로고    scopus 로고
    • Integrated genomic and pharmacological approaches to identify synthetic lethal genes as cancer therapeutic targets
    • Mizuarai,S., Irie,H., Schmatz,D.M. and Kotani,H. (2008) Integrated genomic and pharmacological approaches to identify synthetic lethal genes as cancer therapeutic targets. Curr. Mol. Med., 8, 774-783.
    • (2008) Curr. Mol. Med. , vol.8 , pp. 774-783
    • Mizuarai, S.1    Irie, H.2    Schmatz, D.M.3    Kotani, H.4
  • 8
    • 49649121314 scopus 로고    scopus 로고
    • The impact of genomics in understanding human melanoma progression and metastasis
    • Ren,S., Liu,S., Howell,P. Jr, Xi,Y., Enkemann,S.A., Ju,J. and Riker,A.I. (2008) The impact of genomics in understanding human melanoma progression and metastasis. Cancer Control, 15, 202-215.
    • (2008) Cancer Control , vol.15 , pp. 202-215
    • Ren, S.1    Liu, S.2    Howell P., Jr.3    Xi, Y.4    Enkemann, S.A.5    Ju, J.6    Riker, A.I.7
  • 9
    • 67649402150 scopus 로고    scopus 로고
    • Gene expression profiling and non-small-cell lung cancer: where are we now?
    • Santos,E.S., Blaya,M. and Raez,L.E. (2009) Gene expression profiling and non-small-cell lung cancer: where are we now? Clin. Lung Cancer, 10, 168-173.
    • (2009) Clin. Lung Cancer , vol.10 , pp. 168-173
    • Santos, E.S.1    Blaya, M.2    Raez, L.E.3
  • 10
    • 33747742435 scopus 로고    scopus 로고
    • Gene expression profiles of brain dopamine neurons and relevance to neuropsychiatric disease
    • Greene,J.G. (2006) Gene expression profiles of brain dopamine neurons and relevance to neuropsychiatric disease. J. Physiol., 575, 411-416.
    • (2006) J. Physiol. , vol.575 , pp. 411-416
    • Greene, J.G.1
  • 11
    • 33749237719 scopus 로고    scopus 로고
    • Neuronal gene expression profiling: uncovering the molecular biology of neurodegenerative disease
    • Mufson,E.J., Counts,S.E., Che,S. and Ginsberg,S.D. (2006) Neuronal gene expression profiling: uncovering the molecular biology of neurodegenerative disease. Prog. Brain Res., 158, 197-222.
    • (2006) Prog. Brain Res. , vol.158 , pp. 197-222
    • Mufson, E.J.1    Counts, S.E.2    Che, S.3    Ginsberg, S.D.4
  • 13
    • 0038309513 scopus 로고    scopus 로고
    • Bacterial genomes and infectious diseases
    • Chan,V.L. (2003) Bacterial genomes and infectious diseases. Pediatr. Res., 54, 1-7.
    • (2003) Pediatr. Res. , vol.54 , pp. 1-7
    • Chan, V.L.1
  • 14
    • 33748636918 scopus 로고    scopus 로고
    • Development and application of in vivo expression technology (IVET) for analysing microbial gene expression in complex environments
    • Jackson,R.W. and Giddens,S.R. (2006) Development and application of in vivo expression technology (IVET) for analysing microbial gene expression in complex environments. Infect. Disord. Drug Targets, 6, 207-240.
    • (2006) Infect. Disord. Drug Targets , vol.6 , pp. 207-240
    • Jackson, R.W.1    Giddens, S.R.2
  • 15
    • 67650388509 scopus 로고    scopus 로고
    • Transcriptomes and pathways associated with infectivity, survival and immunogenicity in Brugia malayi L3
    • Li,B.W., Rush,A.C., Mitreva,M., Yin,Y., Spiro,D., Ghedin,E. and Weil,G.J. (2009) Transcriptomes and pathways associated with infectivity, survival and immunogenicity in Brugia malayi L3. BMC Genomics, 10, 267.
    • (2009) BMC Genomics , vol.10 , pp. 267
    • Li, B.W.1    Rush, A.C.2    Mitreva, M.3    Yin, Y.4    Spiro, D.5    Ghedin, E.6    Weil, G.J.7
  • 16
    • 67349256185 scopus 로고    scopus 로고
    • Advanced in silico analysis of expressed sequence tag (EST) data for parasitic nematodes of major socio-economic importance-fundamental insights toward biotechnological outcomes
    • Ranganathan,S., Menon,R. and Gasser,R.B. (2009) Advanced in silico analysis of expressed sequence tag (EST) data for parasitic nematodes of major socio-economic importance-fundamental insights toward biotechnological outcomes. Biotechnol. Adv., 27, 439-448.
    • (2009) Biotechnol. Adv. , vol.27 , pp. 439-448
    • Ranganathan, S.1    Menon, R.2    Gasser, R.B.3
  • 19
    • 74649085604 scopus 로고    scopus 로고
    • Elucidating the transcriptome of Fasciola hepatica - a key to fundamental and biotechnological discoveries for a neglected parasite
    • Young,N.D., Hall,R.S., Jex,A.R., Cantacessi,C. and Gasser,R.B. (2010) Elucidating the transcriptome of Fasciola hepatica - a key to fundamental and biotechnological discoveries for a neglected parasite. Biotechnol. Adv., 28, 222-231.
    • (2010) Biotechnol. Adv. , vol.28 , pp. 222-231
    • Young, N.D.1    Hall, R.S.2    Jex, A.R.3    Cantacessi, C.4    Gasser, R.B.5
  • 23
    • 0024828121 scopus 로고
    • Quantitation of mRNA by the polymerase chain reaction
    • Wang,A.M., Doyle,M.V. and Mark,D.F. (1989) Quantitation of mRNA by the polymerase chain reaction. Proc. Natl Acad. Sci. USA, 86, 9717-9721.
    • (1989) Proc. Natl Acad. Sci. USA , vol.86 , pp. 9717-9721
    • Wang, A.M.1    Doyle, M.V.2    Mark, D.F.3
  • 25
    • 74649084090 scopus 로고    scopus 로고
    • Strategies for undertaking expressed sequence tag (EST) projects
    • Clifton,S.W. and Mitreva,M. (2009) Strategies for undertaking expressed sequence tag (EST) projects. Methods Mol. Biol., 533, 13-32.
    • (2009) Methods Mol. Biol. , vol.533 , pp. 13-32
    • Clifton, S.W.1    Mitreva, M.2
  • 26
    • 24644503098 scopus 로고    scopus 로고
    • Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research
    • Conesa,A., Götz,S., García-Gómez,J.M., Terol,J., Talón,M. and Robles,M. (2005) Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research. Bioinformatics, 21, 3674-3676.
    • (2005) Bioinformatics , vol.21 , pp. 3674-3676
    • Conesa, A.1    Götz, S.2    García-Gómez, J.M.3    Terol, J.4    Talón, M.5    Robles, M.6
  • 28
    • 70449701942 scopus 로고    scopus 로고
    • Sense from sequence reads: methods for alignment and assembly
    • Flicek,P. and Birney,E. (2009) Sense from sequence reads: methods for alignment and assembly. Nat. Methods, 6, S6-S12.
    • (2009) Nat. Methods , vol.6
    • Flicek, P.1    Birney, E.2
  • 29
    • 34547573469 scopus 로고    scopus 로고
    • ESTExplorer: an expressed sequence tag (EST) assembly and annotation platform
    • Nagaraj,S.H., Deshpande,N., Gasser,R.B. and Ranganathan,S. (2007) ESTExplorer: an expressed sequence tag (EST) assembly and annotation platform. Nucleic Acids Res., 35, W143-W147.
    • (2007) Nucleic Acids Res. , vol.35
    • Nagaraj, S.H.1    Deshpande, N.2    Gasser, R.B.3    Ranganathan, S.4
  • 30
    • 84871958585 scopus 로고    scopus 로고
    • In silico analysis of expressed sequence tags from Trichostrongylus vitrinus (Nematoda): comparison of the automated ESTExplorer workflow platform with conventional database searches
    • Nagaraj,S.H., Gasser,R.B., Nisbet,A.J. and Ranganathan,S. (2008) In silico analysis of expressed sequence tags from Trichostrongylus vitrinus (Nematoda): comparison of the automated ESTExplorer workflow platform with conventional database searches. BMC Bioinf., 9, S10.
    • (2008) BMC Bioinf. , vol.9
    • Nagaraj, S.H.1    Gasser, R.B.2    Nisbet, A.J.3    Ranganathan, S.4
  • 31
    • 0032849859 scopus 로고    scopus 로고
    • CAP3: A DNA sequence assembly program
    • Huang,X. and Madan,A. (1999) CAP3: A DNA sequence assembly program. Genome Res., 9, 868-877.
    • (1999) Genome Res. , vol.9 , pp. 868-877
    • Huang, X.1    Madan, A.2
  • 32
    • 0033290515 scopus 로고    scopus 로고
    • ESTScan: a program for detecting, evaluating, and reconstructing potential coding regions in EST sequences
    • Iseli,C., Jongeneel,C.V. and Bucher,P. (1999) ESTScan: a program for detecting, evaluating, and reconstructing potential coding regions in EST sequences. Proc. Int. Conf. Intell. Syst. Mol. Biol., 1, 138-148.
    • (1999) Proc. Int. Conf. Intell. Syst. Mol. Biol. , vol.1 , pp. 138-148
    • Iseli, C.1    Jongeneel, C.V.2    Bucher, P.3
  • 33
    • 53649088131 scopus 로고    scopus 로고
    • Applications of next-generation sequencing technologies in functional genomics
    • Morozova,O. and Marra,M.A. (2008) Applications of next-generation sequencing technologies in functional genomics. Genomics, 92, 255-264.
    • (2008) Genomics , vol.92 , pp. 255-264
    • Morozova, O.1    Marra, M.A.2
  • 34
    • 72849144434 scopus 로고    scopus 로고
    • Sequencing technologies - the next generation
    • Metzker,M.L. (2010) Sequencing technologies - the next generation. Nat. Rev. Genet., 11, 31-46.
    • (2010) Nat. Rev. Genet. , vol.11 , pp. 31-46
    • Metzker, M.L.1
  • 37
    • 22844443383 scopus 로고    scopus 로고
    • Gene expression profiles associated with the transition to parasitism in Ancylostoma caninum larvae
    • Moser,J.M., Freitas,T., Arasu,P. and Gibson,G. (2005) Gene expression profiles associated with the transition to parasitism in Ancylostoma caninum larvae. Mol. Biochem. Parasitol., 143, 39-48.
    • (2005) Mol. Biochem. Parasitol. , vol.143 , pp. 39-48
    • Moser, J.M.1    Freitas, T.2    Arasu, P.3    Gibson, G.4
  • 40
    • 51349167330 scopus 로고    scopus 로고
    • Cytosolic glutathione S-transferases of Oesophagostomum dentatum
    • Joachim,A. and Ruttkowski,B. (2008) Cytosolic glutathione S-transferases of Oesophagostomum dentatum. Parasitology, 135, 1215-1223.
    • (2008) Parasitology , vol.135 , pp. 1215-1223
    • Joachim, A.1    Ruttkowski, B.2
  • 44
    • 33747868144 scopus 로고    scopus 로고
    • KOBAS server: a web-based platform for automated annotation and pathway identification
    • Wu,J., Mao,X., Cai,T., Luo,J. and Wei,L. (2006) KOBAS server: a web-based platform for automated annotation and pathway identification. Nucleic Acids Res., 34, W720-W724.
    • (2006) Nucleic Acids Res. , vol.34
    • Wu, J.1    Mao, X.2    Cai, T.3    Luo, J.4    Wei, L.5
  • 45
    • 39949084468 scopus 로고    scopus 로고
    • iPath: interactive exploration of biochemical pathways and networks
    • Letunic,I., Yamada,T., Kanehisa,M. and Bork,P. (2008) iPath: interactive exploration of biochemical pathways and networks. Trends Biochem. Sci., 33, 101-103.
    • (2008) Trends Biochem. Sci. , vol.33 , pp. 101-103
    • Letunic, I.1    Yamada, T.2    Kanehisa, M.3    Bork, P.4
  • 46
    • 33644864549 scopus 로고    scopus 로고
    • Genome-wide prediction of C. elegans genetic interactions
    • Zhong,W. and Sternberg,P.W. (2006) Genome-wide prediction of C. elegans genetic interactions. Science, 311, 1481-1484.
    • (2006) Science , vol.311 , pp. 1481-1484
    • Zhong, W.1    Sternberg, P.W.2
  • 47
    • 0031024171 scopus 로고    scopus 로고
    • Experimental and computational approaches to estimate solubility and permeability in drug discovery and development settings
    • Lipinski,C., Lombardo,F., Dominy,B. and Feeney,P. (1997) Experimental and computational approaches to estimate solubility and permeability in drug discovery and development settings. Adv. Drug Deliv. Rev., 23, 3-25.
    • (1997) Adv. Drug Deliv. Rev. , vol.23 , pp. 3-25
    • Lipinski, C.1    Lombardo, F.2    Dominy, B.3    Feeney, P.4
  • 49
    • 17244362388 scopus 로고    scopus 로고
    • Mechanistic basis of enzyme-targeted drugs
    • Robertson,J.G. (2005) Mechanistic basis of enzyme-targeted drugs. Biochemistry, 44, 5561-5571.
    • (2005) Biochemistry , vol.44 , pp. 5561-5571
    • Robertson, J.G.1
  • 50
    • 58149185126 scopus 로고    scopus 로고
    • BRENDA, AMENDA and FRENDA the enzyme information system: new content and tools in 2009
    • Chang,A., Scheer,M., Grote,A., Schomburg,I. and Schomburg,D. (2009) BRENDA, AMENDA and FRENDA the enzyme information system: new content and tools in 2009. Nucleic Acids Res., 37, D588-D592.
    • (2009) Nucleic Acids Res. , vol.37
    • Chang, A.1    Scheer, M.2    Grote, A.3    Schomburg, I.4    Schomburg, D.5
  • 51
    • 33645961005 scopus 로고    scopus 로고
    • Construction of gender-enriched cDNA archives for adult Oesophagostomum dentatum by suppressive-subtractive hybridization and a microarray analysis of expressed sequence tags
    • Cottee,P.A., Nisbet,A.J., Abs El-Osta,Y.G., Webster,T.L. and Gasser,R.B. (2006) Construction of gender-enriched cDNA archives for adult Oesophagostomum dentatum by suppressive-subtractive hybridization and a microarray analysis of expressed sequence tags. Parasitology, 132, 691-708.
    • (2006) Parasitology , vol.132 , pp. 691-708
    • Cottee, P.A.1    Nisbet, A.J.2    Abs El-Osta, Y.G.3    Webster, T.L.4    Gasser, R.B.5
  • 52
    • 84946650481 scopus 로고
    • Probable inference, the law of succession, and statistical inference
    • Wilson,E.B. (1927) Probable inference, the law of succession, and statistical inference. J. Am. Stat. Assoc., 22, 209-212.
    • (1927) J. Am. Stat. Assoc. , vol.22 , pp. 209-212
    • Wilson, E.B.1
  • 53
    • 33748634150 scopus 로고    scopus 로고
    • Prospects for exploring molecular developmental processes in Haemonchus contortus
    • Nikolaou,S. and Gasser,R.B. (2006) Prospects for exploring molecular developmental processes in Haemonchus contortus. Int. J. Parasitol., 36, 859-868.
    • (2006) Int. J. Parasitol. , vol.36 , pp. 859-868
    • Nikolaou, S.1    Gasser, R.B.2
  • 56
    • 0242417520 scopus 로고    scopus 로고
    • Molecular characterisation of a male-specific serine/threonine phosphatase from Oesophagostomum dentatum (Nematoda: Strongylida), and functional analysis of homologues in Caenorhabditis elegans
    • Boag,P.R., Ren,P., Newton,S.E. and Gasser,R.B. (2003) Molecular characterisation of a male-specific serine/threonine phosphatase from Oesophagostomum dentatum (Nematoda: Strongylida), and functional analysis of homologues in Caenorhabditis elegans. Int. J. Parasitol., 33, 313-325.
    • (2003) Int. J. Parasitol. , vol.33 , pp. 313-325
    • Boag, P.R.1    Ren, P.2    Newton, S.E.3    Gasser, R.B.4
  • 58
    • 34047147107 scopus 로고    scopus 로고
    • Oesophagostomum dentatum: potential as a model for genomic studies of strongylid nematodes, with biotechnological prospects
    • Gasser,R.B., Cottee,P., Nisbet,A.J., Ruttkowski,B., Ranganathan,S. and Joachim,A. (2007) Oesophagostomum dentatum: potential as a model for genomic studies of strongylid nematodes, with biotechnological prospects. Biotechnol. Adv., 25, 281-293.
    • (2007) Biotechnol. Adv. , vol.25 , pp. 281-293
    • Gasser, R.B.1    Cottee, P.2    Nisbet, A.J.3    Ruttkowski, B.4    Ranganathan, S.5    Joachim, A.6
  • 60
    • 33745238969 scopus 로고    scopus 로고
    • Identification of novel chondroitin proteoglycans in Caenorhabditis elegans: embryonic cell division depends on CPG-1 and CPG-2
    • Olson,S.K., Bishop,J.R., Yates,J.R., Oegema,K. and Esko,J.D. (2006) Identification of novel chondroitin proteoglycans in Caenorhabditis elegans: embryonic cell division depends on CPG-1 and CPG-2. J. Cell. Biol., 173, 985-994.
    • (2006) J. Cell. Biol. , vol.173 , pp. 985-994
    • Olson, S.K.1    Bishop, J.R.2    Yates, J.R.3    Oegema, K.4    Esko, J.D.5
  • 62
    • 0037439137 scopus 로고    scopus 로고
    • An Eph receptor sperm-sensing control mechanism for oocyte meiotic maturation in Caenorhabditis elegans
    • Miller,M.A., Ruest,P.J., Kosinski,M., Hanks,S.K. and Greenstein,D. (2003) An Eph receptor sperm-sensing control mechanism for oocyte meiotic maturation in Caenorhabditis elegans. Genes Dev., 17, 187-200.
    • (2003) Genes Dev. , vol.17 , pp. 187-200
    • Miller, M.A.1    Ruest, P.J.2    Kosinski, M.3    Hanks, S.K.4    Greenstein, D.5
  • 63
    • 1842506391 scopus 로고    scopus 로고
    • Profiling of gender-specific gene expression for Trichostrongylus vitrinus (Nematoda: Strongylida) by microarray analysis of expressed sequence tag libraries constructed by suppressive-subtractive hybridisation
    • Nisbet,A.J. and Gasser,R.B. (2004) Profiling of gender-specific gene expression for Trichostrongylus vitrinus (Nematoda: Strongylida) by microarray analysis of expressed sequence tag libraries constructed by suppressive-subtractive hybridisation. Int. J. Parasitol., 34, 633-643.
    • (2004) Int. J. Parasitol. , vol.34 , pp. 633-643
    • Nisbet, A.J.1    Gasser, R.B.2
  • 64
    • 4644371281 scopus 로고    scopus 로고
    • Quantitative analysis of gender-regulated transcripts in the filarial nematode Brugia malayi by real-time RT-PCR
    • Li,B.W., Rush,A.C., Tan,J. and Weil,G.J. (2004) Quantitative analysis of gender-regulated transcripts in the filarial nematode Brugia malayi by real-time RT-PCR. Mol. Biochem. Parasitol., 137, 329-337.
    • (2004) Mol. Biochem. Parasitol. , vol.137 , pp. 329-337
    • Li, B.W.1    Rush, A.C.2    Tan, J.3    Weil, G.J.4
  • 65
    • 22844438009 scopus 로고    scopus 로고
    • Profiling of gender-regulated gene transcripts in the filarial nematode Brugia malayi by cDNA oligonucleotide array analysis
    • Li,B.W., Rush,A.C., Crosby,S.D., Warren,W.C., Williams,S.A., Mitreva,M. and Weil,G.J. (2005) Profiling of gender-regulated gene transcripts in the filarial nematode Brugia malayi by cDNA oligonucleotide array analysis. Mol. Biochem. Parasitol., 143, 49-57.
    • (2005) Mol. Biochem. Parasitol. , vol.143 , pp. 49-57
    • Li, B.W.1    Rush, A.C.2    Crosby, S.D.3    Warren, W.C.4    Williams, S.A.5    Mitreva, M.6    Weil, G.J.7
  • 66
    • 56249104176 scopus 로고    scopus 로고
    • Stage- and gender-specific proteomic analysis of Brugia malayi excretory-secretory products
    • Moreno,Y. and Geary,T.G. (2008) Stage- and gender-specific proteomic analysis of Brugia malayi excretory-secretory products. PLoS Negl. Trop. Dis., 2, e326.
    • (2008) PLoS Negl. Trop. Dis. , vol.2
    • Moreno, Y.1    Geary, T.G.2
  • 67
    • 5644235358 scopus 로고    scopus 로고
    • Characterization of major sperm protein genes and their expression in Oesophagostomum dentatum (Nematoda: Strongylida)
    • Cottee,P.A., Nisbet,A.J., Boag,P.R., Larsen,M. and Gasser,R.B. (2004) Characterization of major sperm protein genes and their expression in Oesophagostomum dentatum (Nematoda: Strongylida). Parasitology, 129, 479-490.
    • (2004) Parasitology , vol.129 , pp. 479-490
    • Cottee, P.A.1    Nisbet, A.J.2    Boag, P.R.3    Larsen, M.4    Gasser, R.B.5
  • 68
  • 70
    • 33846839303 scopus 로고    scopus 로고
    • Vaccines against blood-feeding nematodes of humans and livestock
    • Bethony,J.M., Loukas,A., Hotez,P.J. and Knox,D.P. (2006) Vaccines against blood-feeding nematodes of humans and livestock. Parasitology, 133, S63-S79.
    • (2006) Parasitology , vol.133
    • Bethony, J.M.1    Loukas, A.2    Hotez, P.J.3    Knox, D.P.4
  • 71
    • 0014855841 scopus 로고
    • Necrotic enteritis of pigs caused by infection with Oesophagostomum spp
    • Stockdale,P.H. (1970) Necrotic enteritis of pigs caused by infection with Oesophagostomum spp. Br. Vet. J., 126, 526-530.
    • (1970) Br. Vet. J. , vol.126 , pp. 526-530
    • Stockdale, P.H.1
  • 73
    • 0028971793 scopus 로고
    • Metalloproteases and serineproteases are involved in the cleavage of the two tumour necrosis factor (TNF) receptors to soluble forms in the myeloid cell lines U-937 and THP-1
    • Björnberg,F., Lantz,M. and Gullberg,U. (1995) Metalloproteases and serineproteases are involved in the cleavage of the two tumour necrosis factor (TNF) receptors to soluble forms in the myeloid cell lines U-937 and THP-1. Scand. J. Immunol., 42, 418-424.
    • (1995) Scand. J. Immunol. , vol.42 , pp. 418-424
    • Björnberg, F.1    Lantz, M.2    Gullberg, U.3
  • 74
    • 0025260106 scopus 로고
    • Allergens as proteases: an Aspergillus fumigatus proteinase directly induces human epithelial cell detachment
    • Robinson,B.W., Venaille,T.J., Mendis,A.H. and McAleer,R. (1990) Allergens as proteases: an Aspergillus fumigatus proteinase directly induces human epithelial cell detachment. J. Allergy Clin. Immunol., 86, 726-731.
    • (1990) J. Allergy Clin. Immunol. , vol.86 , pp. 726-731
    • Robinson, B.W.1    Venaille, T.J.2    Mendis, A.H.3    McAleer, R.4
  • 76
    • 0029989299 scopus 로고    scopus 로고
    • Cloning and characterization of Ancylostoma-secreted protein. A novel protein associated with the transition to parasitism by infective hookworm larvae
    • Hawdon,J.M., Jones,B.F., Hoffman,D.R. and Hotez,P.J. (1996) Cloning and characterization of Ancylostoma-secreted protein. A novel protein associated with the transition to parasitism by infective hookworm larvae. J. Biol. Chem., 271, 6672-6678.
    • (1996) J. Biol. Chem. , vol.271 , pp. 6672-6678
    • Hawdon, J.M.1    Jones, B.F.2    Hoffman, D.R.3    Hotez, P.J.4
  • 77
    • 0142124395 scopus 로고    scopus 로고
    • Molecular characterisation of the Ancylostoma-secreted protein family from the adult stage of Ancylostoma caninum
    • Zhan,B., Liu,Y., Badamchian,M., Williamson,A., Feng,J., Loukas,A., Hawdon,J.M. and Hotez,P.J. (2003) Molecular characterisation of the Ancylostoma-secreted protein family from the adult stage of Ancylostoma caninum. Int. J. Parasitol., 33, 897-907.
    • (2003) Int. J. Parasitol. , vol.33 , pp. 897-907
    • Zhan, B.1    Liu, Y.2    Badamchian, M.3    Williamson, A.4    Feng, J.5    Loukas, A.6    Hawdon, J.M.7    Hotez, P.J.8
  • 78
    • 59149091643 scopus 로고    scopus 로고
    • Proteomic analysis of the excretory/secretory component of the blood-feeding stage of the hookworm, Ancylostoma caninum
    • Mulvenna,J., Hamilton,B., Nagaraj,S., Smyth,D., Loukas,A. and Gorman,J. (2009) Proteomic analysis of the excretory/secretory component of the blood-feeding stage of the hookworm, Ancylostoma caninum. Mol. Cell Proteomics, 8, 109-121.
    • (2009) Mol. Cell Proteomics , vol.8 , pp. 109-121
    • Mulvenna, J.1    Hamilton, B.2    Nagaraj, S.3    Smyth, D.4    Loukas, A.5    Gorman, J.6
  • 79
    • 0034901385 scopus 로고    scopus 로고
    • Comparative studies on the development of Oesophagostomum dentatum in vitro and in vivo
    • Joachim,A., Ruttkowski,B. and Daugschies,A. (2001) Comparative studies on the development of Oesophagostomum dentatum in vitro and in vivo. Parasitol. Res., 87, 37-42.
    • (2001) Parasitol. Res. , vol.87 , pp. 37-42
    • Joachim, A.1    Ruttkowski, B.2    Daugschies, A.3
  • 80
    • 33845338444 scopus 로고    scopus 로고
    • A combined bioinformatics and chemoinformatics approach for the development of new antiparasitic drugs
    • Krasky,A., Rohwer,A., Schroeder,J. and Selzer,P.M. (2007) A combined bioinformatics and chemoinformatics approach for the development of new antiparasitic drugs. Genomics, 89, 36-43.
    • (2007) Genomics , vol.89 , pp. 36-43
    • Krasky, A.1    Rohwer, A.2    Schroeder, J.3    Selzer, P.M.4
  • 83
    • 77950533242 scopus 로고    scopus 로고
    • Drug target prediction and prioritization: using orthology to predict essentiality in parasite genomes
    • Doyle,M.A., Gasser,R.B., Woodcroft,B.J., Hall,R.S. and Ralph,S.A. (2010) Drug target prediction and prioritization: using orthology to predict essentiality in parasite genomes. BMC Genomics, 11, 222.
    • (2010) BMC Genomics , vol.11 , pp. 222
    • Doyle, M.A.1    Gasser, R.B.2    Woodcroft, B.J.3    Hall, R.S.4    Ralph, S.A.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.