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Volumn 107, Issue 34, 2010, Pages 15117-15122

Clustering of dispersed ribosomal DNA and its role in gene regulation and chromosome-end associations in malaria parasites

Author keywords

Nucleolus; Nucleus; Telomeres; Transcription regulation

Indexed keywords

DNA; DNA FRAGMENT; RIBOSOME DNA; PRIMER DNA; PROTOZOAL DNA;

EID: 77957011313     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.1001045107     Document Type: Article
Times cited : (23)

References (39)
  • 1
    • 55849109584 scopus 로고    scopus 로고
    • The epigenetics of rRNA genes: From molecular to chromosome biology
    • McStay B, Grummt I (2008) The epigenetics of rRNA genes: From molecular to chromosome biology. Annu Rev Cell Dev Biol 24:131-157.
    • (2008) Annu Rev Cell Dev Biol , vol.24 , pp. 131-157
    • McStay, B.1    Grummt, I.2
  • 3
    • 0032487530 scopus 로고    scopus 로고
    • Mutational analysis of the structure and localization of the nucleolus in the yeast Saccharomyces cerevisiae
    • Oakes M, et al. (1998) Mutational analysis of the structure and localization of the nucleolus in the yeast Saccharomyces cerevisiae. J Cell Biol 143:23-34.
    • (1998) J Cell Biol , vol.143 , pp. 23-34
    • Oakes, M.1
  • 4
    • 0021109045 scopus 로고
    • Cloning and characterisation of the rRNA genes from the human malaria parasite Plasmodium falciparum
    • Langsley G, Hyde JE, Goman M, Scaife JG (1983) Cloning and characterisation of the rRNA genes from the human malaria parasite Plasmodium falciparum. Nucleic Acids Res 11:8703-8717.
    • (1983) Nucleic Acids Res , vol.11 , pp. 8703-8717
    • Langsley, G.1    Hyde, J.E.2    Goman, M.3    Scaife, J.G.4
  • 5
    • 0023645019 scopus 로고
    • A histidine-rich protein gene marks a linkage group favored strongly in a genetic cross of Plasmodium falciparum
    • Wellems TE, et al. (1987) A histidine-rich protein gene marks a linkage group favored strongly in a genetic cross of Plasmodium falciparum. Cell 49:633-642.
    • (1987) Cell , vol.49 , pp. 633-642
    • Wellems, T.E.1
  • 6
    • 0037015614 scopus 로고    scopus 로고
    • Genome sequence of the human malaria parasite Plasmodium falciparum
    • Gardner MJ, et al. (2002) Genome sequence of the human malaria parasite Plasmodium falciparum. Nature 419:498-511.
    • (2002) Nature , vol.419 , pp. 498-511
    • Gardner, M.J.1
  • 7
    • 0023616128 scopus 로고
    • Structurally distinct, stage-specific ribosomes occur in Plasmodium
    • Gunderson JH, et al. (1987) Structurally distinct, stage-specific ribosomes occur in Plasmodium. Science 238:933-937.
    • (1987) Science , vol.238 , pp. 933-937
    • Gunderson, J.H.1
  • 8
    • 0024435053 scopus 로고
    • Developmental regulation of stage-specific ribosome populations in Plasmodium
    • DOI 10.1038/342438a0
    • Waters AP, Syin C, McCutchan TF (1989) Developmental regulation of stage-specific ribosome populations in Plasmodium. Nature 342:438-440. (Pubitemid 19277520)
    • (1989) Nature , vol.342 , Issue.6248 , pp. 438-440
    • Waters, A.P.1    Syin, C.2    McCutchan, T.F.3
  • 9
    • 0345791502 scopus 로고    scopus 로고
    • The effects of glucose concentration on the reciprocal regulation of rRNA promoters in Plasmodium falciparum
    • Fang J, Sullivan M, McCutchan TF (2004) The effects of glucose concentration on the reciprocal regulation of rRNA promoters in Plasmodium falciparum. J Biol Chem 279:720-725.
    • (2004) J Biol Chem , vol.279 , pp. 720-725
    • Fang, J.1    Sullivan, M.2    McCutchan, T.F.3
  • 10
    • 14844304405 scopus 로고    scopus 로고
    • The unusually large Plasmodium telomerase reverse-transcriptase localizes in a discrete compartment associated with the nucleolus
    • Figueiredo LM, et al. (2005) The unusually large Plasmodium telomerase reverse-transcriptase localizes in a discrete compartment associated with the nucleolus. Nucleic Acids Res 33:1111-1122.
    • (2005) Nucleic Acids Res , vol.33 , pp. 1111-1122
    • Figueiredo, L.M.1
  • 11
    • 0037102414 scopus 로고    scopus 로고
    • Thermoregulation in a parasite's life cycle
    • Fang J, McCutchan TF (2002) Thermoregulation in a parasite's life cycle. Nature 418:742.
    • (2002) Nature , vol.418 , pp. 742
    • Fang, J.1    McCutchan, T.F.2
  • 12
    • 6344244708 scopus 로고    scopus 로고
    • Transcription of rDNA in the yeast Saccharomyces cerevisiae
    • Molecular Biology Intelligence Unit
    • Nomura M, Nogi Y, Oakes M (2004) Transcription of rDNA in the yeast Saccharomyces cerevisiae. Molecular Biology Intelligence Unit. The Nucleolus 128-153.
    • (2004) The Nucleolus , pp. 128-153
    • Nomura, M.1    Nogi, Y.2    Oakes, M.3
  • 14
    • 33746425864 scopus 로고    scopus 로고
    • Efficient site-specific integration in Plasmodium falciparum chromosomes mediated by mycobacteriophage Bxb1 integrase
    • Nkrumah LJ, et al. (2006) Efficient site-specific integration in Plasmodium falciparum chromosomes mediated by mycobacteriophage Bxb1 integrase. Nat Methods 3:615-621.
    • (2006) Nat Methods , vol.3 , pp. 615-621
    • Nkrumah, L.J.1
  • 15
    • 77957115434 scopus 로고    scopus 로고
    • Identification of a role for the PfEMP1 semi-conserved head structure in protein trafficking to the surface of Plasmodium falciparum infected red blood cells
    • Melcher M, et al. (2010) Identification of a role for the PfEMP1 semi-conserved head structure in protein trafficking to the surface of Plasmodium falciparum infected red blood cells. Cell Microbiol.
    • (2010) Cell Microbiol
    • Melcher, M.1
  • 16
    • 0034718886 scopus 로고    scopus 로고
    • Frequent ectopic recombination of virulence factor genes in telomeric chromosome clusters of P. falciparum
    • Freitas-Junior LH, et al. (2000) Frequent ectopic recombination of virulence factor genes in telomeric chromosome clusters of P. falciparum. Nature 407:1018-1022.
    • (2000) Nature , vol.407 , pp. 1018-1022
    • Freitas-Junior, L.H.1
  • 17
    • 33644557773 scopus 로고    scopus 로고
    • Transient homologous chromosome pairing marks the onset of X inactivation
    • DOI 10.1126/science.1122984
    • Xu N, Tsai CL, Lee JT (2006) Transient homologous chromosome pairing marks the onset of X inactivation. Science 311:1149-1152. (Pubitemid 43305953)
    • (2006) Science , vol.311 , Issue.5764 , pp. 1149-1152
    • Xu, N.1    Tsai, C.-L.2    Lee, J.T.3
  • 18
    • 39049159775 scopus 로고    scopus 로고
    • Controlled exchange of chromosomal arms reveals principles driving telomere interactions in yeast
    • Schober H, et al. (2008) Controlled exchange of chromosomal arms reveals principles driving telomere interactions in yeast. Genome Res 18:261-271.
    • (2008) Genome Res , vol.18 , pp. 261-271
    • Schober, H.1
  • 19
    • 36549069632 scopus 로고    scopus 로고
    • 5′ Flanking region of var genes nucleate histone modification patterns linked to phenotypic inheritance of virulence traits in malaria parasites
    • Lopez-Rubio JJ, et al. (2007) 5′ Flanking region of var genes nucleate histone modification patterns linked to phenotypic inheritance of virulence traits in malaria parasites. Mol Microbiol 66:1296-1305.
    • (2007) Mol Microbiol , vol.66 , pp. 1296-1305
    • Lopez-Rubio, J.J.1
  • 20
    • 0026552961 scopus 로고
    • Transcription mapping of a 100 kb locus of Plasmodium falciparum identifies an intergenic region in which transcription terminates and reinitiates
    • Lanzer M, de Bruin D, Ravetch JV (1992) Transcription mapping of a 100 kb locus of Plasmodium falciparum identifies an intergenic region in which transcription terminates and reinitiates. EMBO J 11:1949-1955.
    • (1992) EMBO J , vol.11 , pp. 1949-1955
    • Lanzer, M.1    De Bruin, D.2    Ravetch, J.V.3
  • 21
    • 0017294644 scopus 로고
    • HeLa cell deoxyribonucleic acid dependent RNA polymerases: Function and properties of the class III enzymes
    • Weil PA, Blatti SP (1976) HeLa cell deoxyribonucleic acid dependent RNA polymerases: Function and properties of the class III enzymes. Biochemistry 15:1500-1509.
    • (1976) Biochemistry , vol.15 , pp. 1500-1509
    • Weil, P.A.1    Blatti, S.P.2
  • 22
    • 0033546210 scopus 로고    scopus 로고
    • The organization of replication and transcription
    • Cook PR (1999) The organization of replication and transcription. Science 284:1790-1795.
    • (1999) Science , vol.284 , pp. 1790-1795
    • Cook, P.R.1
  • 23
    • 67649766870 scopus 로고    scopus 로고
    • Transcription factories: Gene expression in unions?
    • Sutherland H, Bickmore WA (2009) Transcription factories: Gene expression in unions? Nat Rev Genet 10:457-466.
    • (2009) Nat Rev Genet , vol.10 , pp. 457-466
    • Sutherland, H.1    Bickmore, W.A.2
  • 24
    • 60649095351 scopus 로고    scopus 로고
    • Genome-wide analysis of heterochromatin associates clonally variant gene regulation with perinuclear repressive centers in malaria parasites
    • Lopez-Rubio JJ, Mancio-Silva L, Scherf A (2009) Genome-wide analysis of heterochromatin associates clonally variant gene regulation with perinuclear repressive centers in malaria parasites. Cell Host Microbe 5:179-190.
    • (2009) Cell Host Microbe , vol.5 , pp. 179-190
    • Lopez-Rubio, J.J.1    Mancio-Silva, L.2    Scherf, A.3
  • 25
    • 20144389331 scopus 로고    scopus 로고
    • Telomeric heterochromatin propagation and histone acetylation control mutually exclusive expression of antigenic variation genes in malaria parasites
    • Freitas-Junior LH, et al. (2005) Telomeric heterochromatin propagation and histone acetylation control mutually exclusive expression of antigenic variation genes in malaria parasites. Cell 121:25-36.
    • (2005) Cell , vol.121 , pp. 25-36
    • Freitas-Junior, L.H.1
  • 26
    • 5444243359 scopus 로고    scopus 로고
    • Active genes dynamically colocalize to shared sites of ongoing transcription
    • Osborne CS, et al. (2004) Active genes dynamically colocalize to shared sites of ongoing transcription. Nat Genet 36:1065-1071.
    • (2004) Nat Genet , vol.36 , pp. 1065-1071
    • Osborne, C.S.1
  • 27
    • 13444257509 scopus 로고    scopus 로고
    • Chromosome looping in yeast: Telomere pairing and coordinated movement reflect anchoring efficiency and territorial organization
    • DOI 10.1083/jcb.200409091
    • Bystricky K, Laroche T, van Houwe G, Blaszczyk M, Gasser SM (2005) Chromosome looping in yeast: Telomere pairing and coordinated movement reflect anchoring efficiency and territorial organization. J Cell Biol 168:375-387. (Pubitemid 40205061)
    • (2005) Journal of Cell Biology , vol.168 , Issue.3 , pp. 375-387
    • Bystricky, K.1    Laroche, T.2    Van Houwe, G.3    Blaszczyk, M.4    Gasser, S.M.5
  • 28
    • 0035316574 scopus 로고    scopus 로고
    • Chromosome territories, nuclear architecture and gene regulation in mammalian cells
    • Cremer T, Cremer C (2001) Chromosome territories, nuclear architecture and gene regulation in mammalian cells. Nat Rev Genet 2:292-301.
    • (2001) Nat Rev Genet , vol.2 , pp. 292-301
    • Cremer, T.1    Cremer, C.2
  • 29
    • 0037083982 scopus 로고    scopus 로고
    • A central role for Plasmodium falciparum subtelomeric regions in spatial positioning and telomere length regulation
    • Figueiredo LM, Freitas-Junior LH, Bottius E, Olivo-Marin JC, Scherf A (2002) A central role for Plasmodium falciparum subtelomeric regions in spatial positioning and telomere length regulation. EMBO J 21:815-824.
    • (2002) EMBO J , vol.21 , pp. 815-824
    • Figueiredo, L.M.1    Freitas-Junior, L.H.2    Bottius, E.3    Olivo-Marin, J.C.4    Scherf, A.5
  • 30
    • 0036500346 scopus 로고    scopus 로고
    • A genetic screen for improved plasmid segregation reveals a role for Rep20 in the interaction of Plasmodium falciparum chromosomes
    • O'Donnell RA, et al. (2002) A genetic screen for improved plasmid segregation reveals a role for Rep20 in the interaction of Plasmodium falciparum chromosomes. EMBO J 21:1231-1239.
    • (2002) EMBO J , vol.21 , pp. 1231-1239
    • O'Donnell, R.A.1
  • 31
    • 0036804486 scopus 로고    scopus 로고
    • Three multigene families in Plasmodium parasites: Facts and questions
    • DOI 10.1016/S0020-7519(02)00111-X, PII S002075190200111X
    • Mercereau-Puijalon O, Barale JC, Bischoff E (2002) Three multigene families in Plasmodium parasites: Facts and questions. Int J Parasitol 32:1323-1344. (Pubitemid 35279173)
    • (2002) International Journal for Parasitology , vol.32 , Issue.11 , pp. 1323-1344
    • Mercereau-Puijalon, O.1    Barale, J.-C.2    Bischoff, E.3
  • 32
    • 0035575519 scopus 로고    scopus 로고
    • From snapshots to moving pictures: New perspectives on nuclear organization
    • Heun P, Taddei A, Gasser SM (2001) From snapshots to moving pictures: New perspectives on nuclear organization. Trends Cell Biol 11:519-525.
    • (2001) Trends Cell Biol , vol.11 , pp. 519-525
    • Heun, P.1    Taddei, A.2    Gasser, S.M.3
  • 33
    • 47649100089 scopus 로고    scopus 로고
    • Differential association of Orc1 and Sir2 proteins to telomeric domains in Plasmodium falciparum
    • Mancio-Silva L, Rojas-Meza AP, Vargas M, Scherf A, Hernandez-Rivas R (2008) Differential association of Orc1 and Sir2 proteins to telomeric domains in Plasmodium falciparum. J Cell Sci 121:2046-2053.
    • (2008) J Cell Sci , vol.121 , pp. 2046-2053
    • Mancio-Silva, L.1    Rojas-Meza, A.P.2    Vargas, M.3    Scherf, A.4    Hernandez-Rivas, R.5
  • 34
    • 4243071596 scopus 로고    scopus 로고
    • The transcriptome of the intraerythrocytic developmental cycle of Plasmodium falciparum
    • Bozdech Z, et al. (2003) The transcriptome of the intraerythrocytic developmental cycle of Plasmodium falciparum. PLoS Biol 1:E5.
    • (2003) PLoS Biol , vol.1
    • Bozdech, Z.1
  • 35
    • 0021686178 scopus 로고
    • Protein and nucleic acid synthesis during synchronized growth of Plasmodium falciparum
    • Gritzmacher CA, Reese RT (1984) Protein and nucleic acid synthesis during synchronized growth of Plasmodium falciparum. J Bacteriol 160:1165-1167. (Pubitemid 15222717)
    • (1984) Journal of Bacteriology , vol.160 , Issue.3 , pp. 1165-1167
    • Gritzmacher, C.A.1    Reese, R.T.2
  • 36
    • 33846117155 scopus 로고    scopus 로고
    • A novel protein kinase family in Plasmodium falciparum is differentially transcribed and secreted to various cellular compartments of the host cell
    • Nunes MC, Goldring JP, Doerig C, Scherf A (2007) A novel protein kinase family in Plasmodium falciparum is differentially transcribed and secreted to various cellular compartments of the host cell. Mol Microbiol 63:391-403.
    • (2007) Mol Microbiol , vol.63 , pp. 391-403
    • Nunes, M.C.1    Goldring, J.P.2    Doerig, C.3    Scherf, A.4
  • 37
    • 77957171165 scopus 로고    scopus 로고
    • Transfection of Plasmodium falciparum
    • 5th edition
    • Cowman A, et al. (2008) Transfection of Plasmodium falciparum. Methods in Malaria Research 5th edition:281-301.
    • (2008) Methods in Malaria Research , pp. 281-301
    • Cowman, A.1
  • 38
    • 0035856691 scopus 로고    scopus 로고
    • A pol I transcriptional body associated with VSG mono-allelic expression in Trypanosoma brucei
    • Navarro M, Gull K (2001) A pol I transcriptional body associated with VSG mono-allelic expression in Trypanosoma brucei. Nature 414:759-763.
    • (2001) Nature , vol.414 , pp. 759-763
    • Navarro, M.1    Gull, K.2
  • 39
    • 0033971074 scopus 로고    scopus 로고
    • A simple RNA analysis method shows var and rif multigene family expression patterns in Plasmodium falciparum
    • DOI 10.1016/S0166-6851(99)00193-0, PII S0166685199001930
    • Kyes S, Pinches R, Newbold C (2000) A simple RNA analysis method shows var and rif multigene family expression patterns in Plasmodium falciparum. Mol Biochem Parasitol 105:311-315. (Pubitemid 30067771)
    • (2000) Molecular and Biochemical Parasitology , vol.105 , Issue.2 , pp. 311-315
    • Kyes, S.1    Pinches, R.2    Newbold, C.3


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