메뉴 건너뛰기




Volumn 107, Issue 34, 2010, Pages 15157-15162

TCF4 and CDX2, major transcription factors for intestinal function, converge on the same cis-regulatory regions

Author keywords

Context specificity of signaling; Genome wide chromatin immunoprecipitation; Signaling; Tissue specific gene regulation; Wnt signaling in intestine

Indexed keywords

CIS ACTING ELEMENT; DNA; MYC PROTEIN; TRANSCRIPTION FACTOR; TRANSCRIPTION FACTOR CDX2; TRANSCRIPTION FACTOR TCF4; UNCLASSIFIED DRUG; WNT PROTEIN; BASIC HELIX LOOP HELIX LEUCINE ZIPPER TRANSCRIPTION FACTOR; CDX2 PROTEIN, HUMAN; HOMEODOMAIN PROTEIN; MESSENGER RNA; RNA; TCF4 PROTEIN, HUMAN;

EID: 77956988273     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.1003822107     Document Type: Article
Times cited : (74)

References (39)
  • 1
    • 0025906410 scopus 로고
    • Homeobox gene expression in the intestinal epithelium of adult mice
    • James R, Kazenwadel J (1991) Homeobox gene expression in the intestinal epithelium of adult mice. J Biol Chem 266:3246-3251. (Pubitemid 21909201)
    • (1991) Journal of Biological Chemistry , vol.266 , Issue.5 , pp. 3246-3251
    • James, R.1    Kazenwadel, J.2
  • 2
    • 0030032310 scopus 로고    scopus 로고
    • An intestine-specific homeobox gene regulates proliferation and differentiation
    • Suh E, Traber PG (1996) An intestine-specific homeobox gene regulates proliferation and differentiation. Mol Cell Biol 16:619-625. (Pubitemid 26029101)
    • (1996) Molecular and Cellular Biology , vol.16 , Issue.2 , pp. 619-625
    • Suh, E.1    Traber, P.G.2
  • 5
    • 33847315195 scopus 로고    scopus 로고
    • Regulation of Cdx2 expression by promoter methylation, and effects of Cdx2 transfection on morphology and gene expression of human esophageal epithelial cells
    • DOI 10.1093/carcin/bgl176
    • Liu T, et al. (2007) Regulation of Cdx2 expression by promoter methylation, and effects of Cdx2 transfection on morphology and gene expression of human esophageal epithelial cells. Carcinogenesis 28:488-496. (Pubitemid 46321867)
    • (2007) Carcinogenesis , vol.28 , Issue.2 , pp. 488-496
    • Liu, T.1    Zhang, X.2    So, C.-K.3    Wang, S.4    Wang, P.5    Yan, L.6    Myers, R.7    Chen, Z.8    Patterson, A.P.9    Yang, C.S.10    Chen, X.11
  • 6
    • 64549114508 scopus 로고    scopus 로고
    • Establishment of intestinal identity and epithelial-mesenchymal signaling by Cdx2
    • Gao N, White P, Kaestner KH (2009) Establishment of intestinal identity and epithelial-mesenchymal signaling by Cdx2. Dev Cell 16:588-599.
    • (2009) Dev Cell , vol.16 , pp. 588-599
    • Gao, N.1    White, P.2    Kaestner, K.H.3
  • 7
    • 0035833319 scopus 로고    scopus 로고
    • Expression of the gut-enriched Krüppel-like factor (Krüppel-like factor 4) gene in the human colon cancer cell line RKO is dependent on CDX2
    • DOI 10.1038/sj.onc.1204645
    • Dang DT, Mahatan CS, Dang LH, Agboola IA, Yang VW (2001) Expression of the gutenriched Krüppel-like factor (Krüppel-like factor 4) gene in the human colon cancer cell line RKO is dependent on CDX2. Oncogene 20:4884-4890. (Pubitemid 32803159)
    • (2001) Oncogene , vol.20 , Issue.35 , pp. 4884-4890
    • Dang, D.T.1    Mahatan, C.S.2    Dang, L.H.3    Agboola, I.A.4    Yang, V.W.5
  • 8
    • 0033982892 scopus 로고    scopus 로고
    • The homeodomain protein Cdx2 regulates lactase gene promoter activity during enterocyte differentiation
    • Fang R, Santiago NA, Olds LC, Sibley E (2000) The homeodomain protein Cdx2 regulates lactase gene promoter activity during enterocyte differentiation. Gastroenterology 118:115-127. (Pubitemid 30020379)
    • (2000) Gastroenterology , vol.118 , Issue.1 , pp. 115-127
    • Fang, R.1    Santiago, N.A.2    Olds, L.C.3    Sibley, E.4
  • 9
    • 0036829210 scopus 로고    scopus 로고
    • CDX2 regulates liver intestine-cadherin expression in normal and malignant colon epithelium and intestinal metaplasia
    • Hinoi T, et al. (2002) CDX2 regulates liver intestine-cadherin expression in normal and malignant colon epithelium and intestinal metaplasia. Gastroenterology 123: 1565-1577. (Pubitemid 35231656)
    • (2002) Gastroenterology , vol.123 , Issue.5 , pp. 1565-1577
    • Hinoi, T.1    Lucas, P.C.2    Kuick, R.3    Hanash, S.4    Cho, K.R.5    Fearon, E.R.6
  • 10
    • 0034234529 scopus 로고    scopus 로고
    • Intestine-specific activity of the human guanylyl cyclase C promoter is regulated by Cdx2
    • Park J, Schulz S, Waldman SA (2000) Intestine-specific activity of the human guanylyl cyclase C promoter is regulated by Cdx2. Gastroenterology 119:89-96. (Pubitemid 30452582)
    • (2000) Gastroenterology , vol.119 , Issue.1 , pp. 89-96
    • Park, J.1    Schulz, S.2    Waldman, S.A.3
  • 11
    • 33746808398 scopus 로고    scopus 로고
    • Wnt/beta-catenin signaling in development and disease
    • Clevers H (2006) Wnt/beta-catenin signaling in development and disease. Cell 127: 469-480.
    • (2006) Cell , vol.127 , pp. 469-480
    • Clevers, H.1
  • 13
    • 35848942606 scopus 로고    scopus 로고
    • Transcriptional modulation of genes encoding structural characteristics of differentiating enterocytes during development of a polarized epithelium in vitro
    • Halbleib JM, Sääf AM, Brown PO, Nelson WJ (2007) Transcriptional modulation of genes encoding structural characteristics of differentiating enterocytes during development of a polarized epithelium in vitro. Mol Biol Cell 18:4261-4278.
    • (2007) Mol Biol Cell , vol.18 , pp. 4261-4278
    • Halbleib, J.M.1    Sääf, A.M.2    Brown, P.O.3    Nelson, W.J.4
  • 14
    • 42649117164 scopus 로고    scopus 로고
    • Differential regulation of CDX1 and CDX2 gene expression by deficiency in methyl group donors
    • Lu X, et al. (2008) Differential regulation of CDX1 and CDX2 gene expression by deficiency in methyl group donors. Biochimie 90:697-704.
    • (2008) Biochimie , vol.90 , pp. 697-704
    • Lu, X.1
  • 15
    • 33747587864 scopus 로고    scopus 로고
    • Model-based analysis of tiling-arrays for ChIP-chip
    • Johnson WE, et al. (2006) Model-based analysis of tiling-arrays for ChIP-chip. Proc Natl Acad Sci USA 103:12457-12462.
    • (2006) Proc Natl Acad Sci USA , vol.103 , pp. 12457-12462
    • Johnson, W.E.1
  • 18
    • 33947219859 scopus 로고    scopus 로고
    • The functional landscape of mouse gene expression
    • Zhang W, et al. (2004) The functional landscape of mouse gene expression. J Biol 3:20.
    • (2004) J Biol , vol.3 , pp. 20
    • Zhang, W.1
  • 19
    • 45449115390 scopus 로고    scopus 로고
    • Variation in homeodomain DNA binding revealed by highresolution analysis of sequence preferences
    • Berger MF, et al. (2008) Variation in homeodomain DNA binding revealed by highresolution analysis of sequence preferences. Cell 133:1266-1276.
    • (2008) Cell , vol.133 , pp. 1266-1276
    • Berger, M.F.1
  • 20
    • 43349107222 scopus 로고    scopus 로고
    • A systematic characterization of factors that regulate Drosophila segmentation via a bacterial one-hybrid system
    • Noyes MB, et al. (2008) A systematic characterization of factors that regulate Drosophila segmentation via a bacterial one-hybrid system. Nucleic Acids Res 36: 2547-2560.
    • (2008) Nucleic Acids Res , vol.36 , pp. 2547-2560
    • Noyes, M.B.1
  • 21
    • 33747836850 scopus 로고    scopus 로고
    • CEAS: Cis-regulatory element annotation system
    • DOI 10.1093/nar/gkl322
    • Ji X, Li W, Song J, Wei L, Liu XS (2006) CEAS: cis-regulatory element annotation system. Nucleic Acids Res 34 (Web Server issue):W551-W554. (Pubitemid 44529830)
    • (2006) Nucleic Acids Research , vol.34 , Issue.WEB. SERV. ISS
    • Ji, X.1    Li, W.2    Song, J.3    Wei, L.4    Liu, X.S.5
  • 22
  • 24
    • 0037200071 scopus 로고    scopus 로고
    • Hepatocyte nuclear factor-1 alpha, GATA-4, and caudal related homeodomain protein Cdx2 interact functionally to modulate intestinal gene transcription. Implication for the developmental regulation of the sucrase-isomaltase gene
    • Boudreau F, et al. (2002) Hepatocyte nuclear factor-1 alpha, GATA-4, and caudal related homeodomain protein Cdx2 interact functionally to modulate intestinal gene transcription. Implication for the developmental regulation of the sucrase-isomaltase gene. J Biol Chem 277:31909-31917.
    • (2002) J Biol Chem , vol.277 , pp. 31909-31917
    • Boudreau, F.1
  • 25
    • 34547940716 scopus 로고    scopus 로고
    • The human mucin MUC4 is transcriptionally regulated by caudal-related homeobox, hepatocyte nuclear factors, forkhead box A, and GATA endodermal transcription factors in epithelial cancer cells
    • Jonckheere N, et al. (2007) The human mucin MUC4 is transcriptionally regulated by caudal-related homeobox, hepatocyte nuclear factors, forkhead box A, and GATA endodermal transcription factors in epithelial cancer cells. J Biol Chem 282: 22638-22650.
    • (2007) J Biol Chem , vol.282 , pp. 22638-22650
    • Jonckheere, N.1
  • 27
    • 42149183576 scopus 로고    scopus 로고
    • Genome-wide pattern of TCF7L2/TCF4 chromatin occupancy in colorectal cancer cells
    • Hatzis P, et al. (2008) Genome-wide pattern of TCF7L2/TCF4 chromatin occupancy in colorectal cancer cells. Mol Cell Biol 28:2732-2744.
    • (2008) Mol Cell Biol , vol.28 , pp. 2732-2744
    • Hatzis, P.1
  • 28
    • 68149180901 scopus 로고    scopus 로고
    • The 8q24 cancer risk variant rs6983267 shows long-range interaction with MYC in colorectal cancer
    • PomerantzMM, et al. (2009) The 8q24 cancer risk variant rs6983267 shows long-range interaction with MYC in colorectal cancer. Nat Genet 41:882-884.
    • (2009) Nat Genet , vol.41 , pp. 882-884
    • Pomerantz, M.M.1
  • 29
    • 68149170044 scopus 로고    scopus 로고
    • The common colorectal cancer predisposition SNP rs6983267 at chromosome 8q24 confers potential to enhanced Wnt signaling
    • Tuupanen S, et al. (2009) The common colorectal cancer predisposition SNP rs6983267 at chromosome 8q24 confers potential to enhanced Wnt signaling. Nat Genet 41: 885-890.
    • (2009) Nat Genet , vol.41 , pp. 885-890
    • Tuupanen, S.1
  • 30
    • 77749323471 scopus 로고    scopus 로고
    • Upregulation of c-MYC in cis through a large chromatin loop linked to a cancer risk-associated single-nucleotide polymorphism in colorectal cancer cells
    • Wright JB, Brown SJ, Cole MD (2010) Upregulation of c-MYC in cis through a large chromatin loop linked to a cancer risk-associated single-nucleotide polymorphism in colorectal cancer cells. Mol Cell Biol 30:1411-1420.
    • (2010) Mol Cell Biol , vol.30 , pp. 1411-1420
    • Wright, J.B.1    Brown, S.J.2    Cole, M.D.3
  • 31
    • 33645743572 scopus 로고    scopus 로고
    • CDX2 has tumorigenic potential in the human colon cancer cell lines LOVO and SW48
    • Dang LH, et al. (2006) CDX2 has tumorigenic potential in the human colon cancer cell lines LOVO and SW48. Oncogene 25:2264-2272.
    • (2006) Oncogene , vol.25 , pp. 2264-2272
    • Dang, L.H.1
  • 33
    • 0032521433 scopus 로고    scopus 로고
    • Mutational analysis of the APC/beta-catenin/Tcf pathway in colorectal cancer
    • Sparks AB, Morin PJ, Vogelstein B, Kinzler KW (1998) Mutational analysis of the APC/beta-catenin/Tcf pathway in colorectal cancer. Cancer Res 58:1130-1134.
    • (1998) Cancer Res , vol.58 , pp. 1130-1134
    • Sparks, A.B.1    Morin, P.J.2    Vogelstein, B.3    Kinzler, K.W.4
  • 34
    • 0344826531 scopus 로고    scopus 로고
    • +/- compound mutant mice
    • DOI 10.1038/ng1265
    • Aoki K, Tamai Y, Horiike S, Oshima M, Taketo MM (2003) Colonic polyposis caused by mTOR-mediated chromosomal instability in Apc+/Delta716 Cdx2+/- compound mutant mice. Nat Genet 35:323-330. (Pubitemid 37486915)
    • (2003) Nature Genetics , vol.35 , Issue.4 , pp. 323-330
    • Aoki, K.1    Tamai, Y.2    Horiike, S.3    Oshima, M.4    Taketo, M.M.5
  • 35
    • 16244388032 scopus 로고    scopus 로고
    • The role of Cdx proteins in intestinal development and cancer
    • Guo RJ, Suh ER, Lynch JP (2004) The role of Cdx proteins in intestinal development and cancer. Cancer Biol Ther 3:593-601. (Pubitemid 41351093)
    • (2004) Cancer Biology and Therapy , vol.3 , Issue.7 , pp. 593-601
    • Guo, R.-J.1    Eun, R.S.2    Lynch, J.P.3
  • 36
    • 2442504557 scopus 로고    scopus 로고
    • -/- embryos
    • DOI 10.1038/sj.emboj.7600191
    • Gregorieff A, Grosschedl R, Clevers H (2004) Hindgut defects and transformation of the gastro-intestinal tract in Tcf4(-/-)/Tcf1(-/-) embryos. EMBO J 23:1825-1833. (Pubitemid 38649645)
    • (2004) EMBO Journal , vol.23 , Issue.8 , pp. 1825-1833
    • Gregorieff, A.1    Grosschedl, R.2    Clevers, H.3
  • 39
    • 22344457014 scopus 로고    scopus 로고
    • enoLOGOS: A versatile web tool for energy normalized sequence logos
    • Workman CT, et al. (2005) enoLOGOS: A versatile web tool for energy normalized sequence logos. Nucleic Acids Res 33 (Web Server issue):W389-W392.
    • (2005) Nucleic Acids Res , vol.33 , Issue.WEB. SERV. ISS
    • Workman, C.T.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.