Species differentiation and gene flow in the Blackbutts (genus Eucalyptus subgenus Eucalyptus section Pseudophloius)

Conservation Genetics

Volumn 11, Issue 5, 2010, Pages 1965-1978

  Shepherd, Mervyn ^a   Raymond, Carolyn ^a  

^a SOUTHERN CROSS UNIVERSITY   (Australia)

Author keywords

Adaptation; Ecotypes; Microsatellites markers; Pilularis; Pyrocarpa; Reproductive morphology

Indexed keywords

ADAPTATION; BAYESIAN ANALYSIS; ECOTYPE; ENVIRONMENTAL FACTOR; EVERGREEN TREE; GENE FLOW; GENETIC ANALYSIS; GENETIC DIFFERENTIATION; GENETIC MARKER; GENETIC STRUCTURE; PHENOTYPE; REPRODUCTIVE BIOLOGY; TAXONOMY;

EUCALYPTUS; EUCALYPTUS PILULARIS;

EID: 77956884230     PISSN: 15660621     EISSN: 15729737     Source Type: Journal    
DOI: 10.1007/s10592-010-0086-8     Document Type: Article

References (57)

1. Allendorf FW, Luikart G (2007) Conservation and the genetics of populations. Blackwell, Malden.
2. st: fish, allozymes and the Lewontin-Krakauer test revisited. Genetics 152: 653-659.
3. Barbour RC, Crawford AC, Henson M, Lee DJ, Shepherd M, Potts BM (2008) The risk of pollen-mediated gene flow from exotic Corymbia plantations into native Corymbia populations in Australia. For Ecol Manag 256: 1-19.
4. Baur GN (1983) Notes on the silviculture of the major forest types of New South Wales. Forest types 4. Blackbutt types. Forestry Commission New South Wales, Sydney, p 60.
5. Beadle NCW (1966) Soil phosphate and its role in molding segments of the Australian flora and vegetation, with special reference to xeromorphy and sclerophylly. Ecology 47: 992-1007.
6. Brondani RPV, Williams ER, Brondani C, Grattapaglia D (2006) A microsatellite-based consensus linkage map for species of Eucalyptus and a novel set of 230 microsatellite markers for the genus. BMC Plant Biol 6: 1-16.
7. Brooker MIH (2000) A new classification of the genus Eucalyptus L'Her. (Myrtaceae). Aust Syst Bot 13: 79-148.
8. Burgess IP (1975) A provenance trial with Blackbutt: 9-year results. Aust For Res 7: 1-9.
9. Butlin RK, Galindo J, Grahame JW (2008) Sympatric, parapatric or allopatric: the most important way to classify speciation? Philos Trans R Soc Lond B Biol Sci 363: 2997-3007. doi: 10. 1098/rstb. 2008. 0076.
10. CPBR (2006) Euclid: eucalypts of Australia. CSIRO Publishing, Canberra.
11. Evanno G, Regnaut S, Goudet J (2005) Detecting the number of clusters of individuals using the software Structure: a simulation study. Mol Ecol 14: 2611-2620.
12. Excoffier L, Smouse PE, Quattro JM (1992) Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data. Genetics 131: 479-491.
13. Florence RG (1964) A comparative study of flowering and seed production in six Blackbutt (Eucalyptus pilularis Sm) forest stands. Aust For 28: 23-33.
14. Florence RG (1968) The role of Blackbutt in East Coast Forests. Aust For 32: 118-127.
15. Florence RG (1969) Variation in Blackbutt. Aust For 33: 83-93.
16. Fonseca CR, McC. Overton J, Collins B, Westoby M (2000) Shifts in trait-combinations along rainfall and phosphorus gradients. J Ecol 88: 964-977.
17. Gore PL, Potts BM, Volker PW, Megalos J (1990) Unilateral cross-incompatibility in Eucalyptus: the case of hybridisation between E. globulus and E. nitens. Aust J Bot 38: 383-394.
18. Goudet J (2001) FSTAT, a program to estimate and test gene diversities and fixation indices (version 2. 9. 3). Available from http://www. unil. ch/izea/softwares/fstat. html. Accessed 8 Dec 2008.
19. Grattapaglia D, Kirst M (2008) Eucalyptus applied genomics: from gene sequences to breeding tools. New Phytol 179: 911-929.
20. Henson M, Smith HJ (2007) Achievements in forest tree genetic improvement in Australia and New Zealand. 1. Eucalyptus pilularis Smith tree improvement in Australia. Aust For 70: 4-10.
21. House SM (1997) Reproductive biology of eucalypts. In: Williams JE, Woinarski JCZ (eds) Eucalypt ecology: individuals to ecosystems. Cambridge University Press, Cambridge.
22. Johnson LAS (1976) Problems of species and genera in Eucalyptus (Myrtaceae). Plant Syst Evol 125: 155-167.
23. Jones R (2009) Molecular evolution and genetic control of flowering in the Eucalyptus globulus species complex. Dissertation, University of Tasmania.
24. Jordan GJ, Dillon RA, Weston PH (2005) Solar radiation as a factor in the evolution of scleromorphic leaf anatomy in Proteaceae. Am J Bot 92: 789-796. doi: 10. 3732/ajb. 92. 5. 789.
25. Keith DA (2006) From ocean shores to desert dunes: the vegetation of New South Wales and the ACT. Department of Environment and Conservation NSW, Hurtsville.
26. Ladiges PY (1997) Phylogenetic history and classification of eucalypts. In: Williams JE, Woinarski JCZ (eds) Eucalypt ecology: individuals to ecosystems. Cambridge University Press, Cambridge.
27. Law B, Mackowski C, Schoer L, Tweedie T (2000) Flowering phenology of myrtaceous trees and their relation to climatic, environmental and disturbance variables in northern New South Wales. Austral Ecol 25: 160-178.
28. Lewontin RC, Krakauer J (1973) Distribution of gene frequency as a test of the theory of the selective neutrality of polymorphisms. Genetics 74: 175-195.
29. Li P, Adams WT (1989) Range-wide patterns of allozyme variation in Douglas-fir (Pseudotsuga menziesii). Can J For Res 19: 149-161.
30. McKay JK, Christian CE, Harrison S, Rice KJ (2005) "How local is local?"; A review of practical and conceptual issues in the genetics of restoration. Restor Ecol 13: 432-440. doi: 10. 1111/j. 1526-100X. 2005. 00058. x.
31. McKinnon GE, Vaillancourt RE, Jackson HD, Potts BM (2001) Chloroplast sharing in the Tasmanian eucalypts. Evolution 55: 703-711.
32. Morand DT (2001) Soil landscapes of the Woodburn region 1: 100 000 report and map. Department of Land and Water Conservation, Sydney.
33. Muir G, Schlotterer C (2005) Evidence for shared ancestal polymorphism rather than recurrent gene flow at microsatellite loci differentiating two hybridizing oaks (Quercus spp.). Mol Ecol 14: 549-561.
34. Nei M, Tajima F, Tateno Y (1983) Accuracy of estimated phylogenetic trees from molecular data II. Gene frequency data. J Mol Evol 19: 153-170.
35. Panova M, Hollander J, Johannesson K (2006) Site-specific genetic divergence in parallel hybrid zones suggests nonallopatric evolution of reproductive barriers. Mol Ecol 15: 4021-4031.
36. Payne RW, Harding SA, Murray DA, Soutar DM, Baird DB, Glaser AI, Channing IC, Welham SJ, Gilmour AR, Thompson R, Webster R (2008) The guide to GenStat release 11, Part 2: Statistics. VSN International, Hemel Hempstead.
37. Peakall R, Smouse PE (2006) GENALEX 6: genetic analysis in Excel. Population genetic software for teaching and research. Mol Ecol Notes 6: 288-295.
38. Potts BM, Dungey H (2004) Interspecific hybridisation of Eucalyptus: key issues for tree breeders and geneticists. New For 27: 115-138.
39. Potts BM, Jackson WD (1986) Evolutionary processes in the Tasmanian high altitude eucalypts. In: Barlow BA (ed) Flora and fauna of alpine Australasia. Ages and origins. CSIRO, Melbourne.
40. Potts BM, Wiltshire RJE (1997) Eucalypt genetics and genecology. In: Williams J, Woinarski J (eds) Eucalypt ecology: individuals to ecosystems, 1st edn. Cambridge University Press, Cambridge.
41. Potts BM, Barbour RC, Hingston AB, Vaillancourt RE (2003) Genetic pollution of native eucalypt gene pools-identifying the risks. Aust J Bot 51: 1-25.
42. Pritchard PCH (1999) Status of the black turtle. Conserv Biol 13: 1000-1003.
43. Pritchard JK, Stephens M, Donnelly P (2000) Inference of population structure using multilocus genotype data. Genetics 155: 945-959.
44. Pryor LD (1957) Variation in Snow Gum (Eucalyptus pauciflora. Sieb.). Proc Linnean Soc NSW 81: 299-305.
45. Pryor LD, Johnson LAS (1971) A classification of the eucalypts. Australian National University Press, Canberra.
46. Ridley M (2004) Speciation. Evolution, 3rd edn. Blackwell, Malden.
47. Rieseberg LH, Burke JM (2001) The biological reality of species: gene flow, selection, and collective evolution. Taxon 50: 47-67.
48. Sampson JF, Byrne M (2008) Outcrossing between an agroforestry plantation and remnant native populations of Eucalyptus loxophleba. Mol Ecol 17: 2769-2781. doi: 10. 1111/j. 1365-294X. 2008. 03779. x.
49. Sexton TR, Henry R, McManus LJ, Bowen S, Shepherd M (2010) Capture of assay template by multiplex PCR of long amplicons for genotyping SNPs and InDels with MALDI-TOF mass spectrometry. Mol Breed 25: 471-480. doi: 10. 1007/s11032-009-9345-0.
50. Shepherd M, Kasem S, Lee D, Henry R (2006) Construction of microsatellite linkage maps for Corymbia. Silvae Genet 55: 228-238.
51. Shepherd M, Sexton TR, Thomas D, Henson M, Henry RJ (2010) Geographical and historical determinants of microsatellite variation in Eucalyptus pilularis (Section Pseudophloius). Can J For Res 40.
52. Storfer A (1999) Gene flow and endangered species translocations: a topic revisited. Biol Conserv 87: 173-180.
53. Tamura K, Dudley J, Nei M, Kumar S (2007) MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4. 0. Mol Biol Evol 24: 1596-1599.
54. Vaha J-P, Primmer CR (2006) Efficiency of model-based Bayesian methods for detecting hybrid individuals under different hybridisation scenarios and with different numbers of loci. Mol Ecol 15: 63-72.
55. White TL, Adams WT, Neale DB (2007) Geographic variation. In: Forest genetics. CABI Publishing, Cambridge.
56. Wu CI (2001) The genic view of the process of speciation. J Evol Biol 14: 851-865.
57. Wu CI, Ting CT (2004) Genes and speciation. Nat Rev Genet 5: 114-122.