Identification of sequence polymorphism in the D-Loop region of mitochondrial DNA as a risk factor for hepatocellular carcinoma with distinct etiology

Journal of Experimental and Clinical Cancer Research

Volumn 29, Issue 1, 2010, Pages

  Zhang, Ruixing ^a   Zhang, Fengbin ^a   Wang, Cuiju ^a   Wang, Shunxiang ^a   Shiao, Yih Horng ^b   Guo, Zhanjun ^a  

^a HEBEI MEDICAL UNIVERSITY   (China)

^b NATIONAL CANCER INSTITUTE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

MITOCHONDRIAL DNA;

ADULT; ALLELE; ARTICLE; BLOOD; CANCER RISK; CANCER STAGING; CLINICAL ARTICLE; COMPARATIVE STUDY; CONTROL GROUP; CONTROLLED STUDY; FEMALE; GENE MUTATION; GENE SEQUENCE; GENETIC ASSOCIATION; GENETIC IDENTIFICATION; GENETIC POLYMORPHISM; HAPLOTYPE; HEPATITIS B VIRUS; HUMAN; HUMAN TISSUE; LIVER CELL CARCINOMA; MALE; NUCLEOTIDE SEQUENCE; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; PROMOTER REGION; RISK FACTOR; SINGLE NUCLEOTIDE POLYMORPHISM; AGED; ALCOHOL LIVER DISEASE; CASE CONTROL STUDY; CHI SQUARE DISTRIBUTION; CHINA; CONFORMATION; GENE FREQUENCY; GENE LINKAGE DISEQUILIBRIUM; GENETIC PREDISPOSITION; GENETICS; HEPATITIS B; LIVER TUMOR; MIDDLE AGED; MOLECULAR GENETICS; PATHOLOGY; PHENOTYPE; RISK ASSESSMENT;

ADULT; AGED; BASE SEQUENCE; CARCINOMA, HEPATOCELLULAR; CASE-CONTROL STUDIES; CHI-SQUARE DISTRIBUTION; CHINA; DNA, MITOCHONDRIAL; FEMALE; GENE FREQUENCY; GENETIC PREDISPOSITION TO DISEASE; HAPLOTYPES; HEPATITIS B; HUMANS; LINKAGE DISEQUILIBRIUM; LIVER DISEASES, ALCOHOLIC; LIVER NEOPLASMS; MALE; MIDDLE AGED; MOLECULAR SEQUENCE DATA; NEOPLASM STAGING; NUCLEIC ACID CONFORMATION; PHENOTYPE; POLYMORPHISM, SINGLE NUCLEOTIDE; RISK ASSESSMENT; RISK FACTORS;

EID: 77956580766     PISSN: None     EISSN: 17569966     Source Type: Journal    
DOI: 10.1186/1756-9966-29-130     Document Type: Article

References (30)

1. Hepatocellular carcinoma: Epidemiology, risk factors and pathogenesis. AI Gomaa SA Khan MB Toledano I Waked SD Taylor-Robinson, World J Gastroenterol 2008 14 4300 4308 10.3748/wjg.14.4300 18666317
2. Prevention and control of hepatitis B in China. Z Sun L Ming X Zhu J Lu, J Med Virol 2002 67 447 450 10.1002/jmv.10094 12116043
3. Globocan 2000: Cancer incidence, mortality and prevalence worldwide, version 1.0. J Ferlay F Bray P Pisani DM Parkin, IARC Cancer Base No.5 Lyon, France: IARC Press 2001
4. The epidemiology of hepatocellular cancer: from the perspectives of public health problem to tumor biology. S Caldwell SH Park, J Gastroenterol 2009 44 96 101 10.1007/s00535-008-2258-6 19148801
5. Management of hepatitis B in China. FM Lu H Zhuang, Chin Med J 2009 122 3 4 19187608
6. Drug addition in China. L Lu X Wang, Ann NY Acad Sci 2008 1141 304 317 10.1196/annals.1441.025 18991965
7. Oxidative stress during viral infection: a review. KB Schwarz, Free Radical Biol Med 1996 21 641 649 10.1016/0891-5849(96)00131-1 (Pubitemid 26331094)
8. Multiple hepatic mitochondrial DNA deletions suggest premature oxidative aging in alcoholic patients. A Mansouri B Fromenty A Berson MA Robin S Grimbert M Beaugrand S Erlingr D Pessayre, J Hepatol 1997 27 96 102 10.1016/S0168- 8278(97)80286-3 9252080
9. Mitochondrial DNA maintenance in vertebrates. GS Shadel DA Clayton, Annu Rev Biochem 1997 66 409 435 10.1146/annurev.biochem.66.1.409 9242913
10. Mitochondrial DNA mutations in human disease. S DiMauro EA Schon, Am J Med Genet 2001 106 18 26 10.1002/ajmg.1392 11579421
11. Mitochondia, free radicals, and neurodegeneration. MF Beal, Curr Opin Neurobiol 1996 6 661 666 10.1016/S0959-4388(96)80100-0 8937831
12. Mammalian mitochondrial genetics: heredity, heteroplasmy and disease. RN Lightowlers PF Chinnery DM Turnbull N Howell, Trends Genet 1997 13 450 455 10.1016/S0168-9525(97)01266-3 9385842
13. Mouse models for mitochondrial disease. DC Wallace, Am J Med Genet 2001 106 71 93 10.1002/ajmg.1393 11579427
14. Facile detection of mitochondrial DNA mutations in tumors and bodily fluids. MS Fliss H Usadel OL Caballero L Wu MR Buta SM Eleff J Jen D Sidransky, Science 2000 287 2017 2019 10.1126/science.287.5460.2017 10720328
15. Mitochondrial D-loop mutation as clonal markers in multicentric hepatocellular carcimona and plasma. S Nomoto K Yamashita K Koshikawa A Nakao D Sidransky, Clin Cancer Res 2002 8 481 487 11839667
16. Electrophile and oxidant damage of mitochondrial DNA leading to rapid evolution of homoplasmic mutations. E Mambo X Gao Y Cohen Z Guo P Talalay D Sidransky, Proc Natl Acad Sci USA 2003 100 1838 1843 10.1073/pnas.0437910100 12578990
17. Nucleotide sequence variation is frequently in the mitochondrial DNA displacement loop region of individual human tumor cells. H Yoneyama T Hara Y Kato T Yamori ET Matsuura K Koike, Mol Cancer Res 2005 3 14 20 15671245
18. Performance of mitochondrial DNA mutations detecting early stage cancer. JP Jakupciak S Maragh ME Markowitz AK Greenberg MO Hoque A Maitra PE Barker PD Wagner WN Rom S Srivastava D Sidransky CD O'Connell, BMC Cancer 2008 8 285 10.1186/1471-2407-8-285 18834532
19. Somatic mutation of mitochondrial DNA in cancerous and noncancerous liver tissue in individuals with hepatocellular carcinoma. M Nashikawa S Nishiguchi S Shiomi A Tamori N Koh T Takeda S Kubo K Hirohashi H Kinoshita E Sato M Inoue, Cancer Res 2001 61 1843 1845 11280735
20. Identification of a mononucleotide repeat as a major target for mitochondrial DNA alterations in human tumors. M Sanchez-Cespedes P Parrella S Nomoto D Cohen Y Xiao M Esteller C Jeronimo RC Jordan T Nicol WM Koch M Schoenberg P Mazzarelli VM Fazio D Sidransky, Cancer Res 2001 61 7015 7019 11585726
21. The mitochondrial genome: structure, transcription, translation and replication. JW Taanman, Biochim Biophys Acta 1999 1410 103 123 10.1016/S0005-2728(98)00161-3 10076021
22. Increased production of reactive oxygen species by rat liver mitochondria after chronic ethanol treatment. E Kukielka E Dicker AI Cederbaum, Arch Biochem Biophys 1994 309 377 386 10.1006/abbi.1994.1127 8135551
23. Mitochondrial DNA D-loop in pancreatic cancer: somatic mutations are epiphenomena while the germline 16519 T variant worsens metabolism and outcome. F Navaglia D Basso P Fogar C Sperti E Greco CF Zambon A Stranges A Falda S Pizzi A Parenti S Pedrazzoli M Plebani, Am J Clin Pathol 2006 126 593 601 10.1309/GQFCCJMH5KHNVX73 16938655
24. Mitochondrial genetic polymorphisms and pancreatic cancer risk. L Wang WR Bamlet M de Andrade LA Boardman JM Cunningham SN Thibodeau GM Petersen, Cancer Epidemiol Biomarkers Prev 2007 16 1455 1459 10.1158/1055-9965.EPI-06-0367 17627010
25. Polymorphisms in mitochondrial genes and prostate cancer risk. L Wang SK McDonnell SJ Hebbring JM Cunningham J St Sauver JR Cerhan G Isaya DJ Schaid SN Thibodeau, Cancer Epidemiol Biomarkers Prev 2008 17 3558 3566 10.1158/1055-9965.EPI-08-0434 19064571
26. Mitochondrial genetic background modifies breast cancer risk. RK Bai SM Leal D Covarrubias A Liu LJ Wong, Cancer Res 2007 67 4687 4694 10.1158/0008-5472.CAN-06-3554 17510395
27. Somatic mutations in the D-loop and decrease in the copy number of mitochondrial DNA in human hepatocellular carcinoma. HC Lee SH Li JC Lin CC Wu DC Yeh YH Wei, Mutat Res 2004 547 71 78 15013701
28. Nuclear HMGA1 nonhistone chromatin proteins directly influence mitochondrial transcription, maintenance, and function. GA Dement SC Maloney R Reeves, Exp Cell Res 2007 313 77 87 10.1016/j.yexcr.2006.09.014 17045586
29. A persistent RNA-DNA hybrid is formed during transcription at a phylogenetically conserved mitochondrial DNA sequence. B Xu DA Clayton, Mol Cell Bil 1995 15 580 589
30. Initiation of mitochondrial DNA replication by transcription and R-loop processing. DY Lee DA Clayton, J Biol Chem 1998 46 30614 30621 10.1074/jbc.273.46.30614 (Pubitemid 28545540)