Modeling acclimation of photosynthesis to temperature in evergreen conifer forests

New Phytologist

Volumn 188, Issue 1, 2010, Pages 175-186

  Gea Izquierdo, Guillermo ^a   Mäkelä, Annikki ^b   Margolis, Hank ^c   Bergeron, Yves ^d   Black, T Andrew ^e   Dunn, Allison ^f   Hadley, Julian ^g   Paw U, Kyaw Tha ^h   Falk, Matthias ^h   Wharton, Sonia ⁿ   Monson, Russell ⁱ   Hollinger, David Y ^j   Laurila, Tuomas ^k   Aurela, Mika ^k   McCaughey, Harry ^l   Bourque, Charles ^m   Vesala, Timo ^b   Berninger, Frank ^a  

^a UNIVERSITÉ DU QUÉBEC À MONTRÉAL   (Canada)

^b UNIVERSITY OF HELSINKI   (Finland)

^c UNIVERSITÉ LAVAL   (Canada)

^d UNIVERSITÉ DU QUÉBEC EN ABITIBI TÉMISCAMINGUE   (Canada)

^e UNIVERSITY OF BRITISH COLUMBIA   (Canada)

^f HARVARD UNIVERSITY   (United States)

^g HARVARD UNIVERSITY   (United States)

^h UNIVERSITY OF CALIFORNIA   (United States)

ⁱ UNIVERSITY OF COLORADO   (United States)

^j USDA FOREST SERVICE   (United States)

^k FINNISH METEOROLOGICAL INSTITUTE   (Finland)

^l QUEEN S UNIVERSITY   (Canada)

^m UNIVERSITY OF NEW BRUNSWICK   (Canada)

ⁿ LAWRENCE LIVERMORE NATIONAL LABORATORY   (United States)

more..

Author keywords

Boreal ecosystems; Carbon fluxes; Eddy covariance; Mechanistic models; Temperature acclimation

Indexed keywords

ACCLIMATION; AIR TEMPERATURE; ALGORITHM; CARBON FLUX; CONIFEROUS FOREST; EDDY COVARIANCE; EVERGREEN FOREST; NET ECOSYSTEM EXCHANGE; NUMERICAL MODEL; PHOTOSYNTHESIS; TEMPERATE ENVIRONMENT; TEMPERATURE EFFECT;

ACCLIMATIZATION; ARTICLE; BIOLOGICAL MODEL; CONIFER; PHOTOSYNTHESIS; PHYSIOLOGY; SEASON; TEMPERATURE; TIME; TREE;

ACCLIMATIZATION; CONIFEROPHYTA; MODELS, BIOLOGICAL; PHOTOSYNTHESIS; SEASONS; TEMPERATURE; TIME FACTORS; TREES;

CONIFEROPHYTA;

EID: 77956286996     PISSN: 0028646X     EISSN: 14698137     Source Type: Journal    
DOI: 10.1111/j.1469-8137.2010.03367.x     Document Type: Article

References (60)

1. Aurela M. Carbon dioxide exchange in subarctic ecosystems measured by a micrometeorological technique 2005, http://ethesis.helsinki.fi/julkaisut/mat/fysik/vk/aurela/, PhD thesis, Finnish Meteorological Institute Contributions, URL [last accessed 6 July 2010]
2. Baldocchi DD. Assessing the eddy covariance technique for evaluating carbon dioxide exchange rates of ecosystems: past, present and future. Global Change Biology 2003, 9:479-492.
3. Baldocchi DD, Black TA, Curtis PS, Falge E, Fuentes JD, Granier A, Gu L, Knohl A, Pilegaard K, Schmid HP. Predicting the onset of net carbon uptake by deciduous forests with soil temperature and climate data: a synthesis of FLUXNET data. International Journal of Biometeorology 2005, 49:377-387.
4. Bergeron O, Margolis HA, Black TA, Coursolle C, Dunn AL, Barr AG, Wofsy SC. Comparison of carbon dioxide fluxes over three boreal black spruce forests in Canada. Global Change Biology 2007, 13:89-107.
5. Bergh J, Linder S. Effects of soil warming during spring on photosynthetic recovery in boreal Norway spruce stands. Global Change Biology 1999, 5:245-253.
6. Berninger F. Effects of drought and phenology on GPP in Pinus sylvestris: a simulation study along a geographical gradient. Functional Ecology 1997, 11:33-42.
7. Berninger F, Hari P. Optimal regulation of gas exchange evidence from field data. Annals of Botany 1993, 71:135-140.
8. Berninger F, Makela A, Hari P. Optimal control of gas exchange during drought: empirical evidence. Annals of Botany 1996, 77:469-476.
9. Black TA, Gaumont-Guay D, Jassal RS, Amiro BD, Jarvis PG, Gower ST, Kelliher FM. Measurement of CO2 exchange between boreal forest and the atmosphere. The carbon balance of forest biomes 2005, 151-186. Griffiths H, Jarvis PJ, In, eds, New York, NY, USA, Taylor and Francis Group
10. Canham CD, Uriarte M. Analysis of neighborhood dynamics of forest ecosystems using likelihood methods and modeling. Ecological Applications 2006, 16:62-73.
11. D'Arrigo RD, Kaufmann RK, Davi N, Jacoby GC, Laskowski C, Myneni RB, Cherubini P. Thresholds for warming-induced growth decline at elevational tree line in the Yukon Territory, Canada. Global Biogeochemical Cycles 2004, 18. http://dx.doi.org/10.1029/2004GB002249, GB3021: doi:
12. Dunn AL, Barford CC, Wofsy SC, Goulden ML, Daube BC. A long-term record of carbon exchange in a boreal black spruce forest: means, responses to interannual variability, and decadal trends. Global Change Biology 2007, 13:577-590.
13. Ensminger I, Sveshnikov D, Campbell D, Funk C, Jansson S, Lloyd J, Shibistova O, Öquist G. Intermittent low temperatures constrain spring recovery of photosynthesis in boreal Scots pine forests. Global Change Biology 2004, 10:995-1008.
14. Falge E, Baldocchi D, Olson R, Anthoni P, Aubinet M, Bernhofer C, Burba G, Ceulemans R, Clement R, Dolman H. Gap filling strategies for defensible annual sums of net ecosystem exchange. Agricultural and Forest Meteorology 2001, 107:43-69.
15. Falk M, Paw U KT, Wharton S, Schroeder M. Is soil respiration a major contributor to the carbon budget within a Pacific Northwest old-growth forest? Agricultural and Forest Meteorology 2005, 135:269-283.
16. Falk M, Wharton S, Schroeder M, Ustin S, Paw U KT. Flux partitioning on an old growth forest. Tree Physiology 2008, 28:509-520.
17. Friend AD, Arneth A, Kiang NY, Lomas M, Ogee J, Rodenbeck C, Running SW, Santaren JD, Sitch S, Viovy N. FLUXNET and modelling the global carbon cycle. Global Change Biology 2007, 13:610-633.
18. Gamon JA, Field CB, Goulden ML, Griffin KL, Hartley AE, Joel G, Peñuelas J, Valentini R. Relationships between NDVI, canopy structure, and photosynthesis in three Californian vegetation types. Ecological Application 1995, 5:28-41.
19. Gea-Izquierdo G, Cañellas I. Analysis of holm oak intraspecific competition using Gamma regression. Forest Science 2009, 55:310-322.
20. Goulden ML, Winston GC, Mcmillan AVS, Litvak ME, Read EL, Rocha AV, Elliot JR. An eddy covariance mesonet to measure the effect of forest age on land-atmosphere exchange. Global Change Biology 2006, 12:2146-2162.
21. Hadley JL, Schedlbauer JL. Carbon exchange of an old-growth eastern hemlock (Tsuga canadensis) forest in central New England. Tree Physiology 2002, 22:1079-1092.
22. Hollinger DY, Aber J, Dail B, Davidson EA, Goltz SM, Hughes H, Leclerc MY, Lee JT, Richardson AD, Rodrigues C. Spatial and temporal variability in forest-atmosphere CO2 exchange. Global Change Biology 2004, 10:1689-1706.
23. Hollinger DY, Goltz SM, Davidson EA, Lee JT, Tu K, Valentine HT. Seasonal patterns and environmental control of carbon dioxide and water vapour exchange in an ecotonal boreal forest. Global Change Biology 1999, 5:891-902.
24. Howard EA, Gower ST, Foley JA, Kucharik CJ. Effects of logging on carbon dynamics of a jack pine forest in Saskatchewan, Canada. Global Change Biology 2004, 10:1267-1284.
25. Ilvesniemi H, Liu C. Biomass distribution in a young Scots pine stand. Boreal Environment Research 2001, 6:3-8.
26. Kolari P, Lappalainen HK, Hänninen H, Hari P. Relationship between temperature and the seasonal course of photosynthesis in Scots pine at northern timberline and in southern boreal zone. Tellus. Series B, Chemical and Physical Meteorology 2007, 59:542-552.
27. Krishnan P, Black TA, Jassal RS, Chen B, Nesic Z. Interannual variability of the carbon balance of three different-aged Douglas-fir stands in the Pacific Northwest. Journal of Geophysical Research 2009, http://dx.doi.org/10.1029/2008JG000912, doi:
28. Lindroth A, Lagergren F, Aurela M, Bjarnadottir B, Christensen T, Dellwik E, Grelle A, Ibrom A, Johansson T, Lankreijer H. Leaf area index is the principal scaling parameter for both gross photosynthesis and ecosystem respiration of Northern deciduous and coniferous forests. Tellus. Series B, Chemical and Physical Meteorology 2008, 60B:129-142.
29. Linkosalo T. Regularities and patterns in the spring phenology of some boreal trees. Silva Fennica 1999, 33:237-245.
30. Lloyd J, Taylor JA. On the temperature dependence of soil respiration. Functional Ecology 1994, 8:315-323.
31. Luyssaert S, Janssens IA, Sulkava M, Papale D, Dolman AJ, Reichstein M, Hollmen J, Martin JG, Suni T, Vesala T. Photosynthesis drives anomalies in net carbon-exchange of pine forests at different latitudes. Global Change Biology 2007, 13:2110-2127.
32. Mäkela A, Berninger F, Hari P. Optimal control of gas exchange during drought: theoretical analysis. Annals of Botany 1996, 77:461-467.
33. Mäkelä A, Hari P, Berninger F, Hänninen H, Nikinmaa E. Acclimation of photosynthetic capacity in Scots pine to the annual cycle of temperature. Tree Physiology 2004, 24:369-376.
34. Mäkelä A, Kolari P, Karimäki J, Nikinmaa E, Perämäki M, Hari P. Modelling five years of weather-driven variation of GPP in a boreal forest. Agricultural and Forest Meteorology 2006, 139:382-398.
35. Mäkelä A, Pulkkinen M, Kolari P, Lagergren F, Berbigier P, Lindroth A, Loustau D, Nikinmaa E, Vesala T, Hari P. Developing an empirical model of stand GPP with the LUE approach: analysis of eddy covariance data at five contrasting conifer sites in Europe. Global Change Biology 2008a, 14:92-108.
36. Mäkelä A, Valentine HT, Helmisaari HS. Optimal co-allocation of carbon and nitrogen in a forest stand at steady state. New Phytologist 2008b, 180:114-123.
37. Monson RK, Turnipseed AA, Sparks JP, Harley PC, Scott-Denton LE, Sparks K, Huxman TE. Carbon sequestration in a high-elevation, subalpine forest. Global Change Biology 2002, 8:459-478.
38. Morales P, Sykes MT, Prentice IC, Smith P, Smith B, Bugmann H, Zierl B, Friedlingstein P, Viovy N, Sabate S. Comparing and evaluating process-based ecosystem model predictions of carbon and water fluxes in major European forest biomes. Global Change Biology 2005, 11:2211-2233.
39. Myneni RB, Keeling CD, Tucker CJ, Asrar G, Nemani RR. Increased plant growth in the northern latitudes from 1981 to 1991. Nature 1997, 386:698-702.
40. Ollinger SV, Richardson AD, Martin ME, Hollinger DY, Frolking SE, Reich PB, Plourde LC, Katul GG, Munger JW, Oren R. Canopy nitrogen, carbon assimilation, and albedo in temperate and boreal forests: functional relations and potential climate feedbacks. Proceedings of the National Academy of Sciences, USA 2008, 105:19336-19341.
41. Pelkonen P, Hari P. The dependence of the spring time recovery of CO2 uptake in Scots pine on temperature and internal factors. Flora 1980, 169:398-404.
42. Porcar-Castell A, Juurola E, Ensminger I, Berninger F, Hari P, Nikinmaa E. Seasonal acclimation of photosystem II in Pinus sylvestris. II. Using the rate constants of sustained thermal energy dissipation and photochemistry to study the effect of the light environment. Tree Physiology 2008, 28:1483-1491.
43. Reichstein M, Falge E, Baldocchi D, Papale D, Aubinet M, Berbigier P, Bernhofer C, Buchmann N, Gilmanov T, Granier A. On the separation of net ecosystem exchange into assimilation and ecosystem respiration: review and improved algorithm. Global Change Biology 2005, 11:1424-1439.
44. Reichstein M, Papale D, Valentini R, Aubinet M, Bernhofer C, Knohl A, Laurila T, Lindroth A, Moors E, Pilegaard K. Determinants of terrestrial ecosystem carbon balance inferred from European eddy covariance flux sites. Geophysical Research Letters 2007, 34:L01402. http://dx.doi.org/10.1029/2006GL027880, doi:
45. Running SW. Relating plant capacitance to the water relations of Pinus contorta. Forest Ecology and Management 1980, 24:237-252.
46. Sage RF. Variation in the kcat of Rubisco in C3 and C4 plants and some implications for photosynthetic performance at high and low temperature. Journal of Experimental Botany 2002, 53:609-620.
47. Slot M, Wirth CH, Schumacher J, Mohren GMJ, Shibistova O, Lloyd J, Ensminger I. Regeneration patterns in boreal Scots pine glades linked to cold-induced photoinhibition. Tree Physiology 2005, 251:139-1150.
48. Strand M, Lundmark T, Soderbergh I, Mellander PE. Impacts of seasonal air and soil temperatures on photosynthesis in Scots pine trees. Tree Physiology 2002, 22:839-847.
49. Suni T, Berninger F, Markkanen T, Keronen P, Rannik Ü Vesala T. Interannual variability of growing-season timing, length, and CO2 exchange in a boreal forest. Journal of Geophysical Research 2003a, 108. http://dx.doi.org/2002JD002381, 4265, doi:
50. Suni T, Berninger F, Vesala T, Markkanen T, Hari P, Mäkelä A, Ilvesniemi H, Hanninen H, Nikinmaa E, Huttula T. Air temperature triggers the commencement of evergreen boreal forest photosynthesis in spring. Global Change Biology 2003b, 9:1410-1426.
51. Thum T, Aalto T, Laurila T, Aurela M, Hatakka J, Lindroth A, Vesala T. Spring initiation and autumn cessation of boreal coniferous forest CO2 exchange assessed by meteorological and biological variables. Tellus. Series B, Chemical and Physical Meteorology 2009, 61:701-717.
52. Thum T, Aalto T, Laurila T, Aurela M, Lindroth A, Vesala T. Assessing seasonality of biochemical CO2 exchange model parameters from micrometeorological flux observations at boreal coniferous forest. Biogeosciences 2008, 5:1625-1639.
53. Vaganov E, Hughes M, Kirdyanov A, Schweingruber FH, Silkin PP. Influence of snowfall and melt timing on tree growth on tree growth on subartic Eurasia. Nature 1999, 400:149-151.
54. Valentini R, Matteucci G, Dolman AJ, Schulze ED, Rebmann C, Moors EJ, Granier A, Gross P, Jensen NO, Pilegaard K. Respiration as the main determinant of carbon balance in European forests. Nature 2000, 404:861-865.
55. Vapaavuori EM, Rikala R, Ryyppö A. Effects of root temperature on growth and photosynthesis on conifer seedlings during shoot elongation. Tree Physiology 1992, 10:217-230.
56. Vogel JG, Bond-Lamberty BP, Schuur EAG, Gower ST, Mack MC, O'Connell KEB, Valentine DW, Ruess RW. Carbon allocation in boreal black spruce forests across regions varying in soil temperature and precipitation. Global Change Biology 2008, 14:1503-1516.
57. Xing Z, Bourque C A, Clowater WC, Krasowski M, Meng F-R. Carbon and biomass partitioning in balsam fir (Abies balsamea (L.) Mill.). Tree Physiology 2005, 25:1207-1217.
58. Xu L, Baldocchi DD, Tang J. How soil moisture, rain pulses, and growth alter the response of ecosystem respiration to temperature. Global Biogeochemical Cycles 2004, 18:1-10.
59. Yuan FM, Arain MA, Barr AG, Black TA, Bourque CPA, Coursolle C, Margolis HA, McCaughey JH, Wofsy SC. Modeling analysis of primary controls on net ecosystem productivity of seven boreal and temperate coniferous forests across a continental transect. Global Change Biology 2008, 14:1765-1784.
60. Yuan W, Liu S, Zhou G, Tieszen LL, Baldocchi D, Bernhofer C, Gholz H, Goldstein AH, Goulden ML, Hollinger DY. Deriving a light use efficiency model from eddy covariance flux data for predicting daily gross primary production across biomes. Agricultural and Forest Meteorology 2007, 143:189-207.