Top-down mass analysis of protein tyrosine nitration: Comparison of electron capture dissociation with "slow-heating" tandem mass spectrometry methods

Analytical Chemistry

Volumn 82, Issue 17, 2010, Pages 7283-7292

  Mikhailov, Victor A ^a,c   Iniesta, Jesus ^b   Cooper, Helen J ^a  

^a UNIVERSITY OF BIRMINGHAM   (United Kingdom)

^b UNIVERSITY OF ALICANTE   (Spain)

^c UNIVERSITY OF BRISTOL   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

COLLISION-INDUCED DISSOCIATION; CYTOCHROME C; ELECTRON CAPTURE DISSOCIATION; FOURIER TRANSFORM ION CYCLOTRON RESONANCE; INFRARED MULTIPHOTON DISSOCIATION; MASS ANALYSIS; MS/MS ANALYSIS; NITRO GROUP; PATHOLOGICAL CONDITIONS; POST-TRANSLATIONAL MODIFICATIONS; POTENTIAL SITES; PROTEIN BACKBONE; PROTEIN IONS; TANDEM MASS SPECTROMETRY; TOPDOWN; TYROSINE NITRATION;

AMINO ACIDS; DISSOCIATION; ELECTRON AFFINITY; FOURIER TRANSFORMS; HEATING; MASS SPECTROMETRY; PHOSPHATASES; PROTEINS; REDUCTION;

NITRATION;

CYTOCHROME C; LYSOZYME; MYOGLOBIN; NITRO DERIVATIVE; PROTEIN; TYROSINE;

ARTICLE; CHEMISTRY; FOURIER ANALYSIS; METHODOLOGY; TANDEM MASS SPECTROMETRY; TEMPERATURE;

CYTOCHROMES C; FOURIER ANALYSIS; MURAMIDASE; MYOGLOBIN; NITRO COMPOUNDS; PROTEINS; TANDEM MASS SPECTROMETRY; TEMPERATURE; TYROSINE;

EID: 77956241642     PISSN: 00032700     EISSN: None     Source Type: Journal    
DOI: 10.1021/ac101177r     Document Type: Article

References (48)

1. Abello, N., Kerstjens, H. A. M., Postma, D. S., and Bischoff, R. J. Proteome Res. 2009, 8, 3222-3238
2. Ischiropoulos, H. Arch. Biochem. Biophys. 1998, 356, 1-11
3. Greenacre, S. A. and Ischiropoulos, H. Free Radical Res. 2001, 34, 541-581
4. Good, P. F., Werner, P., Hsu, A., Olanow, C. W., and Perl, D. P. Am. J. Pathol. 1996, 149, 21-28
5. Shishehbor, M. H., Aviles, R. J., Brennan, M. L., Fu, X. M., Goormastic, M., Pearce, G. L., Gokce, N., Keaney, J. F., Penn, M. S., Sprecher, D. L., Vita, J. A., and Hazen, S. L. JAMA, J. Am. Med. Assoc. 2003, 289, 1675-1680
6. Parastatidis, I., Thomson, L., Burke, A., Chernysh, I., Nagaswami, C., Visser, J., Stamer, S., Liebler, D. C., Koliakos, G., Heijnen, H. F. G., Fitzgerald, G. A., Weisel, J. W., and Ischiropoulos, H. J. Biol. Chem. 2008, 283, 33846-33853
7. Ischiropoulos, H. Biochem. Biophys. Res. Commun. 2003, 305, 776-83
8. Jiao, K., Mandapati, S., Skipper, P. L., Tannenbaum, S. R., and Wishnok, J. S. Anal. Biochem. 2001, 293, 43-52
9. Wong, P. S. and van der Vliet, A. Methods Enzymol. 2002, 359, 399-410
10. Ghesquière, B., Colaert, N., Helsens, K., Dejager, L., Vanhaute, C., Verleysen, K., Kas, K., Timmerman, E., Goethals, M., Libert, C., Vandekerckhove, J., and Gevaert, K. Mol. Cell. Proteomics 2009, 8, 2642-2652
11. Chiappetta, G., Corbo, C., Palmese, A., Marino, G., and Amoresano, A. Proteomics 2009, 9, 1524-1537
12. Amoresano, A., Chiappetta, G., Pucci, P., D'Ischia, M., and Marino, G. Anal. Chem. 2007, 79, 2109-2117
13. Kelleher, N. L., Lin, H. Y., Valaskovic, G. A., Aaserud, D. J., Fridriksson, E. K., and McLafferty, F. W. J. Am. Chem. Soc. 1999, 121, 806-812
14. Kelleher, N. L. Anal. Chem. 2004, 76, 196A-203A
15. Bogdanov, B. and Smith, R. D. Mass Spectrom. Rev. 2005, 24, 168-200
16. Parks, B. A., Jiang, L., Thomas, P. M., Wenger, C. D., Roth, M. J., Boyne, M. T., Burke, P. V., Kwast, K. E., and Kelleher, N. L. Anal. Chem. 2007, 79, 7984-7991
17. Han, X. M., Jin, M., Breuker, K., and McLafferty, F. W. Science 2006, 314, 109-112
18. McLuckey, S. A. and Goeringer, D. E. J. Mass Spectrom. 1997, 32, 461-474
19. Little, D. P., Speir, J. P., Senko, M. W., O'Connor, P. B., and McLafferty, F. W. Anal. Chem. 1994, 66, 2809-2815
20. Woodin, R. L., Bomse, D. S., and Beauchamp, J. L. J. Am. Chem. Soc. 1978, 100, 3248-3250
21. Roepstorff, P. and Fohlman, J. Biomed. Mass Spectrom. 1984, 11, 601-601
22. Zubarev, R. A., Kelleher, N. L., and McLafferty, F. W. J. Am. Chem. Soc. 1998, 120, 3265-3266
23. Syka, J. E. P., Coon, J. J., Schroeder, M. J., Shabanowitz, J., and Hunt, D. F. Proc. Natl. Acad. Sci. U.S.A. 2004, 101, 9528
24. Zubarev, R. A., Kruger, N. A., Fridriksson, E. K., Lewis, M. A., Horn, D. M., Carpenter, B. K., and McLafferty, F. W. J. Am. Chem. Soc. 1999, 121, 2857-2862
25. Leymarie, N., Costello, C. E., and O'Connor, P. B. J. Am. Chem. Soc. 2003, 125, 8949-8958
26. Syrstad, E. A. and Turecek, F. J. Am. Soc. Mass Spectrom. 2005, 16, 208-224
27. Simons, J. Chem. Phys. Let. 2010, 484, 81-95
28. Cooper, H. J., Hudgins, R. R., Hakansson, K., and Marshall, A. G. Int. J. Mass Spectrom. 2003, 228, 723-728
29. Axelsson, J., Palmblad, M., Hakansson, K., and Hakansson, P. Rapid Commun. Mass Spectrom. 1999, 13, 474-477
30. Zubarev, R. A., Horn, D. M., Fridriksson, E. K., Kelleher, N. L., Kruger, N. A., Lewis, M. A., Carpenter, B. K., and McLafferty, F. W. Anal. Chem. 2000, 72, 563-573
31. Kelleher, R. L., Zubarev, R. A., Bush, K., Furie, B., Furie, B. C., McLafferty, F. W., and Walsh, C. T. Anal. Chem. 1999, 71, 4250-4253
32. Shi, S. D. H., Hemling, M. E., Carr, S. A., Horn, D. M., Lindh, I., and McLafferty, F. W. Anal. Chem. 2001, 73, 19-22
33. Stensballe, A., Jensen, O. N., Olsen, J. V., Haselmann, K. F., and Zubarev, R. A. Rapid Commun. Mass Spectrom. 2000, 14, 1793-1800
34. Hakansson, K., Cooper, H. J., Emmett, M. R., Costello, C. E., Marshall, A. G., and Nilsson, C. L. Anal. Chem. 2001, 73, 4530-4536
35. Mirgorodskaya, E., Roepstorff, P., and Zubarev, R. A. Anal. Chem. 1999, 71, 4431-4436
36. Cooper, H. J., Heath, J. K., Jaffray, E., Hay, R. T., Lam, T. T., and Marshall, A. G. Anal. Chem. 2004, 76, 6982-6988
37. Cooper, H. J., Tatham, M. H., Jaffray, E., Heath, J. K., Lam, T. T., Marshall, A. G., and Hay, R. T. Anal. Chem. 2005, 77, 6310-6319
38. Jones, A. W., Mikhailov, V. A., Iniesta, J., and Cooper, H. J. J. Am. Soc. Mass Spectrom. 2010, 21, 268-277
39. Sohn, C. H., Chung, C. K., Yin, S., Ramachandran, P., Loo, J. A., and Beauchamp, J. L. J. Am. Chem. Soc. 2009, 131, 5444-5459
40. Mikhailov, V. A. and Cooper, H. J. J. Am. Soc. Mass Spectrom. 2009, 20, 763-771
41. Horn, D. M., Breuker, K., Frank, A. J., and McLafferty, F. W. J. Am. Chem. Soc. 2001, 123, 9792-9799
42. Kendall, G., Cooper, H. J., Heptinstall, J., Derrick, P. J., Walton, D. J., and Peterson, I. R. Arch. Biochem. Biophys. 2001, 392, 169-179
43. Matters, D., Cooper, H. J., McDonnell, L., Iniesta, J., Heptinstall, J., Derrick, P., Walton, D., and Peterson, I. Anal. Biochem. 2006, 356, 171-181
44. Iniesta, J., Esclapez-Vicente, M. D., Heptinstall, J., Walton, D. J., Peterson, I. R., Mikhailov, V. A., and Cooper, H. J. Enzyme Microb. Technol. 2010, 46, 472-478
45. Iniesta, J., Cooper, H. J., Marshall, A. G., Heptinstall, J., Walton, D. J., and Peterson, I. R. Arch. Biochem. Biophys. 2008, 474, 1-7
46. Vaz, S. M., Prado, F. M., Di Mascio, P., and Augusto, O. Arch. Biochem. Biophys. 2009, 484, 127-133
47. Abriata, L. A., Cassina, A., Tórtora, V., Marín, M., Souza, J. M., Castro, L., Vila, A. J., and Radi, R. J. Biol. Chem. 2009, 284, 17-26
48. Batthyany, C., Souza, J. M., Duran, R., Cassina, A., Cervenansky, C., and Radi, R. Biochemistry 2005, 44, 8038-8046