-
1
-
-
1842717952
-
Comparative analysis of amino acid repeats in rodents and humans
-
10.1101/gr.1925704 15059995
-
MM Alba R Guigo 2004 Comparative analysis of amino acid repeats in rodents and humans Genome Res 14 549 554 10.1101/gr.1925704 15059995
-
(2004)
Genome Res
, vol.14
, pp. 549-554
-
-
Alba, M.M.1
Guigo, R.2
-
2
-
-
19544394236
-
A molecular pathogenesis for transcription factor associated poly-alanine tract expansions
-
10.1093/hmg/ddh277 15333588
-
AN Albrecht U Kornak A Boddrich K Suring PN Robinson AC Stiege R Lurz S Stricker EE Wanker S Mundlos 2004 A molecular pathogenesis for transcription factor associated poly-alanine tract expansions Hum Mol Genet 13 2351 2359 10.1093/hmg/ddh277 15333588
-
(2004)
Hum Mol Genet
, vol.13
, pp. 2351-2359
-
-
Albrecht, A.N.1
Kornak, U.2
Boddrich, A.3
Suring, K.4
Robinson, P.N.5
Stiege, A.C.6
Lurz, R.7
Stricker, S.8
Wanker, E.E.9
Mundlos, S.10
-
3
-
-
0036072745
-
Tandem repeats in protein coding regions of primate genes
-
10.1101/gr.138802 12045144
-
B Borstnik D Pumpernik 2002 Tandem repeats in protein coding regions of primate genes Genome Res 12 909 915 10.1101/gr.138802 12045144
-
(2002)
Genome Res
, vol.12
, pp. 909-915
-
-
Borstnik, B.1
Pumpernik, D.2
-
4
-
-
0034669139
-
Phylogeny of the SOX family of developmental transcription factors based on sequence and structural indicators
-
10.1006/dbio.2000.9883 11071752
-
J Bowles G Schepers P Koopman 2000 Phylogeny of the SOX family of developmental transcription factors based on sequence and structural indicators Dev Biol 227 239 255 10.1006/dbio.2000.9883 11071752
-
(2000)
Dev Biol
, vol.227
, pp. 239-255
-
-
Bowles, J.1
Schepers, G.2
Koopman, P.3
-
5
-
-
0347418199
-
Alanine tracts: The expanding story of human illness and trinucleotide repeats
-
10.1016/j.tig.2003.11.002 14698619
-
LY Brown SA Brown 2004 Alanine tracts: the expanding story of human illness and trinucleotide repeats Trends Genet 20 51 58 10.1016/j.tig.2003.11. 002 14698619
-
(2004)
Trends Genet
, vol.20
, pp. 51-58
-
-
Brown, L.Y.1
Brown, S.A.2
-
6
-
-
4644373266
-
A genomic basis for the evolution of vertebrate transcription factors containing amino acid runs
-
10.1534/genetics.104.029082 15342519
-
S Caburet D Vaiman RA Veitia 2004 A genomic basis for the evolution of vertebrate transcription factors containing amino acid runs Genetics 167 1813 1820 10.1534/genetics.104.029082 15342519
-
(2004)
Genetics
, vol.167
, pp. 1813-1820
-
-
Caburet, S.1
Vaiman, D.2
Veitia, R.A.3
-
8
-
-
0028209305
-
Species-specific interaction of the glutamine-rich activation domains of Sp1 with the TATA box-binding protein
-
8114696
-
A Emili J Greenblatt CJ Ingles 1994 Species-specific interaction of the glutamine-rich activation domains of Sp1 with the TATA box-binding protein Mol Cell Biol 14 1582 1593 8114696
-
(1994)
Mol Cell Biol
, vol.14
, pp. 1582-1593
-
-
Emili, A.1
Greenblatt, J.2
Ingles, C.J.3
-
9
-
-
0030236944
-
Transcriptional activation and transient expression of the human androgen receptor
-
10.1016/S0960-0760(96)00097-0 9009233
-
T Gao M Marcelli MJ McPhaul 1996 Transcriptional activation and transient expression of the human androgen receptor J Steroid Biochem Mol Biol 59 9 20 10.1016/S0960-0760(96)00097-0 9009233
-
(1996)
J Steroid Biochem Mol Biol
, vol.59
, pp. 9-20
-
-
Gao, T.1
Marcelli, M.2
McPhaul, M.J.3
-
10
-
-
23444458415
-
Transcriptional activation modulated by homopolymeric glutamine and proline stretches
-
10.1126/science.8303297 8303297
-
HP Gerber K Seipel O Georgiev M Hofferer M Hug S Rusconi W Schaffner 1994 Transcriptional activation modulated by homopolymeric glutamine and proline stretches Science 263 808 811 10.1126/science.8303297 8303297
-
(1994)
Science
, vol.263
, pp. 808-811
-
-
Gerber, H.P.1
Seipel, K.2
Georgiev, O.3
Hofferer, M.4
Hug, M.5
Rusconi, S.6
Schaffner, W.7
-
11
-
-
0028325481
-
Codon reiteration and the evolution of proteins
-
10.1073/pnas.91.10.4298 8183904
-
H Green N Wang 1994 Codon reiteration and the evolution of proteins Proc Natl Acad Sci USA 91 4298 4302 10.1073/pnas.91.10.4298 8183904
-
(1994)
Proc Natl Acad Sci USA
, vol.91
, pp. 4298-4302
-
-
Green, H.1
Wang, N.2
-
12
-
-
53049088719
-
Having it both ways: Sox protein function between conservation and innovation
-
10.1007/s00018-008-8138-7 18516494
-
SIE Guth M Wegner 2008 Having it both ways: Sox protein function between conservation and innovation Cell Mol Life Sci 65 3000 3018 10.1007/s00018-008- 8138-7 18516494
-
(2008)
Cell Mol Life Sci
, vol.65
, pp. 3000-3018
-
-
Guth, S.I.E.1
Wegner, M.2
-
13
-
-
0029983147
-
Trinucleotide repeats and long homopeptides in genes and proteins associated with nervous system disease and development
-
10.1073/pnas.93.4.1560 8643671
-
S Karlin C Burge 1996 Trinucleotide repeats and long homopeptides in genes and proteins associated with nervous system disease and development Proc Natl Acad Sci USA 93 1560 1565 10.1073/pnas.93.4.1560 8643671
-
(1996)
Proc Natl Acad Sci USA
, vol.93
, pp. 1560-1565
-
-
Karlin, S.1
Burge, C.2
-
15
-
-
24644470107
-
Comparative genomics on SOX2 orthologs
-
16077994
-
Y Katoh M Katoh 2005 Comparative genomics on SOX2 orthologs Oncol Rep 14 797 800 16077994
-
(2005)
Oncol Rep
, vol.14
, pp. 797-800
-
-
Katoh, Y.1
Katoh, M.2
-
16
-
-
0029953723
-
A soluble transcription factor, Oct-1, is also found in the insoluble nuclear matrix and possesses silencing activity in its alanine-rich domain
-
8754837
-
MK Kim LA Lesoon-Wood BD Weintraub JH Chung 1996 A soluble transcription factor, Oct-1, is also found in the insoluble nuclear matrix and possesses silencing activity in its alanine-rich domain Mol Cell Biol 16 4366 4377 8754837
-
(1996)
Mol Cell Biol
, vol.16
, pp. 4366-4377
-
-
Kim, M.K.1
Lesoon-Wood, L.A.2
Weintraub, B.D.3
Chung, J.H.4
-
17
-
-
0023665902
-
An analysis of 5′-noncoding sequences from 699 vertebrate messenger RNAs
-
10.1093/nar/15.20.8125 3313277
-
M Kozak 1987 An analysis of 5′-noncoding sequences from 699 vertebrate messenger RNAs Nucleic Acids Res 15 8125 8148 10.1093/nar/15.20.8125 3313277
-
(1987)
Nucleic Acids Res
, vol.15
, pp. 8125-8148
-
-
Kozak, M.1
-
19
-
-
0036913192
-
Transcription factor SOX3 is involved in X-linked mental retardation with growth hormone deficiency
-
10.1086/344661 12428212
-
F Laumonnier N Ronce BC Hamel P Thomas J Lespinasse M Raynaud C Paringaux H Van Bokhoven V Kalscheuer JP Fryns J Chelly C Moraine S Briault 2002 Transcription factor SOX3 is involved in X-linked mental retardation with growth hormone deficiency Am J Hum Genet 71 1450 1455 10.1086/344661 12428212
-
(2002)
Am J Hum Genet
, vol.71
, pp. 1450-1455
-
-
Laumonnier, F.1
Ronce, N.2
Hamel, B.C.3
Thomas, P.4
Lespinasse, J.5
Raynaud, M.6
Paringaux, C.7
Van Bokhoven, H.8
Kalscheuer, V.9
Fryns, J.P.10
Chelly, J.11
Moraine, C.12
Briault, S.13
-
20
-
-
10744223971
-
Polymorphism, shared functions and convergent evolution of genes with sequences coding for polyalanine domains
-
10.1093/hmg/ddg329 14519685
-
H Lavoie F Debeane QD Trinh JF Turcotte LP Corbeil-Girard MJ Dicaire A Saint-Denis M Page GA Rouleau B Brais 2003 Polymorphism, shared functions and convergent evolution of genes with sequences coding for polyalanine domains Hum Mol Genet 12 2967 2979 10.1093/hmg/ddg329 14519685
-
(2003)
Hum Mol Genet
, vol.12
, pp. 2967-2979
-
-
Lavoie, H.1
Debeane, F.2
Trinh, Q.D.3
Turcotte, J.F.4
Corbeil-Girard, L.P.5
Dicaire, M.J.6
Saint-Denis, A.7
Page, M.8
Rouleau, G.A.9
Brais, B.10
-
21
-
-
34748830336
-
Control of cell fate and differentiation by Sry-related high-mobility-group box (Sox) transcription factors
-
10.1016/j.biocel.2007.05.019 17625949
-
V Lefebvre B Dumitriu A Penzo-Mendez Y Han B Pallavi 2007 Control of cell fate and differentiation by Sry-related high-mobility-group box (Sox) transcription factors Int J Biochem Cell Biol 39 2195 2214 10.1016/j.biocel. 2007.05.019 17625949
-
(2007)
Int J Biochem Cell Biol
, vol.39
, pp. 2195-2214
-
-
Lefebvre, V.1
Dumitriu, B.2
Penzo-Mendez, A.3
Han, Y.4
Pallavi, B.5
-
22
-
-
0024340524
-
The proline-rich transcriptional activator of CTF/NF-I is distinct from the replication and DNA binding domain
-
10.1016/0092-8674(89)90108-6 2504497
-
N Mermod EA O'Neill TJ Kelly R Tjian 1989 The proline-rich transcriptional activator of CTF/NF-I is distinct from the replication and DNA binding domain Cell 58 741 753 10.1016/0092-8674(89)90108-6 2504497
-
(1989)
Cell
, vol.58
, pp. 741-753
-
-
Mermod, N.1
O'Neill, E.A.2
Kelly, T.J.3
Tjian, R.4
-
23
-
-
0024396320
-
Transcriptional regulation in mammalian cells by sequence-specific DNA binding proteins
-
10.1126/science.2667136 2667136
-
PJ Mitchell R Tjian 1989 Transcriptional regulation in mammalian cells by sequence-specific DNA binding proteins Science 245 371 378 10.1126/science. 2667136 2667136
-
(1989)
Science
, vol.245
, pp. 371-378
-
-
Mitchell, P.J.1
Tjian, R.2
-
24
-
-
0033985147
-
Evolution of N-terminal sequences of the vertebrate HOXA13 protein
-
10.1007/s003350010029 10656931
-
DP Mortlock P Sateesh JW Innis 2000 Evolution of N-terminal sequences of the vertebrate HOXA13 protein Mamm Genome 11 151 158 10.1007/s003350010029 10656931
-
(2000)
Mamm Genome
, vol.11
, pp. 151-158
-
-
Mortlock, D.P.1
Sateesh, P.2
Innis, J.W.3
-
25
-
-
0029871929
-
Altered growth and branching patterns in synpolydactyly caused by mutations in HOXD13
-
10.1126/science.272.5261.548 8614804
-
Y Muragaki S Mundlos J Upton BR Olsen 1996 Altered growth and branching patterns in synpolydactyly caused by mutations in HOXD13 Science 272 548 551 10.1126/science.272.5261.548 8614804
-
(1996)
Science
, vol.272
, pp. 548-551
-
-
Muragaki, Y.1
Mundlos, S.2
Upton, J.3
Olsen, B.R.4
-
26
-
-
0030953366
-
Nucleotide compositional constraints on genomes generate alanine-, glycine-, and proline-rich structures in transcription factors
-
9335144
-
Y Nakachi T Hayakawa H Oota K Sumiyama L Wang S Ueda 1997 Nucleotide compositional constraints on genomes generate alanine-, glycine-, and proline-rich structures in transcription factors Mol Biol Evol 14 1042 1049 9335144
-
(1997)
Mol Biol Evol
, vol.14
, pp. 1042-1049
-
-
Nakachi, Y.1
Hayakawa, T.2
Oota, H.3
Sumiyama, K.4
Wang, L.5
Ueda, S.6
-
27
-
-
34748912582
-
Interactions between homopolymeric amino acids (HPAAs)
-
10.1110/ps.072955307 17766374
-
Y Oma Y Kino K Toriumi N Sasagawa S Ishiura 2007 Interactions between homopolymeric amino acids (HPAAs) Protein Sci 16 2195 2204 10.1110/ps.072955307 17766374
-
(2007)
Protein Sci
, vol.16
, pp. 2195-2204
-
-
Oma, Y.1
Kino, Y.2
Toriumi, K.3
Sasagawa, N.4
Ishiura, S.5
-
28
-
-
0033810880
-
Absence of SOX3 in the developing marsupial gonad is not consistent with a conserved role in mammalian sex determination
-
10.1002/1526-968X(200008)27:4<145::AID-GENE30>3.0.CO;2-7 10992324
-
AJ Pask JL Harry MB Renfree JA Marshall Graves 2000 Absence of SOX3 in the developing marsupial gonad is not consistent with a conserved role in mammalian sex determination Genesis 27 145 152 10.1002/1526-968X(200008)27: 4<145::AID-GENE30>3.0.CO;2-7 10992324
-
(2000)
Genesis
, vol.27
, pp. 145-152
-
-
Pask, A.J.1
Harry, J.L.2
Renfree, M.B.3
Marshall Graves, J.A.4
-
29
-
-
67650720512
-
Systematic study of protein sumoylation: Development of a site-specific predictor of SUMOsp 2.0
-
10.1002/pmic.200800646 19504496
-
J Ren X Gao C Jin M Zhu X Wang A Shaw L Wen X Yao Y Xue 2009 Systematic study of protein sumoylation: development of a site-specific predictor of SUMOsp 2.0 Proteomics 9 3409 3412 10.1002/pmic.200800646 19504496
-
(2009)
Proteomics
, vol.9
, pp. 3409-3412
-
-
Ren, J.1
Gao, X.2
Jin, C.3
Zhu, M.4
Wang, X.5
Shaw, A.6
Wen, L.7
Yao, X.8
Xue, Y.9
-
30
-
-
19644381296
-
SUMO represses transcriptional activity of the Drosophila SoxNeuro and human Sox3 central nervous system-specific transcription factors
-
10.1091/mbc.E04-12-1062 15788563
-
J Savare N Bonneaud F Girard 2005 SUMO represses transcriptional activity of the Drosophila SoxNeuro and human Sox3 central nervous system-specific transcription factors Mol Biol Cell 16 2660 2669 10.1091/mbc.E04-12-1062 15788563
-
(2005)
Mol Biol Cell
, vol.16
, pp. 2660-2669
-
-
Savare, J.1
Bonneaud, N.2
Girard, F.3
-
32
-
-
0029991867
-
The WW module competes with the SH3 domain?
-
8871396
-
M Sudol 1996 The WW module competes with the SH3 domain? Trends Biochem Sci 21 161 163 8871396
-
(1996)
Trends Biochem Sci
, vol.21
, pp. 161-163
-
-
Sudol, M.1
-
33
-
-
0029818399
-
Class III POU genes: Generation of homopolymeric amino acid repeats under GC pressure in mammals
-
10.1007/BF02338824 8703082
-
K Sumiyama K Washio-Watanabe N Saitou T Hayakawa S Ueda 1996 Class III POU genes: generation of homopolymeric amino acid repeats under GC pressure in mammals J Mol Evol 43 170 178 10.1007/BF02338824 8703082
-
(1996)
J Mol Evol
, vol.43
, pp. 170-178
-
-
Sumiyama, K.1
Washio-Watanabe, K.2
Saitou, N.3
Hayakawa, T.4
Ueda, S.5
-
34
-
-
0032789437
-
Two distinct subgroups of Group B Sox genes for transcriptional activators and repressors: Their expression during embryonic organogenesis of the chicken
-
10.1016/S0925-4773(99)00083-0 10473124
-
M Uchikawa Y Kamachi H Kondoh 1999 Two distinct subgroups of Group B Sox genes for transcriptional activators and repressors: their expression during embryonic organogenesis of the chicken Mech Dev 84 103 120 10.1016/S0925- 4773(99)00083-0 10473124
-
(1999)
Mech Dev
, vol.84
, pp. 103-120
-
-
Uchikawa, M.1
Kamachi, Y.2
Kondoh, H.3
-
35
-
-
0033559518
-
From head to toes: The multiple facets of Sox proteins
-
10.1093/nar/27.6.1409 10037800
-
M Wegner 1999 From head to toes: the multiple facets of Sox proteins Nucleic Acids Res 27 1409 1420 10.1093/nar/27.6.1409 10037800
-
(1999)
Nucleic Acids Res
, vol.27
, pp. 1409-1420
-
-
Wegner, M.1
-
36
-
-
36048940944
-
Polyalanine expansion mutations in the X-linked hypopituitarism gene SOX3 result in aggresome formation and impaired transactivation
-
10.2741/2213 17127446
-
J Wong P Farlie S Holbert P Lockhart PQ Thomas 2007 Polyalanine expansion mutations in the X-linked hypopituitarism gene SOX3 result in aggresome formation and impaired transactivation Front Biosci 12 2085 2095 10.2741/2213 17127446
-
(2007)
Front Biosci
, vol.12
, pp. 2085-2095
-
-
Wong, J.1
Farlie, P.2
Holbert, S.3
Lockhart, P.4
Thomas, P.Q.5
-
37
-
-
20244386714
-
Over- and underdosage of SOX3 is associated with infundibular hypoplasia and hypopituitarism
-
10.1086/430134 15800844
-
KS Woods M Cundall J Turton K Rizotti A Mehta R Palmer J Wong WK Chong M Al-Zyoud M El-Ali T Otonkoski JP Martinez-Barbera PQ Thomas IC Robinson R Lovell-Badge KJ Woodward MT Dattani 2005 Over- and underdosage of SOX3 is associated with infundibular hypoplasia and hypopituitarism Am J Hum Genet 76 833 849 10.1086/430134 15800844
-
(2005)
Am J Hum Genet
, vol.76
, pp. 833-849
-
-
Woods, K.S.1
Cundall, M.2
Turton, J.3
Rizotti, K.4
Mehta, A.5
Palmer, R.6
Wong, J.7
Chong, W.K.8
Al-Zyoud, M.9
El-Ali, M.10
Otonkoski, T.11
Martinez-Barbera, J.P.12
Thomas, P.Q.13
Robinson, I.C.14
Lovell-Badge, R.15
Woodward, K.J.16
Dattani, M.T.17
|