-
1
-
-
0346728473
-
Systematic genome-wide screens of gene function
-
Carpenter AE, Sabatini DM: Systematic genome-wide screens of gene function. Nat Rev Genet 2004 ; 5: 11-22.
-
(2004)
Nat Rev Genet
, vol.5
, pp. 11-22
-
-
Carpenter, A.E.1
Sabatini, D.M.2
-
2
-
-
14044278213
-
A multi-faceted approach to the advancement of cell-based drug discovery
-
Garippa R.: A multi-faceted approach to the advancement of cell-based drug discovery. Drug Discov World 2004 ; 6: 43-55.
-
(2004)
Drug Discov World
, vol.6
, pp. 43-55
-
-
Garippa, R.1
-
3
-
-
33747624926
-
High-throughput fluorescence microscopy for systems biology
-
Pepperkok R., Ellenberg J.: High-throughput fluorescence microscopy for systems biology. Nat Rev Mol Cell Biol 2006 ; 7: 690-696.
-
(2006)
Nat Rev Mol Cell Biol
, vol.7
, pp. 690-696
-
-
Pepperkok, R.1
Ellenberg, J.2
-
4
-
-
20044366920
-
Cell microarrays and RNA interference chip away at gene function
-
Wheeler DB, Carpenter AE, Sabatini DM Cell microarrays and RNA interference chip away at gene function. Nat Genet 2005 ; 37 (suppl): S25 - S30.
-
(2005)
Nat Genet
, vol.37
-
-
Wheeler, D.B.1
Carpenter, A.E.2
Sabatini, D.M.3
-
5
-
-
34247546735
-
Development of a multistage classifier for a monitoring system of cell activity based on imaging of chromosomal dynamics
-
Gambe AE, Ono RM, Matsunaga S., Kutsuna N., Higaki T., Higashi T., Hasezawa S.,, et al. Development of a multistage classifier for a monitoring system of cell activity based on imaging of chromosomal dynamics. Cytometry A 2007 ; 71: 286-296.
-
(2007)
Cytometry A
, vol.71
, pp. 286-296
-
-
Gambe, A.E.1
Ono, R.M.2
Matsunaga, S.3
Kutsuna, N.4
Higaki, T.5
Higashi, T.6
Hasezawa, S.7
-
6
-
-
33845760114
-
Automated subcellular location determination and high-throughput microscopy
-
Glory E., Murphy RF: Automated subcellular location determination and high-throughput microscopy. Dev Cell 2007 ; 12: 7-16.
-
(2007)
Dev Cell
, vol.12
, pp. 7-16
-
-
Glory, E.1
Murphy, R.F.2
-
7
-
-
33750268955
-
Automated recognition of mitotic patterns in fluorescence microscopy images of human cells
-
Harder N., Neumann B., Held M., Liebel U., Erfle H., Ellenberg J.,, et al. Automated recognition of mitotic patterns in fluorescence microscopy images of human cells. Proc ISBI2006 2006: 1016-1019.
-
(2006)
Proc ISBI2006
, pp. 1016-1019
-
-
Harder, N.1
Neumann, B.2
Held, M.3
Liebel, U.4
Erfle, H.5
Ellenberg, J.6
-
8
-
-
36949037952
-
Boosting multiclass learning with repeating codes and weak detectors for protein subcellular localization
-
Lin C., Tsai Y., Lin Y., Chiu T., Hsiung C., Lee M., Simpson JC,, et al. Boosting multiclass learning with repeating codes and weak detectors for protein subcellular localization. Bioinformatics 2007 ; 23: 3374-3381.
-
(2007)
Bioinformatics
, vol.23
, pp. 3374-3381
-
-
Lin, C.1
Tsai, Y.2
Lin, Y.3
Chiu, T.4
Hsiung, C.5
Lee, M.6
Simpson, J.C.7
-
9
-
-
33749537857
-
Genome-wide functional analysis of human cell-cycle regulators
-
Mukherji M., Bell R., Supekova L., Wang Y., Orth AP, Batalov S.,, et al. Genome-wide functional analysis of human cell-cycle regulators. Proc Natl Acad Sci USA 2006 ; 103: 14819-14824.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 14819-14824
-
-
Mukherji, M.1
Bell, R.2
Supekova, L.3
Wang, Y.4
Orth, A.P.5
Batalov, S.6
-
10
-
-
34249897787
-
A support vector machine classifier for recognizing mitotic subphases using high-content screening data
-
Tao CY, Hoyt J., Yan Feng: A support vector machine classifier for recognizing mitotic subphases using high-content screening data. J Biomol Screen 2007 ; 12: 490-496.
-
(2007)
J Biomol Screen
, vol.12
, pp. 490-496
-
-
Tao, C.Y.1
Hoyt, J.2
Feng, Y.3
-
11
-
-
45049086189
-
Computer vision for microscopy applications
-
Obinata G, Dutta A (eds): Vienna, Austria: I-Tech
-
Orlov N., Johnston J., Macura T., Shamir L., Goldberg I.: Computer vision for microscopy applications. In Obinata G, Dutta A (eds): Vision Systems: Segmentation and Pattern Recognition. Vienna, Austria: I-Tech, 2007: 221-242.
-
(2007)
Vision Systems: Segmentation and Pattern Recognition
, pp. 221-242
-
-
Orlov, N.1
Johnston, J.2
MacUra, T.3
Shamir, L.4
Goldberg, I.5
-
12
-
-
60549104030
-
Scoring diverse cellular morphologies in image-based screens with iterative feedback and machine learning
-
Jones TR, Carpenter AE, Lamprecht MR, Moffat J., Silver SJ, Grenier JK,, et al. Scoring diverse cellular morphologies in image-based screens with iterative feedback and machine learning. Proc Natl Acad Sci USA 2009 ; 106: 1826-1831.
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 1826-1831
-
-
Jones, T.R.1
Carpenter, A.E.2
Lamprecht, M.R.3
Moffat, J.4
Silver, S.J.5
Grenier, J.K.6
-
13
-
-
33845792555
-
CellProfiler: Image analysis software for identifying and quantifying cell phenotypes
-
Carpenter A., Jones T., Lamprecht M., Clarke C., Kang I., Friman O., et al. CellProfiler: image analysis software for identifying and quantifying cell phenotypes. Genome Biol 2006 ; 7: R100.
-
(2006)
Genome Biol
, vol.7
, pp. 100
-
-
Carpenter, A.1
Jones, T.2
Lamprecht, M.3
Clarke, C.4
Kang, I.5
Friman, O.6
-
14
-
-
66849105950
-
Extracting rich information from images
-
Carpenter AE: Extracting rich information from images. Methods Mol Biol 2009 ; 486: 193-211.
-
(2009)
Methods Mol Biol
, vol.486
, pp. 193-211
-
-
Carpenter, A.E.1
-
15
-
-
44249121081
-
Using CellProfiler for automatic identification and measurement of biological objects in images
-
Vokes MS, Carpenter AE: Using CellProfiler for automatic identification and measurement of biological objects in images. Curr Protoc Mol Biol 2008 ; 14 :Unit 14.17.
-
(2008)
Curr Protoc Mol Biol
, vol.14
-
-
Vokes, M.S.1
Carpenter, A.E.2
-
16
-
-
31744445957
-
Microarrays of lentiviruses for gene function screens in immortalized and primary cells
-
Bailey SN, Ali SM, Carpenter AE, Higgins CO, Sabatini DM: Microarrays of lentiviruses for gene function screens in immortalized and primary cells. Nat Methods 2006 ; 3: 117-122.
-
(2006)
Nat Methods
, vol.3
, pp. 117-122
-
-
Bailey, S.N.1
Ali, S.M.2
Carpenter, A.E.3
Higgins, C.O.4
Sabatini, D.M.5
-
17
-
-
33751536886
-
In germ cells of mouse embryonic ovaries, the decision to enter meiosis precedes premeiotic DNA replication
-
Baltus AE, Menke DB, Hu Y., Goodheart ML, Carpenter AE, de Rooij DG,, et al. In germ cells of mouse embryonic ovaries, the decision to enter meiosis precedes premeiotic DNA replication. Nat Genet 2006 ; 38: 1430-1434.
-
(2006)
Nat Genet
, vol.38
, pp. 1430-1434
-
-
Baltus, A.E.1
Menke, D.B.2
Hu, Y.3
Goodheart, M.L.4
Carpenter, A.E.5
De Rooij, D.G.6
-
18
-
-
33845608850
-
Genetic architecture of Hsp90-dependent drug resistance
-
Cowen LE, Carpenter AE, Matangkasombut O., Fink GR, Lindquist S.: Genetic architecture of Hsp90-dependent drug resistance. Eukaryotic Cell 2006 ; 5: 2184-2188.
-
(2006)
Eukaryotic Cell
, vol.5
, pp. 2184-2188
-
-
Cowen, L.E.1
Carpenter, A.E.2
Matangkasombut, O.3
Fink, G.R.4
Lindquist, S.5
-
19
-
-
34250840412
-
The Spemann organizer gene, Goosecoid, promotes tumor metastasis
-
Hartwell KA, Muir B., Reinhardt F., Carpenter AE, Sgroi DC, Weinberg RA: The Spemann organizer gene, Goosecoid, promotes tumor metastasis. Proc Natl Acad Sci USA 2006 ; 103: 18969-18974.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 18969-18974
-
-
Hartwell, K.A.1
Muir, B.2
Reinhardt, F.3
Carpenter, A.E.4
Sgroi, D.C.5
Weinberg, R.A.6
-
20
-
-
58149510531
-
CellProfiler Analyst: Data exploration and analysis software for complex image-based screens
-
Jones T., Kang IH, Wheeler D., Lindquist R., Papallo A., Sabatini D.,, et al. CellProfiler Analyst: data exploration and analysis software for complex image-based screens. BMC Bioinformatics 2008 ; 9: 482.
-
(2008)
BMC Bioinformatics
, vol.9
, pp. 482
-
-
Jones, T.1
Kang, I.H.2
Wheeler, D.3
Lindquist, R.4
Papallo, A.5
Sabatini, D.6
-
21
-
-
64749108996
-
Tumours with PI3K activation are resistant to dietary restriction
-
Kalaany NY, Sabatini DM: Tumours with PI3K activation are resistant to dietary restriction. Nature 2009 ; 458: 725-731.
-
(2009)
Nature
, vol.458
, pp. 725-731
-
-
Kalaany, N.Y.1
Sabatini, D.M.2
-
22
-
-
33847710201
-
CellProfiler: Free, versatile software for automated biological image analysis
-
Lamprecht MR, Sabatini DM, Carpenter AE: CellProfiler: free, versatile software for automated biological image analysis. Biotechniques 2007 ; 42: 71-75.
-
(2007)
Biotechniques
, vol.42
, pp. 71-75
-
-
Lamprecht, M.R.1
Sabatini, D.M.2
Carpenter, A.E.3
-
23
-
-
33646033137
-
A lentiviral RNAi library for human and mouse genes applied to an arrayed viral high-content screen
-
Moffat J., Grueneberg DA, Yang X., Kim SY, Kloepfer AM, Hinkle G.,, et al. A lentiviral RNAi library for human and mouse genes applied to an arrayed viral high-content screen. Cell 2006 ; 124: 1283-1298.
-
(2006)
Cell
, vol.124
, pp. 1283-1298
-
-
Moffat, J.1
Grueneberg, D.A.2
Yang, X.3
Kim, S.Y.4
Kloepfer, A.M.5
Hinkle, G.6
-
24
-
-
67650787333
-
High-throughput screen for novel antimicrobials using a whole animal infection model
-
Moy TI, Conery AL, Larkins-Ford J., Wu G., Mazitschek R., Casadei G.,, et al. High-throughput screen for novel antimicrobials using a whole animal infection model. ACS Chem Biol 2009 ; 4: 527-533.
-
(2009)
ACS Chem Biol
, vol.4
, pp. 527-533
-
-
Moy, T.I.1
Conery, A.L.2
Larkins-Ford, J.3
Wu, G.4
Mazitschek, R.5
Casadei, G.6
-
25
-
-
57649174638
-
A novel small molecule regulator of guanine nucleotide exchange activity of the ADP-ribosylation factor and Golgi membrane trafficking
-
Pan H., Yu J., Zhang L., Carpenter A., Zhu H., Li L.,, et al. A novel small molecule regulator of guanine nucleotide exchange activity of the ADP-ribosylation factor and Golgi membrane trafficking. J Biol Chem 2008 ; 283: 31087-31096.
-
(2008)
J Biol Chem
, vol.283
, pp. 31087-31096
-
-
Pan, H.1
Yu, J.2
Zhang, L.3
Carpenter, A.4
Zhu, H.5
Li, L.6
-
26
-
-
17644415317
-
RNAi living-cell microarrays for loss-of-function screens in Drosophila melanogaster cells
-
Wheeler DB, Bailey SN, Guertin DA, Carpenter AE, Higgins CO, Sabatini DM: RNAi living-cell microarrays for loss-of-function screens in Drosophila melanogaster cells. Nat Methods 2004 ; 1: 127-132.
-
(2004)
Nat Methods
, vol.1
, pp. 127-132
-
-
Wheeler, D.B.1
Bailey, S.N.2
Guertin, D.A.3
Carpenter, A.E.4
Higgins, C.O.5
Sabatini, D.M.6
-
27
-
-
33947410825
-
Methods for high-content, high-throughput image-based cell screening
-
Jones TR, Carpenter AE, Sabatini DM, Golland P.: Methods for high-content, high-throughput image-based cell screening. Paper presented at the Workshop on Microscopic Image Analysis with Applications in Biology, Copenhagen, Demark, October 5, 2006.
-
Paper Presented at the Workshop on Microscopic Image Analysis with Applications in Biology
-
-
Jones, T.R.1
Carpenter, A.E.2
Sabatini, D.M.3
Golland, P.4
-
28
-
-
0033003760
-
A simple statistical parameter for use in evaluation and validation of high throughput screening assays
-
Zhang J., Chung TDY, Oldenburg KR: A simple statistical parameter for use in evaluation and validation of high throughput screening assays. J Biomol Screen 1999 ; 4: 67-73.
-
(1999)
J Biomol Screen
, vol.4
, pp. 67-73
-
-
Zhang, J.1
Tdy, C.2
Oldenburg, K.R.3
|