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Volumn 61, Issue 13, 2010, Pages 3759-3771

Mining the surface proteome of tomato (Solanum lycopersicum) fruit for proteins associated with cuticle biogenesis

Author keywords

Cuticle; cutin; lipid; proteome; tomato fruit; wax

Indexed keywords

CARBOXYLESTERASE; CUTINE; MEMBRANE LIPID; PROTEOME; VEGETABLE PROTEIN; WAX; CUTIN;

EID: 77955860805     PISSN: 00220957     EISSN: 14602431     Source Type: Journal    
DOI: 10.1093/jxb/erq194     Document Type: Article
Times cited : (77)

References (61)
  • 3
    • 10044262245 scopus 로고    scopus 로고
    • Composition of the surface wax from tomatoes: II. Quantification of the components at the ripe red stage and during ripening
    • Bauer S, Schulte E, Thier H. 2004. Composition of the surface wax from tomatoes: II. Quantification of the components at the ripe red stage and during ripening. European Food Research and Technology 219, 487-491.
    • (2004) European Food Research and Technology , vol.219 , pp. 487-491
    • Bauer, S.1    Schulte, E.2    Thier, H.3
  • 4
    • 34248182280 scopus 로고    scopus 로고
    • The acyltransferase GPAT5 is required for the synthesis of suberin in seed coat and root of Arabidopsis
    • Beisson F, Li Y, Bonaventure G, Pollard M, Ohlrogge JB. 2007. The acyltransferase GPAT5 is required for the synthesis of suberin in seed coat and root of Arabidopsis. The Plant Cell 19, 351-368.
    • (2007) The Plant Cell , vol.19 , pp. 351-368
    • Beisson, F.1    Li, Y.2    Bonaventure, G.3    Pollard, M.4    Ohlrogge, J.B.5
  • 6
    • 35448959667 scopus 로고    scopus 로고
    • Characterization of Arabidopsis ABCG11/WBC11, an ATP binding cassette (ABC) transporter that is required for cuticular lipid secretion
    • Bird D, Beisson F, Brigham A, Shin J, Greer S, Jetter R, Kunst L, Wu X, Yephremov A, Samuels L. 2007. Characterization of Arabidopsis ABCG11/WBC11, an ATP binding cassette (ABC) transporter that is required for cuticular lipid secretion. The Plant Journal 52, 485-498.
    • (2007) The Plant Journal , vol.52 , pp. 485-498
    • Bird, D.1    Beisson, F.2    Brigham, A.3    Shin, J.4    Greer, S.5    Jetter, R.6    Kunst, L.7    Wu, X.8    Yephremov, A.9    Samuels, L.10
  • 8
    • 11144220083 scopus 로고    scopus 로고
    • Analysis of the aliphatic monomer composition of polyesters associated with Arabidopsis epidermis: Occurrence of octadeca-cis-6, cis-9-diene-1,18- dioate as the major component
    • Bonaventure G, Beisson F, Ohlrogge J, Pollard M. 2004. Analysis of the aliphatic monomer composition of polyesters associated with Arabidopsis epidermis: occurrence of octadeca-cis-6, cis-9-diene-1,18-dioate as the major component. The Plant Journal 40, 920-930.
    • (2004) The Plant Journal , vol.40 , pp. 920-930
    • Bonaventure, G.1    Beisson, F.2    Ohlrogge, J.3    Pollard, M.4
  • 9
    • 70349869039 scopus 로고    scopus 로고
    • Three-dimensional imaging of plant cuticle architecture using confocal scanning laser microscopy
    • Buda GJ, Isaacson T, Matas AJ, Paolillo DJ, Rose JKC. 2009. Three-dimensional imaging of plant cuticle architecture using confocal scanning laser microscopy. The Plant Journal 60, 378-385.
    • (2009) The Plant Journal , vol.60 , pp. 378-385
    • Buda, G.J.1    Isaacson, T.2    Matas, A.J.3    Paolillo, D.J.4    Jkc, R.5
  • 10
    • 7244229525 scopus 로고    scopus 로고
    • Binding mechanism of nonspecific lipid transfer proteins and their role in plant defense
    • Cheng CS, Samuel D, Liu YJ, Shyu JC, Lai SM, Lin KF, Lyu PC. 2004. Binding mechanism of nonspecific lipid transfer proteins and their role in plant defense. Biochemistry 43, 13628-13636.
    • (2004) Biochemistry , vol.43 , pp. 13628-13636
    • Cheng, C.S.1    Samuel, D.2    Liu, Y.J.3    Shyu, J.C.4    Lai, S.M.5    Lin, K.F.6    Lyu, P.C.7
  • 11
    • 1542682265 scopus 로고    scopus 로고
    • Identification and partial characterization of a chitinase and a beta-1,3-glucanase from Copernicia cerifera wax
    • Cruz MAL, Gomes VM, Fernandes KVS, Machado OLT, Xavier J. 2002. Identification and partial characterization of a chitinase and a beta-1,3-glucanase from Copernicia cerifera wax. Plant Physiology and Biochemistry 40, 11-16.
    • (2002) Plant Physiology and Biochemistry , vol.40 , pp. 11-16
    • Mal, C.1    Gomes, V.M.2    Kvs, F.3    Olt, M.4    Xavier, J.5
  • 12
    • 66149161763 scopus 로고    scopus 로고
    • Arabidopsis LTPG is a glycosylphosphatidylinositol-anchored lipid transfer protein required for export of lipids to the plant surface
    • Debono A, Yeats TH, Rose JKC, Bird D, Jetter R, Kunst L, Samuels L. 2009. Arabidopsis LTPG is a glycosylphosphatidylinositol-anchored lipid transfer protein required for export of lipids to the plant surface. The Plant Cell 21, 1230-1238.
    • (2009) The Plant Cell , vol.21 , pp. 1230-1238
    • Debono, A.1    Yeats, T.H.2    Jkc, R.3    Bird, D.4    Jetter, R.5    Kunst, L.6    Samuels, L.7
  • 15
    • 68149099015 scopus 로고    scopus 로고
    • Arabidopsis thaliana GPAT8 and GPAT9 are localized to the ER and possess distinct ER retrieval signals: Functional divergence of the dilysine ER retrieval motif in plant cells
    • Gidda SK, Shockey JM, Rothstein SJ, Dyer JM, Mullen RT. 2009. Arabidopsis thaliana GPAT8 and GPAT9 are localized to the ER and possess distinct ER retrieval signals: functional divergence of the dilysine ER retrieval motif in plant cells. Plant Physiology and Biochemistry 47, 867-879.
    • (2009) Plant Physiology and Biochemistry , vol.47 , pp. 867-879
    • Gidda, S.K.1    Shockey, J.M.2    Rothstein, S.J.3    Dyer, J.M.4    Mullen, R.T.5
  • 16
    • 0029801592 scopus 로고    scopus 로고
    • Differential expression of two endo-1,4-beta-glucanase genes in pericarp and locules of wild-type and mutant tomato fruit
    • Gonzalez-Bosch C, Brummell DA, Bennett AB. 1996. Differential expression of two endo-1,4-beta-glucanase genes in pericarp and locules of wild-type and mutant tomato fruit. Plant Physiology 111, 1313-1319.
    • (1996) Plant Physiology , vol.111 , pp. 1313-1319
    • Gonzalez-Bosch, C.1    Brummell, D.A.2    Bennett, A.B.3
  • 17
    • 0037072496 scopus 로고    scopus 로고
    • Glycerol and glyceryl esters of omega-hydroxyacids in cutins
    • Graca J, Schreiber L, Rodrigues J, Pereira H. 2002. Glycerol and glyceryl esters of omega-hydroxyacids in cutins. Phytochemistry 61, 205-215.
    • (2002) Phytochemistry , vol.61 , pp. 205-215
    • Graca, J.1    Schreiber, L.2    Rodrigues, J.3    Pereira, H.4
  • 18
    • 56449107474 scopus 로고    scopus 로고
    • BioVenn\a web application for the comparison and visualization of biological lists using area-proportional Venn diagrams
    • Hulsen T, de Vlieg J, Alkema W. 2008. BioVenn\a web application for the comparison and visualization of biological lists using area-proportional Venn diagrams. BMC Genomics 9, 488.
    • (2008) BMC Genomics , vol.9 , pp. 488
    • Hulsen, T.1    De Vlieg, J.2    Alkema, W.3
  • 21
    • 70349861775 scopus 로고    scopus 로고
    • Cutin deficiency in the tomato fruit cuticle consistently affects resistance to microbial infection and biomechanical properties, but not transpirational water loss
    • Isaacson T, Kosma DK, Matas AJ, et al. 2009. Cutin deficiency in the tomato fruit cuticle consistently affects resistance to microbial infection and biomechanical properties, but not transpirational water loss. The Plant Journal 60, 363-377.
    • (2009) The Plant Journal , vol.60 , pp. 363-377
    • Isaacson, T.1    Kosma, D.K.2    Matas, A.J.3
  • 22
    • 34249803544 scopus 로고    scopus 로고
    • The plant cell wall proteome, or secretome
    • Finnie C, ed Oxford: Blackwell
    • Isaacson T, Rose JKC. 2006. The plant cell wall proteome, or secretome. In: Finnie C, ed. Plant proteomics. Oxford: Blackwell, 175-209.
    • (2006) Plant Proteomics , pp. 175-209
    • Isaacson, T.1    Jkc, R.2
  • 24
    • 84948094131 scopus 로고    scopus 로고
    • Composition of plant cuticular waxes
    • Riederer, M, Mü ller C, eds Oxford: Blackwell
    • Jetter R, Kunst L, Samuels AL. 2006. Composition of plant cuticular waxes. In: Riederer, M, Mü ller C, eds. Biology of the plant cuticle. Oxford: Blackwell, 145-181.
    • (2006) Biology of the Plant Cuticle , pp. 145-181
    • Jetter, R.1    Kunst, L.2    Samuels, A.L.3
  • 27
    • 33646126608 scopus 로고    scopus 로고
    • The epidermis-specific extracellular BODYGUARD controls cuticle development and morphogenesis in Arabidopsis
    • Kurdyukov S, Faust A, Nawrath C, et al. 2006a. The epidermis-specific extracellular BODYGUARD controls cuticle development and morphogenesis in Arabidopsis. The Plant Cell 18, 321-339.
    • (2006) The Plant Cell , vol.18 , pp. 321-339
    • Kurdyukov, S.1    Faust, A.2    Nawrath, C.3
  • 28
    • 33745394105 scopus 로고    scopus 로고
    • Genetic and biochemical evidence for involvement of HOTHEAD in the biosynthesis of long-chain a-,x-dicarboxylic fatty acids and formation of extracellular matrix
    • Kurdyukov S, Faust A, Trenkamp S, Bar S, Franke R, Efremova N, Tietjen K, Schreiber L, Saedler H, Yephremov A. 2006b. Genetic and biochemical evidence for involvement of HOTHEAD in the biosynthesis of long-chain a-,x-dicarboxylic fatty acids and formation of extracellular matrix. Planta 224, 315-329.
    • (2006) Planta , vol.224 , pp. 315-329
    • Kurdyukov, S.1    Faust, A.2    Trenkamp, S.3    Bar, S.4    Franke, R.5    Efremova, N.6    Tietjen, K.7    Schreiber, L.8    Saedler, H.9    Yephremov, A.10
  • 31
    • 34447120195 scopus 로고    scopus 로고
    • The developmental pattern of tomato fruit wax accumulation and its impact on cuticular transpiration barrier properties: Effects of a deficiency in a beta-ketoacyl-coenzyme a synthase (LeCER6)
    • Leide J, Hildebrandt U, Reussing K, Riederer M, Vogg G. 2007. The developmental pattern of tomato fruit wax accumulation and its impact on cuticular transpiration barrier properties: effects of a deficiency in a beta-ketoacyl-coenzyme a synthase (LeCER6). Plant Physiology 144, 1667-1679.
    • (2007) Plant Physiology , vol.144 , pp. 1667-1679
    • Leide, J.1    Hildebrandt, U.2    Reussing, K.3    Riederer, M.4    Vogg, G.5
  • 35
    • 48549105883 scopus 로고    scopus 로고
    • Gene expression and metabolism in tomato fruit surface tissues
    • Mintz-Oron S, Mandel T, Rogachev I, et al. 2008. Gene expression and metabolism in tomato fruit surface tissues. Plant Physiology 147, 823-851.
    • (2008) Plant Physiology , vol.147 , pp. 823-851
    • Mintz-Oron, S.1    Mandel, T.2    Rogachev, I.3
  • 36
    • 27244454556 scopus 로고    scopus 로고
    • The SOL Genomics Network: A comparative resource for Solanaceae biology and beyond
    • Mueller LA, Solow TH, Taylor N, et al. 2005. The SOL Genomics Network: a comparative resource for Solanaceae biology and beyond. Plant Physiology 138, 1310-1317.
    • (2005) Plant Physiology , vol.138 , pp. 1310-1317
    • Mueller, L.A.1    Solow, T.H.2    Taylor, N.3
  • 37
    • 0037343103 scopus 로고    scopus 로고
    • Laser-capture microdissection, a tool for the global analysis of gene expression in specific plant cell types: Identification of genes expressed differentially in epidermal cells or vascular tissues of maize
    • Nakazono M, Qiu F, Borsuk LA, Schnable PS. 2003. Laser-capture microdissection, a tool for the global analysis of gene expression in specific plant cell types: identification of genes expressed differentially in epidermal cells or vascular tissues of maize. The Plant Cell 15, 583-596.
    • (2003) The Plant Cell , vol.15 , pp. 583-596
    • Nakazono, M.1    Qiu, F.2    Borsuk, L.A.3    Schnable, P.S.4
  • 38
    • 34250813748 scopus 로고    scopus 로고
    • Crystal structures of human MD-2 and its complex with antiendotoxic lipid IVa
    • Ohto U, Fukase K, Miyake K, Satow Y. 2007. Crystal structures of human MD-2 and its complex with antiendotoxic lipid IVa. Science 316, 1632-1634.
    • (2007) Science , vol.316 , pp. 1632-1634
    • Ohto, U.1    Fukase, K.2    Miyake, K.3    Satow, Y.4
  • 39
    • 71049140000 scopus 로고    scopus 로고
    • The Arabidopsis DCR encoding a soluble BAHD acyltransferase is required for cutin polyester formation and seed hydration properties
    • Panikashvili D, Shi JX, Schreiber L, Aharoni A. 2009. The Arabidopsis DCR encoding a soluble BAHD acyltransferase is required for cutin polyester formation and seed hydration properties. Plant Physiology 151, 1773-1789.
    • (2009) Plant Physiology , vol.151 , pp. 1773-1789
    • Panikashvili, D.1    Shi, J.X.2    Schreiber, L.3    Aharoni, A.4
  • 40
    • 0033434080 scopus 로고    scopus 로고
    • Probability-based protein identification by searching sequence databases using mass spectrometry data
    • Perkins DN, Pappin DJ, Creasy DM, Cottrell JS. 1999. Probability-based protein identification by searching sequence databases using mass spectrometry data. Electrophoresis 20, 3551-3567.
    • (1999) Electrophoresis , vol.20 , pp. 3551-3567
    • Perkins, D.N.1    Pappin, D.J.2    Creasy, D.M.3    Cottrell, J.S.4
  • 41
    • 0036581160 scopus 로고    scopus 로고
    • Relative expression software tool (REST) for group-wise comparison and statistical analysis of relative expression results in real-time PCR
    • Pfaffl MW, Horgan GW, Dempfle L. 2002. Relative expression software tool (REST) for group-wise comparison and statistical analysis of relative expression results in real-time PCR. Nucleic Acids Research 30, e36.
    • (2002) Nucleic Acids Research , vol.30
    • Pfaffl, M.W.1    Horgan, G.W.2    Dempfle, L.3
  • 43
    • 0000229472 scopus 로고
    • Nucleotide sequence and spatial expression pattern of a drought-and abscisic acid-induced gene of tomato
    • Plant AL, Cohen A, Moses MS, Bray EA. 1991. Nucleotide sequence and spatial expression pattern of a drought-and abscisic acid-induced gene of tomato. Plant Physiology 97, 900-906.
    • (1991) Plant Physiology , vol.97 , pp. 900-906
    • Plant, A.L.1    Cohen, A.2    Moses, M.S.3    Bray, E.A.4
  • 45
    • 0028363877 scopus 로고
    • Identification of a lipid transfer protein as the major protein in the surface wax of broccoli (Brassica oleracea) leaves
    • Pyee J, Yu H, Kolattukudy PE. 1994. Identification of a lipid transfer protein as the major protein in the surface wax of broccoli (Brassica oleracea) leaves. Archives of Biochemistry and Biophysics 311, 460-468.
    • (1994) Archives of Biochemistry and Biophysics , vol.311 , pp. 460-468
    • Pyee, J.1    Yu, H.2    Kolattukudy, P.E.3
  • 47
    • 34247280079 scopus 로고    scopus 로고
    • Introduction: Biology of the plant cuticle
    • Riederer M, Mü ller C, eds Oxford: Blackwell
    • Riederer M. 2006. Introduction: biology of the plant cuticle. In: Riederer M, Mü ller C, eds. Biology of the plant cuticle. Oxford: Blackwell, 1-10.
    • (2006) Biology of the Plant Cuticle , pp. 1-10
    • Riederer, M.1
  • 48
    • 34848868765 scopus 로고    scopus 로고
    • Isolation, characterization, and localization of AgaSGNH cDNA: A new SGNH-motif plant hydrolase specific to Agave americana L. leaf epidermis
    • Reina JJ, Guerrero C, Heredia A. 2007. Isolation, characterization, and localization of AgaSGNH cDNA: a new SGNH-motif plant hydrolase specific to Agave americana L. leaf epidermis. Journal of Experimental Botany 58, 2717-2731.
    • (2007) Journal of Experimental Botany , vol.58 , pp. 2717-2731
    • Reina, J.J.1    Guerrero, C.2    Heredia, A.3
  • 50
    • 9444225935 scopus 로고    scopus 로고
    • Java Treeview\extensible visualization of microarray data
    • Saldanha AJ. 2004. Java Treeview\extensible visualization of microarray data. Bioinformatics 20, 3246-3248.
    • (2004) Bioinformatics , vol.20 , pp. 3246-3248
    • Saldanha, A.J.1
  • 51
    • 43049180903 scopus 로고    scopus 로고
    • Sealing plant surfaces: Cuticular wax formation by epidermal cells
    • Samuels L, Kunst L, Jetter R. 2008. Sealing plant surfaces: cuticular wax formation by epidermal cells. Annual Review of Plant Biology 59, 683-707.
    • (2008) Annual Review of Plant Biology , vol.59 , pp. 683-707
    • Samuels, L.1    Kunst, L.2    Jetter, R.3
  • 52
    • 0025737251 scopus 로고
    • Isolation of functional RNA from plant tissues rich in phenolic compounds
    • Schneiderbauer A, Sandermann HJ, Ernst D. 1991. Isolation of functional RNA from plant tissues rich in phenolic compounds. Analytical Biochemistry 197, 91-95.
    • (1991) Analytical Biochemistry , vol.197 , pp. 91-95
    • Schneiderbauer, A.1    Sandermann, H.J.2    Ernst, D.3
  • 53
    • 33846929422 scopus 로고    scopus 로고
    • Phylloplane proteins: Emerging defenses at the aerial frontline?
    • Shepherd RW, Wagner GJ. 2007. Phylloplane proteins: emerging defenses at the aerial frontline? Trends in Plant Science 12, 51-56.
    • (2007) Trends in Plant Science , vol.12 , pp. 51-56
    • Shepherd, R.W.1    Wagner, G.J.2
  • 54
    • 0029927505 scopus 로고    scopus 로고
    • Mass spectrometric sequencing of proteins silver-stained polyacrylamide gels
    • Shevchenko A, Wilm M, Vorm O, Mann M. 1996. Mass spectrometric sequencing of proteins silver-stained polyacrylamide gels. Analytical Chemistry 68, 850-858.
    • (1996) Analytical Chemistry , vol.68 , pp. 850-858
    • Shevchenko, A.1    Wilm, M.2    Vorm, O.3    Mann, M.4
  • 56
  • 57
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0
    • Tamura K, Dudley J, Nei M, Kumar S. 2007. MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Molecular Biology and Evolution 24, 1596-1599.
    • (2007) Molecular Biology and Evolution , vol.24 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 58
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson JD, Higgins DG, Gibson TJ. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Research 22, 4673-4680.
    • (1994) Nucleic Acids Research , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 59
    • 2942623793 scopus 로고    scopus 로고
    • Tomato fruit cuticular waxes and their effects on transpiration barrier properties: Functional characterization of a mutant deficient in a very-long-chain fatty acid b-ketoacyl-CoA synthase
    • Vogg G, Fischer S, Leide J, Emmanuel E, Jetter R, Levy AA, Riederer M. 2004. Tomato fruit cuticular waxes and their effects on transpiration barrier properties: functional characterization of a mutant deficient in a very-long-chain fatty acid b-ketoacyl-CoA synthase. Journal of Experimental Botany 55, 1401-1410.
    • (2004) Journal of Experimental Botany , vol.55 , pp. 1401-1410
    • Vogg, G.1    Fischer, S.2    Leide, J.3    Emmanuel, E.4    Jetter, R.5    Levy, A.A.6    Riederer, M.7
  • 60
    • 36049014914 scopus 로고    scopus 로고
    • A comparison of nLC-ESI-MS/MS and nLC-MALDI-MS/MS for GeLC-based protein identification and iTRAQ-based shotgun quantitative proteomics
    • Yang Y, Zhang S, Howe K, Wilson DB, Moser F, Irwin D, Thannhauser TW. 2007. A comparison of nLC-ESI-MS/MS and nLC-MALDI-MS/MS for GeLC-based protein identification and iTRAQ-based shotgun quantitative proteomics. Journal of Biomolecular Techniques 18, 226-237.
    • (2007) Journal of Biomolecular Techniques , vol.18 , pp. 226-237
    • Yang, Y.1    Zhang, S.2    Howe, K.3    Wilson, D.B.4    Moser, F.5    Irwin, D.6    Thannhauser, T.W.7
  • 61
    • 38649137238 scopus 로고    scopus 로고
    • The biochemistry and biology of extracellular plant lipid-transfer proteins (LTPs)
    • Yeats TH, Rose JKC. 2008. The biochemistry and biology of extracellular plant lipid-transfer proteins (LTPs). Protein Science 17, 191-198.
    • (2008) Protein Science , vol.17 , pp. 191-198
    • Yeats, T.H.1    Jkc, R.2


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