-
1
-
-
0028179011
-
Lipid-Anchored Influenza Hemagglutinin Promotes Hemifusion, Not Complete Fusion
-
Kemble GW, Danieli T, White JM (1994) Lipid-Anchored Influenza Hemagglutinin Promotes Hemifusion, Not Complete Fusion. Cell 76: 383-391.
-
(1994)
Cell
, vol.76
, pp. 383-391
-
-
Kemble, G.W.1
Danieli, T.2
White, J.M.3
-
2
-
-
0032812477
-
A specific point mutant at position 1 of the influenza hemagglutinin fusion peptide displays a hemifusion phenotype
-
Qiao H, Armstrong RT, Melikyan GB, Cohen FS, White JM (1999) A specific point mutant at position 1 of the influenza hemagglutinin fusion peptide displays a hemifusion phenotype. Mol Biol Cell 10: 2759-2769.
-
(1999)
Mol Biol Cell
, vol.10
, pp. 2759-2769
-
-
Qiao, H.1
Armstrong, R.T.2
Melikyan, G.B.3
Cohen, F.S.4
White, J.M.5
-
3
-
-
58549102514
-
Functional analysis of the transmembrane domain in paramyxovirus F proteinmediated membrane fusion
-
Bissonnette ML, Donald JE, DeGrado WF, Jardetzky TS, Lamb RA (2009) Functional analysis of the transmembrane domain in paramyxovirus F proteinmediated membrane fusion. J Mol Biol 386: 14-36.
-
(2009)
J Mol Biol
, vol.386
, pp. 14-36
-
-
Bissonnette, M.L.1
Donald, J.E.2
Degrado, W.F.3
Jardetzky, T.S.4
Lamb, R.A.5
-
5
-
-
0024395893
-
Stalk mechanism of vesicle fusion. Intermixing of aqueous contents
-
Kozlov MM, Leikin SL, Chernomordik LV, Markin VS, Chizmadzhev YA (1989) Stalk mechanism of vesicle fusion. Intermixing of aqueous contents. Eur Biophys J 17: 121-129.
-
(1989)
Eur Biophys J
, vol.17
, pp. 121-129
-
-
Kozlov, M.M.1
Leikin, S.L.2
Chernomordik, L.V.3
Markin, V.S.4
Chizmadzhev, Y.A.5
-
6
-
-
2142712534
-
Energetics of vesicle fusion intermediates: Comparison of calculations with observed effects of osmotic and curvature stresses
-
Malinin VS, Lentz BR (2004) Energetics of vesicle fusion intermediates: comparison of calculations with observed effects of osmotic and curvature stresses. Biophys J 86: 2951-2964.
-
(2004)
Biophys J
, vol.86
, pp. 2951-2964
-
-
Malinin, V.S.1
Lentz, B.R.2
-
7
-
-
33749525657
-
Conical electron tomography of a chemical synapse: Vesicles docked to the active zone are hemi-fused
-
Zampighi GA, Zampighi LM, Fain N, Lanzavecchia S, Simon SA, et al. (2006) Conical electron tomography of a chemical synapse: vesicles docked to the active zone are hemi-fused. Biophys J 91: 2910-2918.
-
(2006)
Biophys J
, vol.91
, pp. 2910-2918
-
-
Zampighi, G.A.1
Zampighi, L.M.2
Fain, N.3
Lanzavecchia, S.4
Simon, S.A.5
-
8
-
-
0027362739
-
Energetics of intermediates in membrane-fusion - Comparison of stalk and inverted micellar intermediate mechanisms
-
Siegel DP (1993) Energetics of Intermediates in Membrane-Fusion - Comparison of Stalk and Inverted Micellar Intermediate Mechanisms. Biophysical Journal 65: 2124-2140.
-
(1993)
Biophysical Journal
, vol.65
, pp. 2124-2140
-
-
Siegel, D.P.1
-
9
-
-
0037072603
-
Observation of a membrane fusion intermediate structure
-
Yang L, Huang HW (2002) Observation of a membrane fusion intermediate structure. Science 297: 1877-1879.
-
(2002)
Science
, vol.297
, pp. 1877-1879
-
-
Yang, L.1
Huang, H.W.2
-
10
-
-
0023662095
-
Membrane fusion: Overcoming of the hydration barrier and local restructuring
-
Leikin SL, Kozlov MM, Chernomordik LV, Markin VS, Chizmadzhev YA (1987) Membrane fusion: overcoming of the hydration barrier and local restructuring. J Theor Biol 129: 411-425.
-
(1987)
J Theor Biol
, vol.129
, pp. 411-425
-
-
Leikin, S.L.1
Kozlov, M.M.2
Chernomordik, L.V.3
Markin, V.S.4
Chizmadzhev, Y.A.5
-
11
-
-
34147092000
-
Point-like protrusion as a prestalk intermediate in membrane fusion pathway
-
Efrat A, Chernomordik LV, Kozlov MM (2007) Point-like protrusion as a prestalk intermediate in membrane fusion pathway. Biophys J 92: L61-63.
-
(2007)
Biophys J
, vol.92
-
-
Efrat, A.1
Chernomordik, L.V.2
Kozlov, M.M.3
-
13
-
-
0029148061
-
The hemifusion intermediate and its conversion to complete fusion - regulation by membrane-composition
-
Chernomordik L, Chanturiya A, Green J, Zimmerberg J (1995) The Hemifusion Intermediate and Its Conversion to Complete Fusion - Regulation by Membrane-Composition. Biophysical Journal 69: 922-929.
-
(1995)
Biophysical Journal
, vol.69
, pp. 922-929
-
-
Chernomordik, L.1
Chanturiya, A.2
Green, J.3
Zimmerberg, J.4
-
14
-
-
2942635759
-
The energetics of membrane fusion from binding, through hemifusion, pore formation, and pore enlargement
-
Cohen FS, Melikyan GB (2004) The energetics of membrane fusion from binding, through hemifusion, pore formation, and pore enlargement. J Membr Biol 199: 1-14.
-
(2004)
J Membr Biol
, vol.199
, pp. 1-14
-
-
Cohen, F.S.1
Melikyan, G.B.2
-
15
-
-
0041320883
-
A new mechanism of model membrane fusion determined from Monte Carlo simulation
-
Muller M, Katsov K, Schick M (2003) A new mechanism of model membrane fusion determined from Monte Carlo simulation. Biophys J 85: 1611-1623.
-
(2003)
Biophys J
, vol.85
, pp. 1611-1623
-
-
Muller, M.1
Katsov, K.2
Schick, M.3
-
16
-
-
0042193019
-
The mechanism of vesicle fusion as revealed by molecular dynamics simulations
-
Marrink SJ, Mark AE (2003) The mechanism of vesicle fusion as revealed by molecular dynamics simulations. Journal of the American Chemical Society 125: 11144-11145.
-
(2003)
Journal of the American Chemical Society
, vol.125
, pp. 11144-11145
-
-
Marrink, S.J.1
Mark, A.E.2
-
17
-
-
11044225076
-
Insights into the molecular mechanism of membrane fusion from simulation: Evidence for the association of splayed tails
-
Stevens MJ, Hoh JH, Woolf TB (2003) Insights into the molecular mechanism of membrane fusion from simulation: Evidence for the association of splayed tails. Physical Review Letters 91: 188102.
-
(2003)
Physical Review Letters
, vol.91
, pp. 188102
-
-
Stevens, M.J.1
Hoh, J.H.2
Woolf, T.B.3
-
18
-
-
14744297207
-
Tension-induced fusion of bilayer membranes and vesicles
-
Shillcock JC, Lipowsky R (2005) Tension-induced fusion of bilayer membranes and vesicles. Nature Materials 4: 225-228.
-
(2005)
Nature Materials
, vol.4
, pp. 225-228
-
-
Shillcock, J.C.1
Lipowsky, R.2
-
19
-
-
33747064957
-
Ensemble molecular dynamics yields sub-millisecond kinetics and intermediates of membrane fusion
-
Kasson P, Kelley N, Singhal N, Vrljic M, Brunger AT, et al. (2006) Ensemble molecular dynamics yields sub-millisecond kinetics and intermediates of membrane fusion. Proc Natl Acad Sci U S A 103: 11916-11921.
-
(2006)
Proc Natl Acad Sci U S A
, vol.103
, pp. 11916-11921
-
-
Kasson, P.1
Kelley, N.2
Singhal, N.3
Vrljic, M.4
Brunger, A.T.5
-
20
-
-
34250322707
-
Molecular dynamics simulations of lipid vesicle fusion in atomic detail
-
Knecht V, Marrink SJ (2007) Molecular dynamics simulations of lipid vesicle fusion in atomic detail. Biophys J 92: 4254-4261.
-
(2007)
Biophys J
, vol.92
, pp. 4254-4261
-
-
Knecht, V.1
Marrink, S.J.2
-
21
-
-
0022399994
-
Membrane fusion due to dehydration by polyethylene glycol, dextran, or sucrose
-
MacDonald RI (1985) Membrane fusion due to dehydration by polyethylene glycol, dextran, or sucrose. Biochemistry 24: 4058-4066.
-
(1985)
Biochemistry
, vol.24
, pp. 4058-4066
-
-
Macdonald, R.I.1
-
22
-
-
0028111739
-
Polymer-induced membrane fusion: Potential mechanism and relation to cell fusion events
-
Lentz BR (1994) Polymer-induced membrane fusion: potential mechanism and relation to cell fusion events. Chem Phys Lipids 73: 91-106.
-
(1994)
Chem Phys Lipids
, vol.73
, pp. 91-106
-
-
Lentz, B.R.1
-
23
-
-
0001563395
-
On the transition coordinate for protein folding
-
Du R, Pande VS, Grosberg AY, Tanaka T, Shakhnovich ES (1998) On the transition coordinate for protein folding. Journal of Chemical Physics 108: 334-350.
-
(1998)
Journal of Chemical Physics
, vol.108
, pp. 334-350
-
-
Du, R.1
Pande, V.S.2
Grosberg, A.Y.3
Tanaka, T.4
Shakhnovich, E.S.5
-
25
-
-
0003525155
-
-
New York: J. Wiley xiii
-
Brooks CL, Karplus M, Pettitt BM (1988) Proteins: a theoretical perspective of dynamics, structure, and thermodynamics. New York: J. Wiley xiii, 259.
-
(1988)
Proteins: A Theoretical Perspective of Dynamics, Structure, and Thermodynamics
, pp. 259
-
-
Brooks, C.L.1
Karplus, M.2
Pettitt, B.M.3
-
26
-
-
33750468665
-
Sampling the multiple folding mechanisms of Trpcage in explicit solvent
-
Juraszek J, Bolhuis PG (2006) Sampling the multiple folding mechanisms of Trpcage in explicit solvent. Proc Natl Acad Sci U S A 103: 15859-15864.
-
(2006)
Proc Natl Acad Sci U S A
, vol.103
, pp. 15859-15864
-
-
Juraszek, J.1
Bolhuis, P.G.2
-
30
-
-
0014601923
-
Lipid Composition of Synaptic Plasma Membranes Isolated from Rat Brain by Zonal Centrifugation
-
Cotman C, Blank ML, Moehl A, Snyder F (1969) Lipid Composition of Synaptic Plasma Membranes Isolated from Rat Brain by Zonal Centrifugation. Biochemistry 8: 4606-4612.
-
(1969)
Biochemistry
, vol.8
, pp. 4606-4612
-
-
Cotman, C.1
Blank, M.L.2
Moehl, A.3
Snyder, F.4
-
31
-
-
0345363228
-
Electrospray ionization tandem mass spectrometry (ESI-MS/MS) analysis of the lipid molecular species composition of yeast subcellular membranes reveals acyl chain-based sorting/remodeling of distinct molecular species en route to the plasma membrane
-
Schneiter R, Brugger B, Sandhoff R, Zellnig G, Leber A, et al. (1999) Electrospray ionization tandem mass spectrometry (ESI-MS/MS) analysis of the lipid molecular species composition of yeast subcellular membranes reveals acyl chain-based sorting/remodeling of distinct molecular species en route to the plasma membrane. J Cell Biol 146: 741-754.
-
(1999)
J Cell Biol
, vol.146
, pp. 741-754
-
-
Schneiter, R.1
Brugger, B.2
Sandhoff, R.3
Zellnig, G.4
Leber, A.5
-
32
-
-
0035836511
-
Influence of lipid composition on physical properties and PEG-mediated fusion of curved and uncurved model membrane vesicles: "Nature's own" fusogenic lipid bilayer
-
Haque ME, McIntosh TJ, Lentz BR (2001) Influence of lipid composition on physical properties and PEG-mediated fusion of curved and uncurved model membrane vesicles: "Nature's own" fusogenic lipid bilayer. Biochemistry 40: 4340-4348.
-
(2001)
Biochemistry
, vol.40
, pp. 4340-4348
-
-
Haque, M.E.1
McIntosh, T.J.2
Lentz, B.R.3
-
33
-
-
38949185790
-
Productive hemifusion intermediates in fast vesicle fusion driven by neuronal SNAREs
-
Liu T, Wang T, Chapman ER, Weisshaar JC (2008) Productive hemifusion intermediates in fast vesicle fusion driven by neuronal SNAREs. Biophys J 94: 1303-1314.
-
(2008)
Biophys J
, vol.94
, pp. 1303-1314
-
-
Liu, T.1
Wang, T.2
Chapman, E.R.3
Weisshaar, J.C.4
-
34
-
-
34249933061
-
How synaptotagmin promotes membrane fusion
-
Martens S, Kozlov MM, McMahon HT (2007) How synaptotagmin promotes membrane fusion. Science 316: 1205-1208.
-
(2007)
Science
, vol.316
, pp. 1205-1208
-
-
Martens, S.1
Kozlov, M.M.2
McMahon, H.T.3
-
35
-
-
68749083522
-
Synaptotagminmediated bending of the target membrane is a critical step in Ca(2+)-regulated fusion
-
Hui E, Johnson CP, Yao J, Dunning FM, Chapman ER (2009) Synaptotagminmediated bending of the target membrane is a critical step in Ca(2+)-regulated fusion. Cell 138: 709-721.
-
(2009)
Cell
, vol.138
, pp. 709-721
-
-
Hui, E.1
Johnson, C.P.2
Yao, J.3
Dunning, F.M.4
Chapman, E.R.5
-
36
-
-
0020482336
-
Minimal size phosphatidylcholine vesicles: Effects of radius of curvature on head group packing and conformation
-
Brouillette CG, Segrest JP, Ng TC, Jones JL (1982) Minimal size phosphatidylcholine vesicles: effects of radius of curvature on head group packing and conformation. Biochemistry 21: 4569-4575.
-
(1982)
Biochemistry
, vol.21
, pp. 4569-4575
-
-
Brouillette, C.G.1
Segrest, J.P.2
Ng, T.C.3
Jones, J.L.4
-
37
-
-
36949024736
-
Control of membrane fusion mechanism by lipid composition: Predictions from ensemble molecular dynamics
-
Kasson PM, Pande VS (2007) Control of membrane fusion mechanism by lipid composition: predictions from ensemble molecular dynamics. PLoS Comp Biol 3: e220-230.
-
(2007)
PLoS Comp Biol
, vol.3
-
-
Kasson, P.M.1
Pande, V.S.2
-
38
-
-
0004016501
-
Comparison of simple potential functions for simulating liquid water
-
Jorgensen WL, Chandrasekhar J, Madura JD, Impey RW, Klein ML (1983) Comparison of Simple Potential Functions for Simulating Liquid Water. Journal of Chemical Physics 79: 926-935.
-
(1983)
Journal of Chemical Physics
, vol.79
, pp. 926-935
-
-
Jorgensen, W.L.1
Chandrasekhar, J.2
Madura, J.D.3
Impey, R.W.4
Klein, M.L.5
-
39
-
-
0032549708
-
SNAREpins: Minimal machinery for membrane fusion
-
Weber T, Zemelman BV, McNew JA, Westermann B, Gmachl M, et al. (1998) SNAREpins: minimal machinery for membrane fusion. Cell 92: 759-772.
-
(1998)
Cell
, vol.92
, pp. 759-772
-
-
Weber, T.1
Zemelman, B.V.2
McNew, J.A.3
Westermann, B.4
Gmachl, M.5
-
40
-
-
33646831343
-
Fusion peptide of influenza hemagglutinin requires a fixed angle boomerang structure for activity
-
Lai AL, Park H, White JM, Tamm LK (2006) Fusion peptide of influenza hemagglutinin requires a fixed angle boomerang structure for activity. J Biol Chem 281: 5760-5770.
-
(2006)
J Biol Chem
, vol.281
, pp. 5760-5770
-
-
Lai, A.L.1
Park, H.2
White, J.M.3
Tamm, L.K.4
-
41
-
-
0017617172
-
Effect of a single cis double bond on the structures of a phospholipid bilayer
-
Seelig A, Seelig J (1977) Effect of a single cis double bond on the structures of a phospholipid bilayer. Biochemistry 16: 45-50.
-
(1977)
Biochemistry
, vol.16
, pp. 45-50
-
-
Seelig, A.1
Seelig, J.2
-
42
-
-
0034950491
-
Fast lipid disorientation at the onset of membrane fusion revealed by molecular dynamics simulations
-
Ohta-Iino S, Pasenkiewicz-Gierula M, Takaoka Y, Miyagawa H, Kitamura K, et al. (2001) Fast lipid disorientation at the onset of membrane fusion revealed by molecular dynamics simulations. Biophys J 81: 217-224.
-
(2001)
Biophys J
, vol.81
, pp. 217-224
-
-
Ohta-Iino, S.1
Pasenkiewicz-Gierula, M.2
Takaoka, Y.3
Miyagawa, H.4
Kitamura, K.5
-
43
-
-
11244328066
-
Plasticity of influenza haemagglutinin fusion peptides and their interaction with lipid bilayers
-
Vaccaro L, Cross KJ, Kleinjung J, Straus SK, Thomas DJ, et al. (2005) Plasticity of influenza haemagglutinin fusion peptides and their interaction with lipid bilayers. Biophys J 88: 25-36.
-
(2005)
Biophys J
, vol.88
, pp. 25-36
-
-
Vaccaro, L.1
Cross, K.J.2
Kleinjung, J.3
Straus, S.K.4
Thomas, D.J.5
-
44
-
-
38449089814
-
Predicting structure and dynamics of looselyordered protein complexes: Influenza hemagglutinin peptide
-
Kasson PM, Pande VS (2007) Predicting structure and dynamics of looselyordered protein complexes: influenza hemagglutinin peptide. Pacific Symposium on Biocomputing 12: 40-50.
-
(2007)
Pacific Symposium on Biocomputing
, vol.12
, pp. 40-50
-
-
Kasson, P.M.1
Pande, V.S.2
-
45
-
-
28144436374
-
Molecular dynamics simulations of the influenza hemagglutinin fusion peptide in micelles and bilayers: Conformational analysis of peptide and lipids
-
Lague P, Roux B, Pastor RW (2005) Molecular dynamics simulations of the influenza hemagglutinin fusion peptide in micelles and bilayers: conformational analysis of peptide and lipids. J Mol Biol 354: 1129-1141.
-
(2005)
J Mol Biol
, vol.354
, pp. 1129-1141
-
-
Lague, P.1
Roux, B.2
Pastor, R.W.3
-
46
-
-
3042857547
-
Bilayer conformation of fusion peptide of influenza virus hemagglutinin: A molecular dynamics simulation study
-
Huang Q, Chen CL, Herrmann A (2004) Bilayer conformation of fusion peptide of influenza virus hemagglutinin: a molecular dynamics simulation study. Biophys J 87: 14-22.
-
(2004)
Biophys J
, vol.87
, pp. 14-22
-
-
Huang, Q.1
Chen, C.L.2
Herrmann, A.3
-
47
-
-
0041428123
-
Membrane fusion: A structural perspective on the interplay of lipids and proteins
-
Tamm LK, Crane J, Kiessling V (2003) Membrane fusion: a structural perspective on the interplay of lipids and proteins. Curr Opin Struct Biol 13: 453-466.
-
(2003)
Curr Opin Struct Biol
, vol.13
, pp. 453-466
-
-
Tamm, L.K.1
Crane, J.2
Kiessling, V.3
-
48
-
-
0019350409
-
Relationship between presynaptic calcium current and postsynaptic potential in squid giant synapse
-
Llinas R, Steinberg IZ, Walton K (1981) Relationship between Presynaptic Calcium Current and Postsynaptic Potential in Squid Giant Synapse. Biophysical Journal 33: 323-351.
-
(1981)
Biophysical Journal
, vol.33
, pp. 323-351
-
-
Llinas, R.1
Steinberg, I.Z.2
Walton, K.3
-
49
-
-
70450235266
-
Single vesicle millisecond fusion kinetics reveals number of SNARE complexes optimal for fast SNARE-mediated membrane fusion
-
Domanska MK, Kiessling V, Stein A, Fasshauer D, Tamm LK (2009) Single vesicle millisecond fusion kinetics reveals number of SNARE complexes optimal for fast SNARE-mediated membrane fusion. J Biol Chem 284: 32158-32166.
-
(2009)
J Biol Chem
, vol.284
, pp. 32158-32166
-
-
Domanska, M.K.1
Kiessling, V.2
Stein, A.3
Fasshauer, D.4
Tamm, L.K.5
-
50
-
-
25844484158
-
SNAREdriven, 25-millisecond vesicle fusion in vitro
-
Liu T, Tucker WC, Bhalla A, Chapman ER, Weisshaar JC (2005) SNAREdriven, 25-millisecond vesicle fusion in vitro. Biophys J 89: 2458-2472.
-
(2005)
Biophys J
, vol.89
, pp. 2458-2472
-
-
Liu, T.1
Tucker, W.C.2
Bhalla, A.3
Chapman, E.R.4
Weisshaar, J.C.5
-
51
-
-
34447311691
-
Rapid membrane fusion of individual virus particles with supported lipid bilayers
-
Wessels L, Elting MW, Scimeca D, Weninger K (2007) Rapid membrane fusion of individual virus particles with supported lipid bilayers. Biophys J 93: 526-538.
-
(2007)
Biophys J
, vol.93
, pp. 526-538
-
-
Wessels, L.1
Elting, M.W.2
Scimeca, D.3
Weninger, K.4
-
52
-
-
55749106791
-
Singleparticle kinetics of influenza virus membrane fusion
-
Floyd D, Ragains JR, Skehel JJ, Harrison SC, van Oijen AM (2008) Singleparticle kinetics of influenza virus membrane fusion. Proceedings of the National Academy of Sciences 105: 15382-15387.
-
(2008)
Proceedings of The National Academy of Sciences
, vol.105
, pp. 15382-15387
-
-
Floyd, D.1
Ragains, J.R.2
Skehel, J.J.3
Harrison, S.C.4
van Oijen, A.M.5
-
53
-
-
77955486883
-
Molecular mechanism of the synaptotagmin-SNARE interaction in Ca2+-triggered vesicle fusion
-
in press
-
Vrljic M, Strop P, Ernst JA, Sutton RB, Chu S, et al. (2009) Molecular mechanism of the synaptotagmin-SNARE interaction in Ca2+-triggered vesicle fusion. Nature Structural Biology: in press.
-
(2009)
Nature Structural Biology
-
-
Vrljic, M.1
Strop, P.2
Ernst, J.A.3
Sutton, R.B.4
Chu, S.5
-
54
-
-
0030999097
-
Molecular dynamics simulations of a fluid bilayer of dipalmitoylphosphatidylcholine at full hydration, constant pressure, and constant temperature
-
Berger O, Edholm O, Jahnig F (1997) Molecular dynamics simulations of a fluid bilayer of dipalmitoylphosphatidylcholine at full hydration, constant pressure, and constant temperature. Biophys J 72: 2002-2013.
-
(1997)
Biophys J
, vol.72
, pp. 2002-2013
-
-
Berger, O.1
Edholm, O.2
Jahnig, F.3
-
55
-
-
46249092554
-
GROMACS 4: Algorithms for highly efficient, load-balanced, and scalable molecular simulation
-
Hess B, Kutzner C, van der Spoel D, Lindahl E (2008) GROMACS 4: Algorithms for highly efficient, load-balanced, and scalable molecular simulation. Journal of Chemical Theory and Computation 4: 435-447.
-
(2008)
Journal of Chemical Theory and Computation
, vol.4
, pp. 435-447
-
-
Hess, B.1
Kutzner, C.2
van der Spoel, D.3
Lindahl, E.4
-
56
-
-
33846086933
-
Canonical sampling through velocity rescaling
-
Bussi G, Donadio D, Parrinello M (2007) Canonical sampling through velocity rescaling. J Chem Phys 126: 014101.
-
(2007)
J Chem Phys
, vol.126
, pp. 014101
-
-
Bussi, G.1
Donadio, D.2
Parrinello, M.3
-
57
-
-
38749123962
-
P-LINCS: A parallel linear constraint solver for molecular simulation
-
Hess B (2008) P-LINCS: a parallel linear constraint solver for molecular simulation. J Chem Theory Comput 4: 116-122.
-
(2008)
J Chem Theory Comput
, vol.4
, pp. 116-122
-
-
Hess, B.1
-
58
-
-
33846823909
-
Particle mesh ewald - an N.Log(N) method for ewald sums in large systems
-
Darden T, York D, Pedersen L (1993) Particle Mesh Ewald - an N.Log(N) Method for Ewald Sums in Large Systems. Journal of Chemical Physics 98: 10089-10092.
-
(1993)
Journal of Chemical Physics
, vol.98
, pp. 10089-10092
-
-
Darden, T.1
York, D.2
Pedersen, L.3
-
59
-
-
77950106854
-
Implementation of the CHARMM force field in GROMACS: Analysis of protein stability effects from correction maps, virtual interaction sites, and water models
-
Bjelkmar P, Larsson P, Cuendet MA, Hess B, Lindahl E (2010) Implementation of the CHARMM Force Field in GROMACS: Analysis of Protein Stability Effects from Correction Maps, Virtual Interaction Sites, and Water Models. Journal of Chemical Theory and Computation 6: 459-466.
-
(2010)
Journal of Chemical Theory and Computation
, vol.6
, pp. 459-466
-
-
Bjelkmar, P.1
Larsson, P.2
Cuendet, M.A.3
Hess, B.4
Lindahl, E.5
-
60
-
-
0034892952
-
Membrane structure and fusion-triggering conformational change of the fusion domain from influenza hemagglutinin
-
Han X, Bushweller JH, Cafiso DS, Tamm LK (2001) Membrane structure and fusion-triggering conformational change of the fusion domain from influenza hemagglutinin. Nat Struct Biol 8: 715-720.
-
(2001)
Nat Struct Biol
, vol.8
, pp. 715-720
-
-
Han, X.1
Bushweller, J.H.2
Cafiso, D.S.3
Tamm, L.K.4
-
61
-
-
0242663237
-
A point-charge force field for molecular mechanics simulations of proteins based on condensedphase quantum-mechanical calculations
-
Duan Y, Wu C, Chowdhury S, Lee MC, Xiong G, et al. (2003) A point-charge force field for molecular mechanics simulations of proteins based on condensedphase quantum-mechanical calculations. Journal of Computational Chemistry 24: 1999-2012.
-
(2003)
Journal of Computational Chemistry
, vol.24
, pp. 1999-2012
-
-
Duan, Y.1
Wu, C.2
Chowdhury, S.3
Lee, M.C.4
Xiong, G.5
-
62
-
-
58149242730
-
Structure of a potentially open state of a protonactivated pentameric ligand-gated ion channel
-
Hilf RJC, Dutzler R (2009) Structure of a potentially open state of a protonactivated pentameric ligand-gated ion channel. Nature 457: 115-118.
-
(2009)
Nature
, vol.457
, pp. 115-118
-
-
Hilf, R.J.C.1
Dutzler, R.2
-
63
-
-
0034623787
-
Computing - Screen savers of the world unite!
-
Shirts M, Pande VS (2000) Computing - Screen savers of the world unite! Science 290: 1903-1904.
-
(2000)
Science
, vol.290
, pp. 1903-1904
-
-
Shirts, M.1
Pande, V.S.2
-
64
-
-
0004014257
-
-
Department of Biochemistry and Molecular Biology, University College London
-
Hubbard SJ, Thornton J NACCESS. Department of Biochemistry and Molecular Biology, University College London.
-
NACCESS
-
-
Hubbard, S.J.1
Thornton, J.2
|